Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00906 ATGAAAGGGCTTCTTGCTCGTTTGGCCAGCTTGGGAATTCGCGATGGTTCAACCGCCATCGACGGTGGAAGAACTCGAGGCTCCGGTCCCGTGGCGTTAGCTTGCAAATATGTAGGTGGCGGCGATGGGTCGCTGGATGTCTGCGCCAAGGTCTGCCTTATTGATGAGAGTGAAAATATCGTCTTCTATAGCTATGTCAAGCCCATAATTCCCGTTACAAATTATAGGTATGAAACGACGGGCATTCGTCCCGAACACCTTCGAGATGCAATGCCACTAAAGCAAGTTCAAAAGAAAATTCAAGACATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCACTGTGTGGAAGACGATCTCAAACGTCTACAAATCGGATATCCATCCATCATGATAAGATTTGAGATTCAAAATGGAGTACAAGATCTTTATGATTGTGTTGGTGGCATGAGATTGTACAAGAGAATGAGATCACAAGTTCATAGGATAGAGCATCATCCAATGGCTTCTGACCCACAAAACAAAAACAACTTTGCAGCTTGGAGGGAGAATGAGCTTGAGAGGATGAGCCCAGAACAGATGTTGGAGATTTCT 603 45.44 MKGLLARLASLGIRDGSTAIDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENIVFYSYVKPIIPVTNYRYETTGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRFEIQNGVQDLYDCVGGMRLYKRMRSQVHRIEHHPMASDPQNKNNFAAWRENELERMSPEQMLEIS 201
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 7736009 7737153 + Cp4.1LG13g09020.1 Cpe13g00906 480104
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00906 201 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 2 136 - -
Cpe13g00906 201 SMART exoiiiendus 29 165 IPR013520 -
Cpe13g00906 201 Pfam Exonuclease 54 131 IPR013520 -
Cpe13g00906 201 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 137 201 - -
Cpe13g00906 201 PANTHER OS02G0709000 PROTEIN 137 201 - -
Cpe13g00906 201 SUPERFAMILY Ribonuclease H-like 43 151 IPR012337 -
Cpe13g00906 201 PANTHER OS02G0709000 PROTEIN 2 136 - -
Cpe13g00906 201 Gene3D - 28 162 IPR036397 GO:0003676
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe01g02353 Cpe13g00906 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00008 Cpe-Chr5:36020 Cpe13g00906 Cpe-Chr13:7736009 6.20E-45 dispersed
Cpe13g00906 Cpe-Chr13:7736009 Cpe19g00641 Cpe-Chr19:5174733 1.95E-09 dispersed
Cpe13g00906 Cpe-Chr13:7736009 Cpe01g02353 Cpe-Chr1:19714336 8.17E-48 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00906 - - csv:101218614 332.413