Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00780 ATGTCCCTAATGCTCTTCTTTGAGAGGCTTTATATGGGTGTTGTCATTCTCTTTCTTAAGCTCTTTGCAACAAACCCTCACAACACTTATAAGTGGGAGCCCATTCGAGATGATCTTGAGCTTGCCCATTTTGTTTATCCCATGGTTTTGGTCCAAATTCCAATGTACAATGAAAGCGAGGTTTATCGATTATCTATTGGAGCAGCATGTGGACTTTCATGGCCATCTGATAGGATCATCATTCAAGTTCTTGATGATTCTACTGATCCTTCTATCAAGGATCTGGTGGAATTAGAGTGCAAAAGATGGGCAAGCAAAGGGATAAACATAAAGTACGAGATCCGAGACAGCAGAAATGGGTACAAAGCAGGGGCTCTAAAAGAGGGAATGAAGCATAATTACGTTAAGCTCTGTGATTACGTCGCTATTTTCGACGCCGATTTCCAACCAGAGCCTGATTTCCTTTGGCGTACCATTCCATTTCTTACGAACAATCCTGAGATTGCTCTTGTTCAAGCTCGCTGGAAATCATTCCACCTGATCATTTTCTGGATCCTTTTCGAGAATGTCATGTCGCTGCACCGAACAAAGGCAACATTCATCGGTCTGTTGGAAGCAGGGAGAGTAAATGAATGGGTCGTCACCGAGAAATTGGGAGATGCACTAAAGACTAAACTAGGTTCCAAAACTCCCTGGAAACCTCAGTTTAGATTCGGAGAAAGACTCCATCTGCTTGAGCTTTGTGTTGGAGCCTATCTCTTCTTCTGCGGCTGCTATGATCTCAACTTCGGGAAGAACCGATACTTCATCTACCTCTTCCTTCAGTCATTTGCTTTCTTCATCGCCGGGGTCGGTTACATCGGAACTCTGGTTCCCAACTCTTAG 885 43.84 MSLMLFFERLYMGVVILFLKLFATNPHNTYKWEPIRDDLELAHFVYPMVLVQIPMYNESEVYRLSIGAACGLSWPSDRIIIQVLDDSTDPSIKDLVELECKRWASKGINIKYEIRDSRNGYKAGALKEGMKHNYVKLCDYVAIFDADFQPEPDFLWRTIPFLTNNPEIALVQARWKSFHLIIFWILFENVMSLHRTKATFIGLLEAGRVNEWVVTEKLGDALKTKLGSKTPWKPQFRFGERLHLLELCVGAYLFFCGCYDLNFGKNRYFIYLFLQSFAFFIAGVGYIGTLVPNS 294
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 7081766 7086074 + Cp4.1LG13g10210.1 Cpe13g00780 479978
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00780 294 SUPERFAMILY Nucleotide-diphospho-sugar transferases 46 180 IPR029044 -
Cpe13g00780 294 Pfam Glycosyl transferase family 2 52 174 IPR001173 -
Cpe13g00780 294 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 176 - -
Cpe13g00780 294 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 176 293 - -
Cpe13g00780 294 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 39 215 IPR029044 -
Cpe13g00780 294 PANTHER - 176 293 - -
Cpe13g00780 294 PANTHER - 1 176 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01050 Cpe-Chr8:8031988 Cpe13g00780 Cpe-Chr13:7081766 1.09E-151 dispersed
Cpe13g00780 Cpe-Chr13:7081766 Cpe19g00450 Cpe-Chr19:3992568 1.24E-149 dispersed
Cpe16g00485 Cpe-Chr16:5928488 Cpe13g00780 Cpe-Chr13:7081766 9.07E-16 dispersed
Cpe01g02198 Cpe-Chr1:18694227 Cpe13g00780 Cpe-Chr13:7081766 6.43E-153 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00780 K13680 - oeu:111383842 478.789