Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe13g00599 | ATGGCATCTGCCATGGCCAAACCCAAAACCCAGACAAAGCTCACCCGACAAACCCATGAAAACCAGAAACCAAAGCCGCCGTCTTGGGCGGTTGTTAGAGGCATATTCAGCTGCAAGTACCTGCAGCCTCAGCAGCCACAAGAAAAACGACAACAACAGGAGCAAACAACAGAAGAGAGTAGGAAGAACTGTAAGAAAATGAGGTGTTCCGGCTCACTCTGTAACAACACCAAGGTAACGCACGAAGTTCACAAGAACAGGGCATTATCTTCAAGTTCAAGTAGATACTCAAAAGCTCCTCCATTGAACGAACAAAATGGTATTCCATCAGCCACTTGTTCATCATTATCTGCATCATCTTCTTCCAATTCCTCTAGTGGAGCCTCTTTCAGGGGAATGCCATTCAGAAAGTTCTACGGCTGCTATGAATGTAAAATGGTGATTAACCCTGTTAATGGGATGGCTAGAGACCCTTTTCTTAGAGCAACCATTTGGCCCTGTTCTGAATGTGGTGAGGTTTTCATGAAACCTGAAGCTTTGGAGCTTCACAAGAGTGTTAGACATGCAGTGTCTGAACTTGGTCCTGAAGACACGAGCAAGAACATAGTGGAGATTATATTTCAATCAAGCTGGTTGAAAAAACAAACCCCAATTTGCAAAATTGAAAGGATTTTGAAAATCCACAACACTTCAAAAACCATCTCGAGATTCGAGGAATACAGGGACTCCATTAAAGGCAAAGCCATCAAGCTTTCAAAGAAGCACCCACGTTGCATAGCAGATGGTAACGAACTCCTGAGGTTCCATTGCACGACGTTGGCTTGCTCATTGGGCCTAAATGGCTCTTCTAACCTCTGTAGTTCAATCCCACAATGCAATGTTTGTAGTATAATCAAGCATGGGTTCAAGGTGGCTGCAGAGGCCACTGGAGGGGACGCAGGGAAGGGTATTCTAACAACTGCTACAAGTGGAAAGGCTCATGACAGTGCTGGAATGTCATTGGACGGCAAAGACAAACGAGCAATGCTGGTTTGTCGGGTAATTGCTGGCAGGGTTAAGAAGAGTTCAGAAAGCAGCGTGGAGGATTATGACTCTTTGGCCGGAGAAGCTGGCCTGTATTCCAATCTGGATGAGTTATATGTGTTCAGTCCCAAGGCAATATTGCCTTGTTTTGTTGTCATTTATGGTGGGTTTTAA | 1197 | 44.86 | MASAMAKPKTQTKLTRQTHENQKPKPPSWAVVRGIFSCKYLQPQQPQEKRQQQEQTTEESRKNCKKMRCSGSLCNNTKVTHEVHKNRALSSSSSRYSKAPPLNEQNGIPSATCSSLSASSSSNSSSGASFRGMPFRKFYGCYECKMVINPVNGMARDPFLRATIWPCSECGEVFMKPEALELHKSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKIHNTSKTISRFEEYRDSIKGKAIKLSKKHPRCIADGNELLRFHCTTLACSLGLNGSSNLCSSIPQCNVCSIIKHGFKVAAEATGGDAGKGILTTATSGKAHDSAGMSLDGKDKRAMLVCRVIAGRVKKSSESSVEDYDSLAGEAGLYSNLDELYVFSPKAILPCFVVIYGGF | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 5862624 | 5864675 | + | Cp4.1LG13g04790.1 | Cpe13g00599 | 479797 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe13g00599 | 398 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Cpe13g00599 | 398 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 28 | 395 | - | - | |
Cpe13g00599 | 398 | MobiDBLite | consensus disorder prediction | 86 | 129 | - | - | |
Cpe13g00599 | 398 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 165 | 193 | IPR013087 | - | |
Cpe13g00599 | 398 | MobiDBLite | consensus disorder prediction | 84 | 129 | - | - | |
Cpe13g00599 | 398 | Gene3D | - | 189 | 396 | - | - | |
Cpe13g00599 | 398 | SUPERFAMILY | ADP-ribosylation | 190 | 396 | - | - | |
Cpe13g00599 | 398 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 28 | 395 | - | - | |
Cpe13g00599 | 398 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 167 | 188 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00074 | Cpe-Chr2:377882 | Cpe13g00599 | Cpe-Chr13:5862624 | 1.89E-18 | dispersed | |
Cpe05g00241 | Cpe-Chr5:1364866 | Cpe13g00599 | Cpe-Chr13:5862624 | 6.16E-33 | dispersed | |
Cpe06g00072 | Cpe-Chr6:351484 | Cpe13g00599 | Cpe-Chr13:5862624 | 2.85E-95 | dispersed | |
Cpe13g00225 | Cpe-Chr13:1701938 | Cpe13g00599 | Cpe-Chr13:5862624 | 1.10E-11 | dispersed | |
Cpe05g00957 | Cpe-Chr5:6245315 | Cpe13g00599 | Cpe-Chr13:5862624 | 9.89E-65 | transposed | |
Cpe01g02031 | Cpe-Chr1:17281073 | Cpe13g00599 | Cpe-Chr13:5862624 | 7.88E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50421 | None | None | None | None | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe13g00599 | - | - | bhj:120067077 | 626.706 |