Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00840 ATGAAGCAGGCAGGTCAAATGTTTGAGAAGGCAAAGCCATACTTGGGAGCAATAGCATTAAGATTTGGTTCTGCAGGAATGTCAATTATTTCTAAGGCTGCTCTAAACCAAGGAATGAACCAACTTGTTACCATTGTTTATCGTTACTCTGTCGGTGCCATTGTTGTTGCTCCTTTTGCTTTCGTCTTGGATAGGAAAGTGAGACCAAAGATGACTCTCCCCATCTTCGCCAAGATTCTTCTACTCGGCTTACTCGAGCCTGTAATAGCCCAGAGCTTGATTTACTCTGGTACTAAATACACAACTGCAACGTTTGCAACAGCCATGTGCAATATTCTTCCGGCCTTTGCATTTATAATGGCTTGGATTTGCAAAATGGAGAAGGTGAATATTAGAAGATTAAGAAGCCAGGCAAAGATTTTAGGGACTTTAGTTACAGTAGGAGGAGCAATGATGATGACTCTTATAAAAGGACCCTTATTGAATTTACCTTGGACCAAAGAGAACTCCAACCCTCACTCTTATTCAAGCCTTGGAAACAAGCAAGAACCTGTTAAGGCTGCCATTGTTATCTCCATCTCAAGTATCTGCTCCTCAGCCTTCACCATCCTTCTGGCACATACAATAAGGTCATACCCAGCTGAGTTCACACTAACAACTTTCATATGCTTGGCTGGAGCAGTGGAAAGTACTATTTTAGCGTTAGCATTTGAATGGAACAATCCAGCTGCATGGGCTTTACATGCAGACTCCATACTCTTAGCTGCCCTCTATGGTGGAATAATATCTTCTGGAATTGCGTATTATATCCAAGGAGTGGTGGTGAAATTAAAAGGGCCTGTATTTGTTACTGCATTCAATCCTCTCAGCATGGTCGTAGTTGCTGTGATTAGTTCTTTCATATTCGCCGAGAGACTGCGCTTAGGAAGGGTTATTGGAGCCGTTGTTATAATTATGGGCCTATACTTGGTTTTGTGGGGCAAGAGCAAAGATAAAGTTCCATTCAAAGTGGCGAATAACAATACTGATGAATTGCCAACTTCACTCCAAGACTCAACTACCACAAACCAGCAGCAGCCGAAGCCCTTAGATCAACATCTCAAAGCTTCTGCCCCAACATCAGTAAGCAACTGA 1134 42.42 MKQAGQMFEKAKPYLGAIALRFGSAGMSIISKAALNQGMNQLVTIVYRYSVGAIVVAPFAFVLDRKVRPKMTLPIFAKILLLGLLEPVIAQSLIYSGTKYTTATFATAMCNILPAFAFIMAWICKMEKVNIRRLRSQAKILGTLVTVGGAMMMTLIKGPLLNLPWTKENSNPHSYSSLGNKQEPVKAAIVISISSICSSAFTILLAHTIRSYPAEFTLTTFICLAGAVESTILALAFEWNNPAAWALHADSILLAALYGGIISSGIAYYIQGVVVKLKGPVFVTAFNPLSMVVVAVISSFIFAERLRLGRVIGAVVIIMGLYLVLWGKSKDKVPFKVANNNTDELPTSLQDSTTTNQQQPKPLDQHLKASAPTSVSN 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7414496 7425844 - Cp4.1LG13g09630.1 Cpe13g00840 480038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00840 377 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020|GO:0016021
Cpe13g00840 377 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Cpe13g00840 377 PANTHER WAT1-RELATED PROTEIN 9 338 IPR030184 GO:0016021|GO:0022857
Cpe13g00840 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cpe13g00840 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 330 - -
Cpe13g00840 377 PANTHER WAT1-RELATED PROTEIN 9 338 - -
Cpe13g00840 377 MobiDBLite consensus disorder prediction 343 377 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01103 Cpe13g00840 CCT
Cpe01g01103 Cpe13g00840 ECH
Cpe01g00192 Cpe13g00840 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02280 Cpe-Chr1:19291497 Cpe13g00840 Cpe-Chr13:7414496 8.87E-78 wgd
Cpe01g00192 Cpe-Chr1:1083179 Cpe13g00840 Cpe-Chr13:7414496 2.19E-75 wgd
Cpe01g01103 Cpe-Chr1:6513013 Cpe13g00840 Cpe-Chr13:7414496 1.22E-112 wgd
Cpe10g00870 Cpe-Chr10:4902433 Cpe13g00840 Cpe-Chr13:7414496 4.63E-135 wgd
Cpe13g00840 Cpe-Chr13:7414496 Cpe19g00374 Cpe-Chr19:3365005 1.26E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00840 - - csv:101208640 597.045