Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00659 ATGGCAACATCGGGGCCACCCACCCCTATGGGTGGCGGTGCACAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGATAGGAATTCAAGGGGGTCTGCAGCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCTCGCAATCAGTTCAATAATATGAATATGGTCGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGAAATGGGGCTCCTAATTCTGGACTTCCATGTCCTGGCAGTAGCCACACTGGTGCGGAGCCAGATCCCCTTTCCGGTGTTGGCAATGGAACGAGCTTTAATAATCCTTCATCATCATTTGTAGCATCCAATATGACAAACCCTGTTTCGTCCGTTCAGGGGCATAATCCACAATTTTCTAACCTTTCTAGCAGTCAGATGTTATCAGATCAACAGCAGTCGCAACAGCTAGAGCCCCAGAACTTCCAACATAGTCAACAGTCTATGGAACAGTTTTCTGCACATCAGAGCAATCAACAACCACAATTTCATGCAATTCGAGGGTTGAATGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGCGACCAGCAATGATCAACTTGGACAGCAGCAGCAGCAGCATTTGCAAACGTTGAGAAACCTTGTTCCTGTGAAATTGGAATCACAAAGACTTCAGTCACTGAGAGGTTTGACACCAGTTAAAATGGAACCCCAACTATCGGACCAGTCATTATTTCTGCAGCAGCAGCAGCAGCATCAACTACAACAACCACAATCGCAACAATTTCTCCATATGTCTAGACAGCCCTCTCAGGCAGCGGCTGCTCAAATTAATCTAATGCACCAACAAAGGCTTTTGCAATTGCAACAACAACATCAGCAACAACATCTCTTAAAAAGTATGCCTCCTCAACGGCCACAATTGCAACAACATTATCAACAGCAGAACCTTTCTCTGAGATCTCCTGTAAAACCAGGATATGAACCTGGAATGTGTGCCCGGCGTCTGACTCATTACATGTATCACCAGCAACACAGACCTGAAGACAACAATATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCCCATGCCAAGAAGAAGTGGTGCGTTTCCATGTATGGAAGTGGGCGACAAACAACTGGCGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGCAACCGCAAGCCTGGGCGTGGCTTTGAAGCAACTGCTGAAGTTCTTCCCAGACTTTTTAAGATCAAGTATGAAAGTGGTACAATGGAGGAACTACTGTACCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATTGTCCTGGATTATGCAAAAGCGATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGCTCATGGGAATTCTGTGCTCGACGGCATGAGGAACTTATACCTAGGAGATTATTGATACCTCAGGTTAGCCACCTTGGAGCGGCAGCTCAAAAGTACCAGTCTGCCATTCAAAACGCATCATCCAATTTATCAACTCCTGAATTGCAAAACAATTGTAACATGTTTGTGGCTTCAGCACGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATACGTACGTTGTCTACAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAGCAAGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCAGTGCTTACAAATCATGCTCAAGTTTCTAATGAGCAGCAACAACAGCAATCATCCATAGCCCATCACTCAAATAACAACCAGGGTCCTGTCCAGGCTTCTGCAGTGCAGCTTACGGGTAGCAATGGCGTGGCCAGTGTAAATAACATGGCCAACCAACCCTCAACATCAAACTCAGCGAGCACCATTGCTGGGCTTCTTCACCAGAATTCTATTAATTCCAGACAGCAGAACTCTTTGGCTGATGCTAGCAACTCATATGGGGGAAGTTCTGTTCAGATTCCATCTCCTGGTTCTTCCAGTACAATTCCACCTACGCAACTGAACCCTTCTACATTCCAGCCACCGACACCTTCATCATCTAACAATCTTTCACAACTATCGCATGCAGCTGTGAGGAATGGCAATCAGATGAGTGCTGCTAATTCTCCGGCAAATGTCTCTATACAACAACCTGCCTTATCTGGAGATGCTGATCCTAGTGATACACAGTCCTCCGTGCAAAAGATCTTACAAGAGATGATGATGAATAATCAAATGAATAGTCCGACAAGTCTGGTTGGTGTTGGTTCGGTGGTCAATGATATGAAAAACGTGAATGGGGTCTTACCTACAAGTAATCCAGGTCTCAACAACGGGAATTGTATTGGGGGAAACGGAGCAACCAACAGTGGCTCAGGAATGGGAGGAGGTGGATATGGATCAATGGGGAGTGGGCTTGGTCAGCCTGCCATGGTTAATGGAATGAGGACTGCAATGGGAAATAACTCCATTATGAACAGACGAATAGGAATGGCATCGCTCGCTCTTGAACAAAGCATGAATGGTCAACAACCGCAGGATATGGGAAACCAGCTTCTTAGTGGACTAGGAGCTGTGAATGGCTTTAGTAATCTCCAATTCGACTGGAAGCCGTCCCCATGA 2718 45.18 MATSGPPTPMGGGAQSVSPSLLRSNSGLIGIQGGLQPSQAAFSSLVSPRNQFNNMNMVGNMSNVSSLLNQSFGNGAPNSGLPCPGSSHTGAEPDPLSGVGNGTSFNNPSSSFVASNMTNPVSSVQGHNPQFSNLSSSQMLSDQQQSQQLEPQNFQHSQQSMEQFSAHQSNQQPQFHAIRGLNGVGPVKLEPQATSNDQLGQQQQQHLQTLRNLVPVKLESQRLQSLRGLTPVKMEPQLSDQSLFLQQQQQHQLQQPQSQQFLHMSRQPSQAAAAQINLMHQQRLLQLQQQHQQQHLLKSMPPQRPQLQQHYQQQNLSLRSPVKPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKEARIGPMDSLAKFPRRTSSSSVLTNHAQVSNEQQQQQSSIAHHSNNNQGPVQASAVQLTGSNGVASVNNMANQPSTSNSASTIAGLLHQNSINSRQQNSLADASNSYGGSSVQIPSPGSSSTIPPTQLNPSTFQPPTPSSSNNLSQLSHAAVRNGNQMSAANSPANVSIQQPALSGDADPSDTQSSVQKILQEMMMNNQMNSPTSLVGVGSVVNDMKNVNGVLPTSNPGLNNGNCIGGNGATNSGSGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNRRIGMASLALEQSMNGQQPQDMGNQLLSGLGAVNGFSNLQFDWKPSP 905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6223255 6231705 - Cp4.1LG13g04220.1 Cpe13g00659 479857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00659 905 MobiDBLite consensus disorder prediction 587 629 - -
Cpe13g00659 905 MobiDBLite consensus disorder prediction 99 172 - -
Cpe13g00659 905 MobiDBLite consensus disorder prediction 673 722 - -
Cpe13g00659 905 MobiDBLite consensus disorder prediction 591 629 - -
Cpe13g00659 905 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 904 - -
Cpe13g00659 905 MobiDBLite consensus disorder prediction 1 21 - -
Cpe13g00659 905 Pfam LIM-domain binding protein 334 588 IPR029005 -
Cpe13g00659 905 PANTHER LIM DOMAIN-BINDING PROTEIN 1 904 IPR029005 -
Cpe13g00659 905 MobiDBLite consensus disorder prediction 78 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00870 Cpe-Chr6:5688671 Cpe13g00659 Cpe-Chr13:6223255 1.03E-37 dispersed
Cpe09g00106 Cpe-Chr9:607677 Cpe13g00659 Cpe-Chr13:6223255 4.15E-103 dispersed
Cpe13g00659 Cpe-Chr13:6223255 Cpe14g00123 Cpe-Chr14:660969 1.93E-100 dispersed
Cpe02g00864 Cpe-Chr2:5779985 Cpe13g00659 Cpe-Chr13:6223255 0 transposed
Cpe01g02095 Cpe-Chr1:17732502 Cpe13g00659 Cpe-Chr13:6223255 3.73E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00659 - - csv:101218018 1419.06