Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00729 ATGGCGACAGAGCGACCGCTATTGATTATATCTCCAAGAACGCCAAACACTATCTCTCACGATTTGCAGAAACCAGAGCCGAACCGACTTGGATTGTTCTTCGCCATGGATACTCCAAATCCTAATGAGAACTCGGCGAGTACCGAACTGGATCATCGCTCATTCTCGCGGCGAAGTCAATCGAAGTCCTCAATTCGTGAAGTCGGTTCCAGTGATTTTGGATCGAGGCCTGTTCGTCATGGGTCTCGAGGTGCCGATTCTGAAGCATTGAGCATATCACAGAAGGAAATCAGTGACGAAGATGCGAGGTTAATATACATCGATGATCCCGAAAAGACGAACCAAACGTTTGAATTCGCTAGAAATTCGATTCGCACCGGCAAGTATTCTATTCTCACTTTTCTGCCCAGGAATCTGTTTGAACAATTTCATAGAATTGCTTATATCTATTTCCTTGTTATTGCTGTTCTTAATCAACTTCCCCAGCTTGCCGTTTTTGGTCGCACTGTCTCCATTTTGCCTTTAGCTTTTGTTCTGCTAGTTACTGCTGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAAATTGAGAACAATAGGTTAGCTTCAGTTTTAGTAGATGGTCAGTTTCAAATGAAGAAATGGAAGCATATAAGAGTTGGTGAGATCATTAAGATTAGTGCAAATGATACCATTCCTTGTGACATGGTGCTTCTTTCTACCAGTGATTCTACAGGGGTTGCATATTTGCAGACACTGAATTTGGATGGGGAATCGAATTTGAAAACGCGGTATGCGAAACAGGAGACGATGTCGAAAATGCCCGACAAGGAGAAGATTATTGGGTTGATTAAATGTGAGAAACCCAATAGGAATATCTATGGATTTCAGGCTAATATGGAGATCGATGGGAAACGTCTTTCTCTTGGACCTCCAAACATAGTTCTTCGTGGCTGTGAGCTCAAGAATACGAGCTGGGCTGTTGGCGTTTCGGTTTATGCTGGCCGTGAGACGAAAGCCATGCTTAACAGTTCTGGAGCTCCATCGAAACGAAGCCGACTCGAGACTCGTATGAATGTAGAGATTGTTATGCTGTCTTTATTTCTCATTGCTTTGTGTACTGTTGTTTGTGTTTTGGCTGCAGTTTGGTTCATCAGAAACAGGGAAGATTTGGACATTTTGCCTTTTTTCAGAGATAAGGACTTCTCAAAGGACCCACCTGAAACTTATAATTACTATGGATGGGGATTGGAGGCGTTTTTTGTATTCCTCATGTCAGTCATTGTGTTTCAGATTATGATCCCCATTTCATTATACATTTCAATGGAGCTTGTTCGTGTCGGTCAGGCTTATTTTATGATTCAAGACACGCAAATGTATGATGAAACATCGAATTCGAGATTTCAATGCCGGGCTTTGAACATAAATGAGGATTTAGGACAAATAAAGTATGTGTTTTCGGACAAAACGGGTACCCTTACTGAGAATAAGATGGAGTTTCGATGTGCAAGCATCTGGGGAGTCGATTATGGAGGTGAAAGTACTGATACGCTCGACGAGCAGATCGGATACTCCGTTCGAGTGAATGGAAAGGTTTTGAGACCAAAATTGATGGTGAAAACTGATCCTGAGCTTCTACAGTTATCGAAAAGTGGAAAGCACACTAAGAATGGAAGATATATTCATGATTTCTTCCTTGCATTAGCTGCTTGCAATACCATTGTTCCTCTCATTACCAAAACTTGTGATCCTTCAGTGCAATTGATTGACTACCAAGGGGAGTCTCCAGATGAACAGGCATTGGTTTATGCTGCAGCAGCATATGGTTTTATGCTAATCGAACGAACTTCTGGCCATATAGTTATTGATATACATGGTGAAAAACAAAGCGACAGGAAGCGGATGTCGGTGATATTGGGGTGTCCAGATATGACCTTTAAAGTATTTGTAAAAGGTGCTGATAATTCCATGTTCAAGGTGGCATGTGAAAACCTGAACATGGATATCATTCAGGTGACTAAAGCTCATCTGTATTCATACTCATCAAAGGGTCTCAGAACACTGGTTATTGGGATGAAAGAACTCAGTTCCTTTGACTTTGATAAATGGCACTCGCTGTTTGAGGAAGCAAGTACCGCTTTGATTGGCAGGGCTGCTAAGCTTCGCAAGGTTGCCAGCAACATAGAAAACAATCTCTTGATATTAGGAGCCTCAGGCATTGAAGATAAGTTACAAAAAGGTGTGCCAGAAGCCATAGAAGCTTTAAGAACTGCAGGAATTAAAGTATGGGTTTTGACTGGAGACAAGCAAGAAACTGCCATATCAATAGGTTACTCCTCAAAGCTCTTGACAAACAAGATGACCCAAGTTATAATTAACGACAACTCGGTAGAATCGTGCAAAAGGAGGTTAGAAGATGCAATAATCATGTCGAAGAAGCTTGCTGCTACCTCAGGCGTTGCACTGGATAATGAAAGAAGTACTGAAGTTGTAAGGACTTCTGTTGCTTTGATCATTGATGGCAGCAGACTCGTTCATATTCTCGACGGCGCAAATGACGTCTCCATGATCCAAAAGGCAGATGTGGGCGTCGGCATCAGTGGTCTAGAGGGTCGACAAGCTGTCATGGCGTACGTGCTCTTTACGGGTTACTCGTTGACGACGGCGATCAACCAATGGAGCAGTGTGCTGTACTCTATAATCTATACTTGTTTGCCCACTATTGTTGTTGGTATTCTTGACAAGGACCTGGGAAGAAGGACTCTTCTTAGGTCCCCTCAACTATATGGGGCTGGCCATAGACAGGAGAGCTACAACTCTGGGTTGTTTTGGTTAACAATGGTTGACACTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCTTTGCATTTTGGGCTACCCCCGTCGACATCTCGGGCCTTGGAGATCTCTGGCTACTCGCCACGGTCATTGTCGTCAACTTGCACTTGGCAATGGACGTGGTTCGATGGTATACTCTCACCCATGCTGTGATCTGGGGATCCACACTCGCAACTGTCATTTGTGTCATTGTTCTTGATTCGATATTGTCACTTCCCGGTTTCTGGGCGATATATCACGTGGCGGGCACGGCCTCGTTTTGGCTATGTTTGTTATCTATCGTCGTAGTAGCACTACTTCCCCGTCTTGTCGTAAAATACCTTTATCAATGTTACTGGCCATGTGACATCCAGATAGCAAGAGAGGAGGATAAATTTGGAAGGACAAGCGAGGTGGGAGCTGTACAAACAGAGATGGTGCCAGTTCTCAGCAATCCTTCACAACTTTGA 3321 43.36 MATERPLLIISPRTPNTISHDLQKPEPNRLGLFFAMDTPNPNENSASTELDHRSFSRRSQSKSSIREVGSSDFGSRPVRHGSRGADSEALSISQKEISDEDARLIYIDDPEKTNQTFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRTVSILPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVDGQFQMKKWKHIRVGEIIKISANDTIPCDMVLLSTSDSTGVAYLQTLNLDGESNLKTRYAKQETMSKMPDKEKIIGLIKCEKPNRNIYGFQANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVSVYAGRETKAMLNSSGAPSKRSRLETRMNVEIVMLSLFLIALCTVVCVLAAVWFIRNREDLDILPFFRDKDFSKDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIQDTQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESTDTLDEQIGYSVRVNGKVLRPKLMVKTDPELLQLSKSGKHTKNGRYIHDFFLALAACNTIVPLITKTCDPSVQLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGEKQSDRKRMSVILGCPDMTFKVFVKGADNSMFKVACENLNMDIIQVTKAHLYSYSSKGLRTLVIGMKELSSFDFDKWHSLFEEASTALIGRAAKLRKVASNIENNLLILGASGIEDKLQKGVPEAIEALRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQVIINDNSVESCKRRLEDAIIMSKKLAATSGVALDNERSTEVVRTSVALIIDGSRLVHILDGANDVSMIQKADVGVGISGLEGRQAVMAYVLFTGYSLTTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLRSPQLYGAGHRQESYNSGLFWLTMVDTVWQSIAIFFIPLFAFWATPVDISGLGDLWLLATVIVVNLHLAMDVVRWYTLTHAVIWGSTLATVICVIVLDSILSLPGFWAIYHVAGTASFWLCLLSIVVVALLPRLVVKYLYQCYWPCDIQIAREEDKFGRTSEVGAVQTEMVPVLSNPSQL 1106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6703696 6709261 + Cp4.1LG13g10860.1 Cpe13g00729 479927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00729 1106 CDD P-type_ATPase_APLT_Dnf-like 121 964 - -
Cpe13g00729 1106 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Cpe13g00729 1106 Pfam Phospholipid-translocating P-type ATPase C-terminal 879 1071 IPR032630 -
Cpe13g00729 1106 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 751 IPR023299 GO:0000166
Cpe13g00729 1106 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 850 880 - -
Cpe13g00729 1106 Gene3D - 495 741 IPR023299 GO:0000166
Cpe13g00729 1106 MobiDBLite consensus disorder prediction 1 92 - -
Cpe13g00729 1106 Gene3D - 742 888 IPR023214 -
Cpe13g00729 1106 SUPERFAMILY HAD-like 476 884 IPR036412 -
Cpe13g00729 1106 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 119 852 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe13g00729 1106 PRINTS P-type cation-transporting ATPase superfamily signature 850 869 - -
Cpe13g00729 1106 PRINTS P-type cation-transporting ATPase superfamily signature 761 771 - -
Cpe13g00729 1106 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Cpe13g00729 1106 Gene3D - 180 346 - -
Cpe13g00729 1106 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 44 852 - -
Cpe13g00729 1106 SUPERFAMILY Calcium ATPase, transduction domain A 202 343 IPR008250 -
Cpe13g00729 1106 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 44 852 - -
Cpe13g00729 1106 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1071 IPR023298 -
Cpe13g00729 1106 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 850 880 - -
Cpe13g00729 1106 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 881 1104 - -
Cpe13g00729 1106 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 881 1104 - -
Cpe13g00729 1106 Pfam Phospholipid-translocating ATPase N-terminal 105 171 IPR032631 -
Cpe13g00729 1106 Pfam E1-E2 ATPase 204 447 - -
Cpe13g00729 1106 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 421 510 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01002 Cpe-Chr10:5751796 Cpe13g00729 Cpe-Chr13:6703696 0 dispersed
Cpe13g00729 Cpe-Chr13:6703696 Cpe19g00155 Cpe-Chr19:1247702 0 dispersed
Cpe01g02161 Cpe-Chr1:18463254 Cpe13g00729 Cpe-Chr13:6703696 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00729 K14802 - csv:101212953 1925.98