Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00915 ATGTCACAAGGCTTTGCGATCGAGCTCTATTTCGATCCGGCGCTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTGGCTCGCCGTCAAATTAGTACCCAACTCATTGAAATTGAATCACGCCCTCACATTACCCTCTTCTCCAGCCCTTTTCTTGAACCCACAAAAGTTGAATCCATCGTTAAAAATTTCGCTTCTAAACAGGAACCCTTGCCACTGTCCTTATCGTCAATTGGTAGCCTTCCCAGTGACAACAACGTTCTATTTCTTGGTCCAGCACCTTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAATCGGGGAGGAATATCGTCCTGGCTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCCAGGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTACGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGGGAGCTGTTCTCTTTTGTTCTTGGCAACACTGTCGAAGCTTGA 552 47.1 MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRPGSWIPHCAVAQEVPRARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7784680 7785231 + Cp4.1LG13g08870.1 Cpe13g00915 480113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00915 183 SUPERFAMILY LigT-like 5 153 IPR009097 -
Cpe13g00915 183 PANTHER - 1 182 - -
Cpe13g00915 183 Pfam 2'-5' RNA ligase superfamily 41 155 - -
Cpe13g00915 183 Gene3D Cyclic phosphodiesterase 5 178 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00915 - - csv:101208638 345.51