Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe13g00635 | ATGTCCGCTCATAATCGCCGCCCGTCGTTTTCGTCGTCGACGTCGTCGTCGTTGGCTAAACGACAAGCGTCGTCGGCCTCGTCGTCCGATAATGTCGGAAAGGTTGTGGCAGTTCCGCCACACTTGGCGAAGAAGCGAGCGCCACTCGGTAACCTAACGAATCTCAAGAGTGTGTCTCATACTGCTGCTAAAAGCTCTGTTCCGCCTGCTATTATGGTGCCTTGTGCAACCAAAGCTGTCAAGGCAAGGAAGAGTTCCCCTGCTAGAACTCGCATTGCTAACTTGCCGGCGGCGGCTCATACAGCTACATTGATTGATGTCAAAACGACGAATTCAATTGTCCCTAGCAATGTTCCAGCAATCTCAAGAACTGATGCCACCGCCGTCTCTAGTAGTATGGATGTCTCTCCGACTAAATCAGATGGAGTGTCACTTTCCTTAGATGAAACTATGTCTACTTGTGATTCTTTTAAGAGTCCTGACGTTGAGTACATGGACAATACTGATGTCCCAGCCGTTGATTCCGTTGAGAGGAAAACTAAAGCCAGTCTCTGCATTTCAGGTCACCCACCAATTAAAGGTAGCATATGCAATAGAGATGCACTTGCAGAAATGGAAACAGATAGCGATATCATTGATGTTGATACCGATTTCATGGATCCCCAGCAATGTGCTACAATTGCTTGTGATATTTACAAGCACTTGCGAGCATCTGAGGCTAAGAAAAGGCCTTCTACAGATTTCATGGAGAAAATTCAGAAGGATGTAAATTCAAATATGCGTGCCATACTGATTGATTGGCTTGTGGAGGTAGCAGAAGAGTATAGGCTTGTGCCAGATACTTTATATTTGACAGTGAACTACATCGATCGATACCTATCGGGAAACTCGATGGATCGACAACGATTACAGTTGCTTGGTGTTGCTTGCATGATGATTGCTTCAAAATATGAAGAGATCTGTGCACCTCAAGTGGAAGAATTTTGTTACATAACTGATAACACCTACTTCAAAGAAGAGGTATTGCAAATGGAATCTTCTGTCTTGAATTACTTGAAGTTTGAAATGACAGCTCCAACACCGAAATGTTTCTTAAGGCGATTTGTTCGAGCTGCTCAAGGGTCCACCGATGAGGTTTCGTCGATGCAGCTGGAATGCTTGTCCAACTTCCTAGCTGAATTATCTCTTTTGGAATACAGTATGCTATGCTACGCACCGTCGCTCGTAGCTGCGTCGGCGATCTTCTTGGCGAAGTTCATACTTGTTCCAACCAAAAGACCATGGAACTCGACCTTGCAGCATTATACACATTATCAGCCATCCGACCTTGTCGAGTGCGTCAAGGATTTACATCGCCTCTGCTGTAACGCCCACAATTCTAGCTTACCAGCCATCAGAGAGAAATACAGCCAGCATAAGTACAAGCACGTGGCGAAGAAGTATTGCCCTCCGACGATACCGCCCGAGTTTTTCCAGACTCAAACACAGTAG | 1491 | 45.67 | MSAHNRRPSFSSSTSSSLAKRQASSASSSDNVGKVVAVPPHLAKKRAPLGNLTNLKSVSHTAAKSSVPPAIMVPCATKAVKARKSSPARTRIANLPAAAHTATLIDVKTTNSIVPSNVPAISRTDATAVSSSMDVSPTKSDGVSLSLDETMSTCDSFKSPDVEYMDNTDVPAVDSVERKTKASLCISGHPPIKGSICNRDALAEMETDSDIIDVDTDFMDPQQCATIACDIYKHLRASEAKKRPSTDFMEKIQKDVNSNMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNSMDRQRLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPTPKCFLRRFVRAAQGSTDEVSSMQLECLSNFLAELSLLEYSMLCYAPSLVAASAIFLAKFILVPTKRPWNSTLQHYTHYQPSDLVECVKDLHRLCCNAHNSSLPAIREKYSQHKYKHVAKKYCPPTIPPEFFQTQTQ | 496 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 6074518 | 6084525 | + | Cp4.1LG13g04500.1 | Cpe13g00635 | 479833 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe13g00635 | 496 | CDD | CYCLIN | 260 | 349 | IPR013763 | - | |
Cpe13g00635 | 496 | SUPERFAMILY | Cyclin-like | 220 | 356 | IPR036915 | - | |
Cpe13g00635 | 496 | PANTHER | CYCLIN-A1-1 | 34 | 494 | - | - | |
Cpe13g00635 | 496 | ProSitePatterns | Cyclins signature. | 261 | 292 | IPR006671 | - | |
Cpe13g00635 | 496 | SMART | Cyclin_C_2 | 359 | 483 | IPR004367 | - | |
Cpe13g00635 | 496 | PIRSF | Cyclin_A_B_D_E | 5 | 490 | IPR039361 | - | |
Cpe13g00635 | 496 | Pfam | Cyclin, N-terminal domain | 230 | 356 | IPR006671 | - | |
Cpe13g00635 | 496 | Gene3D | - | 230 | 479 | - | - | |
Cpe13g00635 | 496 | Coils | Coil | 495 | 496 | - | - | |
Cpe13g00635 | 496 | SUPERFAMILY | Cyclin-like | 359 | 486 | IPR036915 | - | |
Cpe13g00635 | 496 | PANTHER | CYCLINS | 34 | 494 | IPR039361 | - | |
Cpe13g00635 | 496 | Gene3D | - | 244 | 357 | - | - | |
Cpe13g00635 | 496 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cpe13g00635 | 496 | SMART | cyclin_7 | 266 | 350 | IPR013763 | - | |
Cpe13g00635 | 496 | SMART | cyclin_7 | 363 | 452 | IPR013763 | - | |
Cpe13g00635 | 496 | CDD | CYCLIN | 357 | 451 | IPR013763 | - | |
Cpe13g00635 | 496 | Pfam | Cyclin, C-terminal domain | 359 | 479 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00070 | Cpe-Chr1:418597 | Cpe13g00635 | Cpe-Chr13:6074518 | 1.41E-20 | dispersed | |
Cpe01g00949 | Cpe-Chr1:5618065 | Cpe13g00635 | Cpe-Chr13:6074518 | 2.22E-18 | dispersed | |
Cpe02g00206 | Cpe-Chr2:1058884 | Cpe13g00635 | Cpe-Chr13:6074518 | 1.73E-103 | dispersed | |
Cpe06g00185 | Cpe-Chr6:995417 | Cpe13g00635 | Cpe-Chr13:6074518 | 1.27E-104 | dispersed | |
Cpe07g00503 | Cpe-Chr7:3300135 | Cpe13g00635 | Cpe-Chr13:6074518 | 8.70E-102 | dispersed | |
Cpe11g00133 | Cpe-Chr11:725289 | Cpe13g00635 | Cpe-Chr13:6074518 | 1.16E-99 | dispersed | |
Cpe12g00714 | Cpe-Chr12:6723254 | Cpe13g00635 | Cpe-Chr13:6074518 | 3.49E-106 | dispersed | |
Cpe13g00635 | Cpe-Chr13:6074518 | Cpe17g00601 | Cpe-Chr17:4969863 | 1.80E-103 | dispersed | |
Cpe01g02068 | Cpe-Chr1:17525206 | Cpe13g00635 | Cpe-Chr13:6074518 | 2.95E-150 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe13g00635 | K06627 | - | csv:101221569 | 882.478 |