Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00716 ATGCTCTTGAAGCCCTTCAACACCGTTGCCGTCGTATTCATGCTCGCTTTCGTGTTCTTCATCCTTTTCTTCACTGGCTTCCTCGAATTTCCGCCGGCATCCACTTCCATCGTACCGGCCGTCGATGATTTGAATCTATCCGTAGCCGAGTTCGCTTTCGATCCTTTCTCCGATTTGATCACCGCCTTTAAGAAATGGGACGCTCAGGTTGGCTGCGATCGATTTCGGGAGAAAATTAGCGGCGGTATGGGAAATGGATCTTCGTCGACTTCGCTACAGCTTGTCGGCGGCGACTCTAATTCGGAATGTGGAGGGCTGAAACTGAATCATGTCTCTGTTTTGGTGAAAGGATGGACATGGATCCCTGATAATTTAGACAATTTGTATTCGTGTTCTTGTGGATTGAGCTGTCTTTGGACTAAATCTTCTGTTCTTGCCGATAAACCTGACGCCTTGTTCTTCGAGACCAGTACGCCTCCGCGTCAGAGGCGCAGGGGTGATCCTCTCCGTATTTATATGGATCTCGAGGCTGGTCGGAAGCGCTCAGGTTTTGAGGATCTATTCGTTAGTTATCATGCGGAAGACGATGTTCAGTCAACCTATGCAGGAGCACTCTTTCACAATGGTCGAAACTATCACGTATCTTCTTCTAAAAACAATGATACGCTCGTTTATTGGTCGTCGTCTCGTTGTCTTCCCCAACGAAACCAGCTTGCTAGGAAGCTTCTAAGCTTGCTGCCTCACCATTCATTTGGCAAGTGCTTGAACAATGTAGGCGGGCTTGACATGGCCCTTGATATGTACCCTGAATGTGCAAACGATGCCAGTGTCACCCCAAAATGGTGGGATCACTTGCATTGTGCAATGTCTCATTACAAATTCGTTCTAGCAATCGAAAACACGATGACCGAGAGTTACGTAACGGAGAAGCTATTTTATGCGCTAGACTCCGGTTCGGTTCCGATCTATTTTGGTGCTCCAAATGTCTGGGACTTTGTCCCTCCACATTCCATAATTGATGGGTCTAAATTCAGCTCGTTGGAAGAGTTAGCTTCTTATGTTAAACGACTTGCTGATGATCCGGTAGCTTATGCTGAATACCATGCTTGGAGACGATGCCGTGCGTTGGGCAACTATAGGAGGACCCGAGCTGCAAGCCTCGACACGCTGCCGTGCCGGGTATGTAATGCCGTGAGCAGAAGGGGTGGTAGAAATGGATGA 1221 48.16 MLLKPFNTVAVVFMLAFVFFILFFTGFLEFPPASTSIVPAVDDLNLSVAEFAFDPFSDLITAFKKWDAQVGCDRFREKISGGMGNGSSSTSLQLVGGDSNSECGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSSVLADKPDALFFETSTPPRQRRRGDPLRIYMDLEAGRKRSGFEDLFVSYHAEDDVQSTYAGALFHNGRNYHVSSSKNNDTLVYWSSSRCLPQRNQLARKLLSLLPHHSFGKCLNNVGGLDMALDMYPECANDASVTPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASYVKRLADDPVAYAEYHAWRRCRALGNYRRTRAASLDTLPCRVCNAVSRRGGRNG 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6625699 6628764 - Cp4.1LG13g10780.1 Cpe13g00716 479914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00716 406 PIRSF FucT_plant 1 406 IPR017177 -
Cpe13g00716 406 Gene3D - 171 379 IPR038577 -
Cpe13g00716 406 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 401 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cpe13g00716 406 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 13 405 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cpe13g00716 406 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 98 400 - -
Cpe13g00716 406 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 13 405 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00910 Cpe13g00716 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00716 Cpe-Chr13:6625699 Cpe14g00293 Cpe-Chr14:1719598 7.46E-15 dispersed
Cpe01g02150 Cpe-Chr1:18090933 Cpe13g00716 Cpe-Chr13:6625699 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00716 K14412 - csv:101216230 762.296