Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00849 ATGCGGATCATCAACGAGCCTACTGCAGCAGCTATTGCTTATGGACTCGACAAAAAGGCGACCAGTGTCGGCGAGAAGAATGTACTGATATTTGATCTGGGTGGAGGAACATTTGATGTCTCTCTCCTCACAATTGAGGAAGGGATTTTTGAGGTGAAGGCGACTGCTGGTGACACCCATCTCGGAGGTGAAGACTTCGACAACAGATTGGTTAACCATTTCGTACAGGAATTCAAGAGGAAGCATAAGAAGGACATCAGTGGAAATCCAAGGGCTCTAAGAAGATTGAGGACTGCTTGTGAGAGGGCCAAGAGAACCCTATCATCGACTGCCCAAACGACAATCGAGATTGATTCTTTGTATGAGGGAATTGATTTCTATACATCCATCACTCGTGCTAGATTCGAAGAGCTCAACATGGACCTGTTCCGGAAGTGTATGGAGCCGGTTGAGAAGTGTCTGAGAGATGCAAAGATGGACAAAAGCAGCGTCCATGATGTTGTCCTTGTTGGTGGCTCTACGAGGATTCCTAAGGTGCAGCAGCTGTTGCAGGATTTCTTCAATGGCAAGGAACTCTGCAAGAGTATCAACCCTGACGAGGCAGTTGCTTATGGAGCTGCTGTTCAAGCTGCTATCTTGAGTGGCGAAGGAAACGAAAAAGTCCAGGATCTTCTTCTTTTGGATGTCACTCCTCTGTCCCTAGGCTTGGAGACTGCAGGAGGTGTCATGACAGTTCTAATCCCAAGGAACACCACTATACCTGCCAAGAAGGAGCAAGTGTTCTCTACTTACTCAGACAACCAGCCCGGTGTTCTTATTCAGGTCTACGAGGGCGAGAGGACAAGAACCAAAGACAACAACTTGTTGGGCAAGTTTGAACTCTCTGGCATCCCTCCTACTCCAAGAGGTGTTCCTCAGATCACCGTTTGCTTCGACATCGACGCCAATGGCATCCTAAATGTTTCTGCGGAGGACAAAACCACCGGACAGAAGAACAAGATCACTATTACCAACGACAAAGGAAGGTTGTCCAAAGAAGAGATTGAGAAACTGGTTCAGGAAGCAGAGAAATTCAAGGCCGAGGATGAGGATCACAAGAAGAAAGTGGAATCGAAGAACGCATTGGAAAACTATGCATACAACATGAGGAACACAATCAGAGATGAAAAGATCGGTGGTAAACTTGCACCAGAAGATAAGAAGAAGATCGAGGATGCAGTTCAAGAGGCCATTCAGTGGCTAGACAGCAACCAGCTGGCTGAGTCGGATGAATTTGATGACAAGATGAAGGAACTTGAGTCCATTTGCAACCCCATTATAGCCAAGATGTATCAAGGTGGTGCTGACATGGGCGGCGCCGGCGCCGCCATGGATGACGATGCCCCTTCTGGCGGAAGCGGCGCTGGTCCTAAGATTGAAGAAGTTGATTAG 1431 47.73 MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTSITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPAKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPTPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEDHKKKVESKNALENYAYNMRNTIRDEKIGGKLAPEDKKKIEDAVQEAIQWLDSNQLAESDEFDDKMKELESICNPIIAKMYQGGADMGGAGAAMDDDAPSGGSGAGPKIEEVD 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7464166 7465596 - Cp4.1LG13g09340.1 Cpe13g00849 480047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00849 476 MobiDBLite consensus disorder prediction 447 476 - -
Cpe13g00849 476 Gene3D - 19 193 - -
Cpe13g00849 476 Pfam Hsp70 protein 1 445 IPR013126 GO:0005524|GO:0140662
Cpe13g00849 476 ProSitePatterns Heat shock hsp70 proteins family signature 3. 167 181 IPR018181 -
Cpe13g00849 476 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 370 450 IPR029048 -
Cpe13g00849 476 Coils Coil 341 368 - -
Cpe13g00849 476 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 218 372 IPR029047 -
Cpe13g00849 476 Gene3D - 373 446 IPR029048 -
Cpe13g00849 476 Gene3D - 1 210 - -
Cpe13g00849 476 PRINTS 70kDa heat shock protein signature 36 46 - -
Cpe13g00849 476 PRINTS 70kDa heat shock protein signature 196 216 - -
Cpe13g00849 476 PRINTS 70kDa heat shock protein signature 223 242 - -
Cpe13g00849 476 PRINTS 70kDa heat shock protein signature 304 320 - -
Cpe13g00849 476 PRINTS 70kDa heat shock protein signature 164 180 - -
Cpe13g00849 476 Gene3D Actin; Chain A, domain 4 62 145 - -
Cpe13g00849 476 PANTHER HEAT SHOCK PROTEIN 70KDA 1 455 IPR013126 GO:0005524|GO:0140662
Cpe13g00849 476 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 219 376 IPR029047 -
Cpe13g00849 476 SUPERFAMILY Actin-like ATPase domain 25 215 IPR043129 -
Cpe13g00849 476 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 455 - -
Cpe13g00849 476 ProSitePatterns Heat shock hsp70 proteins family signature 2. 30 43 IPR018181 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02287 Cpe-Chr1:19349625 Cpe13g00849 Cpe-Chr13:7464166 0 dispersed
Cpe01g02292 Cpe-Chr1:19373503 Cpe13g00849 Cpe-Chr13:7464166 0 dispersed
Cpe10g00880 Cpe-Chr10:4955234 Cpe13g00849 Cpe-Chr13:7464166 0 dispersed
Cpe13g00849 Cpe-Chr13:7464166 Cpe19g00364 Cpe-Chr19:3302661 0 dispersed
Cpe13g00846 Cpe-Chr13:7456870 Cpe13g00849 Cpe-Chr13:7464166 9.87E-67 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00849 K03283 - csv:101211905 874.774