Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe13g00816 | GTTTTTGGATCATCCGAGCCATCTATTCAGATTATGGGTAAGGAGAAGGTTCACATCAACATTGTGGTCATTGGCCACGTCGATTCTGGCAAGTCGACCACCACTGGTCATTTGATCTACAAGCTTGGAGGCATTGACAAGCGTGTTATTGAGAGAAACACTGGTGTCGATATGTCTTTGAAATCTCTTTTTGATGTTAACGTTTTTGGATCATCCGAGCCATCTATTCAGATTATGGGTAAGGAGAAGGTTCACATCAACATTGTGGTCATTGGCCACGTCGATTCTGGCAAGTCGACCACCACTGGTCATTTGATCTACAAGCTTGGAGGCATTGACAAGCGTGCCGACTGTGCTGTTCTTATCATCGACTCTACTACCGGAGGTTTTGAAGCTGGTATTTCGAAGGATGGGCAGACCCGTGAACACGCCCTTCTTGCCTTCACTCTTGGTGTAAGACAAATGATTTGCTGCTGCAACAAGATGGATGCCACCACTCCCAAGTACTCCAAATCTAGATACGACGAAATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAGGTTGGCTACAACCCAGACAAAATTCCCTTCGTCCCAATCTCTGGATTTGAGGGTGACAACATGATTGAAAGATCCACCAACCTCGACTGGTACAAGGGCCCAACCCTTCTTGAGGCCCTCGACTTGATCCAAGAGCCCAAGAGACCATCTGACAAGCCCCTTCGCCTTCCACTTCAGGATGTCTACAAGATCGGAGGTATTGGCACTGTGCCAGTGGGTCGTGTTGAGACAGGTATTCTGAAACCTGGTATGGTCGTGACCTTCGCCCCCTCTGGACTGACTACCGAGGTAAAGTCTGTTGAGATGCACCATGAAGCTCTCCAAGAAGCCCTCCCTGGTGACAACGTGGGGTTCAACGTGAAGAACGTTGCCGTGAAGGATCTCAAGCGTGGATTCGTTGCCTCAAATTCCAAGGATGATCCCGCCAAGGAAGCTGCCAATTTCACTGCCCAAGTTATCATCATGAACCATCCAGGGCAGATTGGAAATGGTTATGCCCCAGTTCTTGATTGCCATACCTCTCATATTGCCGTTAAATTCTCTGAGATTTTGACCAAGATTGACAGGCGATCCGGTAAAGAACTCGAGAAAGAACCCAAGTTCTTGAAAAACGGCGATGCTGGATTTGTTAAGATGATCCCCACCAAGCCCATGGTGGTGGAAACATTCGCCACATATCCACCACTTGGACGATTTGCCGTGAGGGACATGCGTCAAACAGTGGCCGTCGGTGTTATCAAGAGCGTGGAAAAGAAGGATCCAAGCGGTGCCAAGGTCACCAAGTCAGCTGTTAAGAAATCTGTTCTTTTTCCTGAGATTCAGCCATGGACCACCAAATACTACTGCACTGTTATTGATGCTCCAGGCCATCGTGACTTCATCAAGAACATGATTACTGGTACTTCCCAAGCCGACTGTGCTGTTCTTATCATTGACTCTACTACCGGAGGCTTTGAAGCTGGTATTTCAAAGGATGGGCAGACCCGTGAACACGCCCTTCTTGCCTTTACCCTTGGTATGGATTCCACCACCCCCAAGTACTCTAAAGCTAGATACGACGAAATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAGGTTGGCTACAACCCAGACAAAATCCCCTTCGTCCCAATCTCTGGATTTGAAGGCGACAACATGATTGAAAGATCCACCAACCTTGACTGGTACAAGGGCCCAACCCTTCTCGAGGCCCTCGACTTGATCCAAGAGCCTAAGAGACCATCTGACAAGCCCCTTCGCCTTCCACTTCAGGATGTTTACAAGATCGGAGGTATTGGAACTGTGCCAGTGGGTCGTGTTGAGACGGGTGTTCTTAAACCTGGTATGGTCGTGACCTTCGCCCCCTCTGGACTGACAACTGAAGTAAAGTCTGTTGAGATGCACCATGAAGTTCTCCAAGAAGCTCTCCCTGGTGACAATGTGGGGTTCAATGTTAAGAACGTTGCTGTGAAGGATCTCAAGCGTGGCTACGTTGCTTCAAATTCCAAGGATGATCCTGCTAAGGAAGCTGCCAATTTCACCTCTCAAGTTATCATCATGAACCACCCAGGTCAAATTGGAAATGGTTATGCCCCAGTTCTTGATTGCCATACCTCTCATATTGCCGTTAAGTTCTCTGAGATTTTGACCAAGATTGACAGGCGGTCTGGTAAAGAGCTTGAGAAAGAGCCCAAGTTCTTGAAGAACGGCGATGCTGGATTTGTTAAGATGATACCCACCAAGCCCATGGTGGTGGAAACATTCGCCACATATCCACCACTTGGACGGTTTGCGGTGAGGGACATGCGGCAGACTGTGGCTGTTGGTGTCATCAAGGCCGTTGAGAAGAAGGATCCAAGCGGGGCCAAGGTGACCAAGTCTGCGGCCAAGAAATCAGGGAAGTGA | 2466 | 48.42 | VFGSSEPSIQIMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERNTGVDMSLKSLFDVNVFGSSEPSIQIMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFATYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAVKKSVLFPEIQPWTTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGMDSTTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPSGLTTEVKSVEMHHEVLQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFATYPPLGRFAVRDMRQTVAVGVIKAVEKKDPSGAKVTKSAAKKSGK | 821 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 7275231 | 7284107 | - | Cp4.1LG13g09780.1 | Cpe13g00816 | 480014 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe13g00816 | 821 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 14 | 52 | IPR027417 | - | |
Cpe13g00816 | 821 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 698 | 801 | IPR009001 | - | |
Cpe13g00816 | 821 | CDD | EF1_alpha_III | 695 | 798 | - | - | |
Cpe13g00816 | 821 | SUPERFAMILY | Translation proteins | 598 | 693 | IPR009000 | - | |
Cpe13g00816 | 821 | Gene3D | - | 116 | 233 | IPR027417 | - | |
Cpe13g00816 | 821 | Pfam | Elongation factor Tu GTP binding domain | 84 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Cpe13g00816 | 821 | Pfam | Elongation factor Tu GTP binding domain | 463 | 593 | IPR000795 | GO:0003924|GO:0005525 | |
Cpe13g00816 | 821 | Pfam | Elongation factor Tu GTP binding domain | 17 | 52 | IPR000795 | GO:0003924|GO:0005525 | |
Cpe13g00816 | 821 | Pfam | Elongation factor Tu GTP binding domain | 116 | 228 | IPR000795 | GO:0003924|GO:0005525 | |
Cpe13g00816 | 821 | PANTHER | TRANSLATION FACTOR | 117 | 454 | - | - | |
Cpe13g00816 | 821 | PANTHER | TRANSLATION FACTOR | 464 | 819 | - | - | |
Cpe13g00816 | 821 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 463 | 621 | IPR027417 | - | |
Cpe13g00816 | 821 | SUPERFAMILY | Translation proteins | 233 | 328 | IPR009000 | - | |
Cpe13g00816 | 821 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 16 | 237 | IPR000795 | GO:0003924|GO:0005525 | |
Cpe13g00816 | 821 | PANTHER | TRANSLATION FACTOR | 79 | 115 | - | - | |
Cpe13g00816 | 821 | CDD | EF1_alpha_II | 602 | 692 | - | - | |
Cpe13g00816 | 821 | PANTHER | TRANSLATION FACTOR | 12 | 54 | - | - | |
Cpe13g00816 | 821 | CDD | EF1_alpha_II | 237 | 327 | - | - | |
Cpe13g00816 | 821 | PANTHER | ELONGATION FACTOR 1-ALPHA | 79 | 115 | - | - | |
Cpe13g00816 | 821 | PANTHER | ELONGATION FACTOR 1-ALPHA | 464 | 819 | - | - | |
Cpe13g00816 | 821 | Gene3D | - | 72 | 115 | IPR027417 | - | |
Cpe13g00816 | 821 | Gene3D | - | 438 | 600 | IPR027417 | - | |
Cpe13g00816 | 821 | Gene3D | - | 6 | 68 | IPR027417 | - | |
Cpe13g00816 | 821 | Gene3D | Translation factors | 330 | 437 | - | - | |
Cpe13g00816 | 821 | Gene3D | Translation factors | 695 | 802 | - | - | |
Cpe13g00816 | 821 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 81 | 256 | IPR027417 | - | |
Cpe13g00816 | 821 | Pfam | Elongation factor Tu domain 2 | 255 | 320 | IPR004161 | GO:0005525 | |
Cpe13g00816 | 821 | Pfam | Elongation factor Tu domain 2 | 620 | 685 | IPR004161 | GO:0005525 | |
Cpe13g00816 | 821 | Gene3D | Translation factors | 236 | 323 | - | - | |
Cpe13g00816 | 821 | Gene3D | Translation factors | 601 | 688 | - | - | |
Cpe13g00816 | 821 | PANTHER | ELONGATION FACTOR 1-ALPHA | 12 | 54 | - | - | |
Cpe13g00816 | 821 | PANTHER | ELONGATION FACTOR 1-ALPHA | 117 | 454 | - | - | |
Cpe13g00816 | 821 | Pfam | Elongation factor Tu C-terminal domain | 329 | 436 | IPR004160 | - | |
Cpe13g00816 | 821 | Pfam | Elongation factor Tu C-terminal domain | 694 | 801 | IPR004160 | - | |
Cpe13g00816 | 821 | PRINTS | GTP-binding elongation factor signature | 111 | 122 | IPR000795 | GO:0003924|GO:0005525 | |
Cpe13g00816 | 821 | PRINTS | GTP-binding elongation factor signature | 20 | 33 | IPR000795 | GO:0003924|GO:0005525 | |
Cpe13g00816 | 821 | PRINTS | GTP-binding elongation factor signature | 155 | 164 | IPR000795 | GO:0003924|GO:0005525 | |
Cpe13g00816 | 821 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 333 | 436 | IPR009001 | - | |
Cpe13g00816 | 821 | CDD | EF1_alpha_III | 330 | 433 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe13g00816 | Cpe-Chr13:7275231 | Cpe17g00257 | Cpe-Chr17:1686638 | 0 | dispersed | |
Cpe13g00816 | Cpe-Chr13:7275231 | Cpe16g00549 | Cpe-Chr16:6326649 | 0 | wgd | |
Cpe13g00816 | Cpe-Chr13:7275231 | Cpe05g00861 | Cpe-Chr5:5660508 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe13g00816 | K03231 | - | csv:101220517 | 724.931 |