Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00676 ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGGTTGGGCTCACCCTTCCTCCATGGAGGTAGCAGAACTCAGACCTTGCTGGCTGGAGCCAGAGGCGGTGTCAATGTCGTTGGCTCTCGCAAGCTTGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGCGGAGGCAACTTAGTCGACCCAGAATGGCTAGATGGCTCACTTCCAGGTGACTTCGGCTTCGACCCATTAGGGTTGGGGAAGGACCCTGCATTTCTGAAATGGTACAGAGAAGCAGAGCTGATCCACGGCCGTTGGGCAATGGCAGCGGTGGTCGGAATCTTCGTAGGCCAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCAGGCGCAATTGCTCCATTCTCCTTTGGATCACTGCTGGGAACCCAGCTTCTACTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGTTATCCCGGCGGAAAATTCTTCGATCCGTTGGGATTTGCCGGAACTATTAAAGATGGGGTTTACATTCCAGACACGGAGAAATTGGAGAGATTGAAGTTGGCTGAGATCAAGCATGCTAGGCTCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGAGTATAA 768 54.56 MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGV 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6360083 6363238 + Cp4.1LG13g03990.1 Cpe13g00676 479874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00676 255 SUPERFAMILY Chlorophyll a-b binding protein 59 254 - -
Cpe13g00676 255 Gene3D Chlorophyll a/b binding protein domain 67 254 - -
Cpe13g00676 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 255 - -
Cpe13g00676 255 Pfam Chlorophyll A-B binding protein 67 243 IPR022796 -
Cpe13g00676 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 255 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00386 Cpe-Chr4:4501464 Cpe13g00676 Cpe-Chr13:6360083 3.38E-179 dispersed
Cpe13g00676 Cpe-Chr13:6360083 Cpe04g01009 Cpe-Chr4:9034391 1.22E-39 dispersed
Cpe13g00676 Cpe-Chr13:6360083 Cpe10g00945 Cpe-Chr10:5300445 8.06E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00676 K08917 - csv:101204705 500.745