Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00914 ATGTTGCAGATGATGGAGGCTGCCATGCCCTTCACTGCCATGATAATGGTGGAGAGCACAGATGTGATCATATCAACACTAATCAAAGCAGCCATGGCCAAAGGGATGAACAACTTGGTCTTCCTTGTCTATTCCAACGCTCTCGCCACCTTCCTTCTCCTTCCCTTTCTCCTCTTTTCTTCCAGAAACAATCTGGGTGCACCTCTATCTTTCTCTATGATCCTTGCCTTCTTTCTCCTTGGGCTTAATGGGAGTGTGGGTGAGTTATTGGCAAACACAGGGATAAACTACAGCTCCCCTGTTCTTTTATCAGCAATGGCAAATCTCATCCCCATTTTCACCTTTCTTCTTGCTGTTATTTTCAGAATGGAGAGGCTTGATTTGAAGAGAAGCAGTGGGAAAACCAAGTGTTTGGGTACCATTATAGCTGTGTCAGGAGCTTTCTTAATAACTCTGTATAAAGGGCCTGTGTTGATCATGTCCTCCTCCTCTCAGTCGGTGGGACAAGAAGCTGTAGCACTGTCACAGAAGCCAAACTGGGTGTTTGGTGGCTTTCTCTTTTTAATGGCCATATTTGGGGGTATGGTTCGTACTGGCGTCCACACATGGTGCTTGCAAAGGAAGGGCCCAGTCTTTGTTGCAATGTTCAAGCCCCTAGGCATGGTCATCGCCGTCGCCTTGGCCGTCAGCTTTCTTCGTGAGTCGCTTTGTCTTGGCAGAACAGAGGAACCGAGTTTGAGGTCTGAACGCAAAGAGATGGCGGGAAGTGGAACATACCTGATGGAAGCGGCTCTACCGTTTCCGGCGATGATCTCCATGGAGTGTATCAACGTCGGACTCAACACTCTTTTCAAAGCCGCCACCGCCTCCGGCATGAGCCACCACGTGTTCGTCGTCTATTCTTACTCCCTCGCCGCGCTTCTCCTCCTCCCTTCTCCCTTCATCTCTCGCAGATCCAGGCGTCTACCACCCCTGAGTTTCTCTGTACTTTCCAAGATCGCGCTTCTCGGACTCATCGGTTCTTCTTCGCAGATTATGGGATACACGGGAATCAATTACAGTTCTCCGACGCTTGCTTCCGCTATCAGCAACCTTGTTCCTGCTTTCACTTTCATCCTCGCCGTCATTTTCAGGATGGAGAAGGTGGTATTGAAAAGACATAGCAGTCAAGCCAAAGTGATGGGCACCATAATATCCATAGCAGGTGCCTTTGTGGTCACTCTTTACAAGGGTCCAAGGATTATACTCTCTTCAGCGCCCACGGCTCTTTCACTTCACCATCCATTACCCTCTTCGCATTCTAATTGGACGAGAATTATGAAGGAATACCCAGACGAGGCAACAGTGATCTTCTTCTACAACTTAACAGTGGCCTTCATAGCTGCAATTGTTGGGGTGGTTTTAGAGACAGATCCAAGCGCTTGGATTTTGAAGCAGCATACAGCATTGGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGCTTGAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCAGTGTTCGTAGCGATGTTTAAGCCGTTGTCGATCGTCGTCGCCATCGTAATGGGTGTTCTATTTCTCGGCGATTCACTATATCTTGGAAGTGTTGTTGGAGCATCCATAATATCCATAGGGTTTTATACTGTGATGTGGGGAAAAGCAAAGGAAGAAAGGGGTGCTGGAGAAGAAAAAGAAGAAGGCCATACCCATAATCTTAATGGTAACAAGGAATCACATGAAGATCAGAGAGTACCTCTTCTAGGAAGCTACAACACACACAGACACAGTGCAGACAATGTATAA 1818 47.41 MLQMMEAAMPFTAMIMVESTDVIISTLIKAAMAKGMNNLVFLVYSNALATFLLLPFLLFSSRNNLGAPLSFSMILAFFLLGLNGSVGELLANTGINYSSPVLLSAMANLIPIFTFLLAVIFRMERLDLKRSSGKTKCLGTIIAVSGAFLITLYKGPVLIMSSSSQSVGQEAVALSQKPNWVFGGFLFLMAIFGGMVRTGVHTWCLQRKGPVFVAMFKPLGMVIAVALAVSFLRESLCLGRTEEPSLRSERKEMAGSGTYLMEAALPFPAMISMECINVGLNTLFKAATASGMSHHVFVVYSYSLAALLLLPSPFISRRSRRLPPLSFSVLSKIALLGLIGSSSQIMGYTGINYSSPTLASAISNLVPAFTFILAVIFRMEKVVLKRHSSQAKVMGTIISIAGAFVVTLYKGPRIILSSAPTALSLHHPLPSSHSNWTRIMKEYPDEATVIFFYNLTVAFIAAIVGVVLETDPSAWILKQHTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSVVGASIISIGFYTVMWGKAKEERGAGEEKEEGHTHNLNGNKESHEDQRVPLLGSYNTHRHSADNV 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7778603 7783810 + Cp4.1LG13g08860.1 Cpe13g00914 480112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00914 605 SUPERFAMILY Multidrug resistance efflux transporter EmrE 475 560 - -
Cpe13g00914 605 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 410 - -
Cpe13g00914 605 MobiDBLite consensus disorder prediction 563 585 - -
Cpe13g00914 605 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 153 - -
Cpe13g00914 605 Pfam EamA-like transporter family 26 151 IPR000620 GO:0016020|GO:0016021
Cpe13g00914 605 Pfam EamA-like transporter family 449 555 IPR000620 GO:0016020|GO:0016021
Cpe13g00914 605 Pfam EamA-like transporter family 278 407 IPR000620 GO:0016020|GO:0016021
Cpe13g00914 605 PANTHER WAT1-RELATED PROTEIN 7 187 IPR030184 GO:0016021|GO:0022857
Cpe13g00914 605 PANTHER WAT1-RELATED PROTEIN 263 574 IPR030184 GO:0016021|GO:0022857
Cpe13g00914 605 PANTHER WAT1-RELATED PROTEIN 195 239 IPR030184 GO:0016021|GO:0022857
Cpe13g00914 605 PANTHER WAT1-RELATED PROTEIN 263 574 - -
Cpe13g00914 605 PANTHER WAT1-RELATED PROTEIN 7 187 - -
Cpe13g00914 605 PANTHER WAT1-RELATED PROTEIN 195 239 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02361 Cpe13g00914 CCT
Cpe01g02361 Cpe13g00914 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00253 Cpe-Chr1:1462456 Cpe13g00914 Cpe-Chr13:7778603 3.05E-07 dispersed
Cpe13g00914 Cpe-Chr13:7778603 Cpe01g02280 Cpe-Chr1:19291497 2.50E-11 dispersed
Cpe01g02361 Cpe-Chr1:19749331 Cpe13g00914 Cpe-Chr13:7778603 3.32E-56 wgd
Cpe01g01403 Cpe-Chr1:8444814 Cpe13g00914 Cpe-Chr13:7778603 1.58E-07 wgd
Cpe13g00914 Cpe-Chr13:7778603 Cpe04g00563 Cpe-Chr4:6062359 8.26E-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00914 - - csv:101208880 530.406