Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00599 ATGGCATCTGCCATGGCCAAACCCAAAACCCAGACAAAGCTCACCCGACAAACCCATGAAAACCAGAAACCAAAGCCGCCGTCTTGGGCGGTTGTTAGAGGCATATTCAGCTGCAAGTACCTGCAGCCTCAGCAGCCACAAGAAAAACGACAACAACAGGAGCAAACAACAGAAGAGAGTAGGAAGAACTGTAAGAAAATGAGGTGTTCCGGCTCACTCTGTAACAACACCAAGGTAACGCACGAAGTTCACAAGAACAGGGCATTATCTTCAAGTTCAAGTAGATACTCAAAAGCTCCTCCATTGAACGAACAAAATGGTATTCCATCAGCCACTTGTTCATCATTATCTGCATCATCTTCTTCCAATTCCTCTAGTGGAGCCTCTTTCAGGGGAATGCCATTCAGAAAGTTCTACGGCTGCTATGAATGTAAAATGGTGATTAACCCTGTTAATGGGATGGCTAGAGACCCTTTTCTTAGAGCAACCATTTGGCCCTGTTCTGAATGTGGTGAGGTTTTCATGAAACCTGAAGCTTTGGAGCTTCACAAGAGTGTTAGACATGCAGTGTCTGAACTTGGTCCTGAAGACACGAGCAAGAACATAGTGGAGATTATATTTCAATCAAGCTGGTTGAAAAAACAAACCCCAATTTGCAAAATTGAAAGGATTTTGAAAATCCACAACACTTCAAAAACCATCTCGAGATTCGAGGAATACAGGGACTCCATTAAAGGCAAAGCCATCAAGCTTTCAAAGAAGCACCCACGTTGCATAGCAGATGGTAACGAACTCCTGAGGTTCCATTGCACGACGTTGGCTTGCTCATTGGGCCTAAATGGCTCTTCTAACCTCTGTAGTTCAATCCCACAATGCAATGTTTGTAGTATAATCAAGCATGGGTTCAAGGTGGCTGCAGAGGCCACTGGAGGGGACGCAGGGAAGGGTATTCTAACAACTGCTACAAGTGGAAAGGCTCATGACAGTGCTGGAATGTCATTGGACGGCAAAGACAAACGAGCAATGCTGGTTTGTCGGGTAATTGCTGGCAGGGTTAAGAAGAGTTCAGAAAGCAGCGTGGAGGATTATGACTCTTTGGCCGGAGAAGCTGGCCTGTATTCCAATCTGGATGAGTTATATGTGTTCAGTCCCAAGGCAATATTGCCTTGTTTTGTTGTCATTTATGGTGGGTTTTAA 1197 44.86 MASAMAKPKTQTKLTRQTHENQKPKPPSWAVVRGIFSCKYLQPQQPQEKRQQQEQTTEESRKNCKKMRCSGSLCNNTKVTHEVHKNRALSSSSSRYSKAPPLNEQNGIPSATCSSLSASSSSNSSSGASFRGMPFRKFYGCYECKMVINPVNGMARDPFLRATIWPCSECGEVFMKPEALELHKSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKIHNTSKTISRFEEYRDSIKGKAIKLSKKHPRCIADGNELLRFHCTTLACSLGLNGSSNLCSSIPQCNVCSIIKHGFKVAAEATGGDAGKGILTTATSGKAHDSAGMSLDGKDKRAMLVCRVIAGRVKKSSESSVEDYDSLAGEAGLYSNLDELYVFSPKAILPCFVVIYGGF 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5862624 5864675 + Cp4.1LG13g04790.1 Cpe13g00599 479797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00599 398 MobiDBLite consensus disorder prediction 1 62 - -
Cpe13g00599 398 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 395 - -
Cpe13g00599 398 MobiDBLite consensus disorder prediction 86 129 - -
Cpe13g00599 398 ProSiteProfiles Zinc finger C2H2 type domain profile. 165 193 IPR013087 -
Cpe13g00599 398 MobiDBLite consensus disorder prediction 84 129 - -
Cpe13g00599 398 Gene3D - 189 396 - -
Cpe13g00599 398 SUPERFAMILY ADP-ribosylation 190 396 - -
Cpe13g00599 398 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 395 - -
Cpe13g00599 398 ProSitePatterns Zinc finger C2H2 type domain signature. 167 188 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00074 Cpe-Chr2:377882 Cpe13g00599 Cpe-Chr13:5862624 1.89E-18 dispersed
Cpe05g00241 Cpe-Chr5:1364866 Cpe13g00599 Cpe-Chr13:5862624 6.16E-33 dispersed
Cpe06g00072 Cpe-Chr6:351484 Cpe13g00599 Cpe-Chr13:5862624 2.85E-95 dispersed
Cpe13g00225 Cpe-Chr13:1701938 Cpe13g00599 Cpe-Chr13:5862624 1.10E-11 dispersed
Cpe05g00957 Cpe-Chr5:6245315 Cpe13g00599 Cpe-Chr13:5862624 9.89E-65 transposed
Cpe01g02031 Cpe-Chr1:17281073 Cpe13g00599 Cpe-Chr13:5862624 7.88E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50421 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00599 - - bhj:120067077 626.706