Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00808 ATGGCTTCCAACACCTTGATGAGCTGCGGCATCGCCACCACCGCTTTCCCTTCAGTTCTTTCCTCCTCTAAGTCTAAATTCGCCACCGGTGTCCCGATTTCTGGCGTCGCCGTCAATGCGTCATCCCGGTTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCCCCGTACCTTGACGGCTCAGCCCCCGGTGATTTTGGCTTCGATCCTCTTCGCCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACCTACTTGGGGCAACCAGTTCCATGGGGAACTTTGCCCACCATTCTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACACCGAGAAGAAGAAGTACCCTGGAGGTGCTTTCGACCCATTGGGCTACTCAAAAGACCCTGTAAAGCTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTGTTAGCTTTCGTTGGAATCTGTGTGCAACAAACGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGATCAATTTCGTCTTGA 741 53.58 MASNTLMSCGIATTAFPSVLSSSKSKFATGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDIIIPRSISS 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7233422 7236034 - Cp4.1LG13g09890.1 Cpe13g00808 480006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00808 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Cpe13g00808 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 26 237 - -
Cpe13g00808 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 237 IPR001344 GO:0009765|GO:0016020
Cpe13g00808 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Cpe13g00808 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02245 Cpe13g00808 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00945 Cpe-Chr10:5300445 Cpe13g00808 Cpe-Chr13:7233422 1.87E-45 dispersed
Cpe13g00808 Cpe-Chr13:7233422 Cpe18g00788 Cpe-Chr18:7444269 3.60E-49 dispersed
Cpe01g02245 Cpe-Chr1:19081239 Cpe13g00808 Cpe-Chr13:7233422 4.16E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00808 K08907 - csv:101211428 490.345