Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00918 ATGGCTCCGAGCTCTGTTGTTGTTACAATTGAGAAGCATAACAGCTTCCCTTTAGTGGAAATCAATGGCTCTGATTCCTTGTTGCTTCCGGAGAAGCAGAAGGCTGCGAGTCCCAAGCAGCTCACGTGGGTTCTTCTTCTCAAAGCCCATAGAGCTCTGTTTTTCTTCTCGTGGATGGCGATGACTATGAAGGCGGTGTTTGCTTCTGTTAAGAAACGCATTGCTCATGCGGATATTAACGAAGAGGATTCCAAAAGCCGTAAGTTATATAGATTCATTAAGGCGTTTCTTGCGATTTCAATTACGGGTTTGATCGTCGAAGTTGTTGCTCATTTCAAAAAGTGGAATCTGCGAATGATTCAGCCATTGGAGCTCGAAGTTCATGGGATTATTCAATGGTTTTACGTCTCGTGGCTTTCGTTTCGTGTTGATTACATTGCGCCAATGGTTCTCATGCTTTCCAAATTCTGCATTGTTCTGTTCTTGATCCAATCTCTCGATCGCCTTGTTCTCTGCTTCGGCTGCTTTTGGATCAAATACAAGAAAATCAAACCCACGATTCAAGATAACGCTTATGATTTGGAAGATACTTCGAATTTTCCTTTGGTTCTTGTTCAAATCCCAATGTGTAATGAGAGAGAGGTCTATGCGCAATCGATTGCTGCTGCTTGTGAGCTTGACTGGCCGAGGAATCGGATTTTGATTCAAGTTCTTGATGATTCAGACGATGGAAATCTTCAGCGTTTGATCAAAGAAGAAGTTCTATCATGGAATGAAAAGGGTGCTAATATTGTTTATCGACATAGATTGATCCGAACTGGGTACAAAGCTGGGAATCTTCAGTCCGCCATGGCTTGTGATTATGTTAAAGATTATGAGTTCATAGCTATTTTAGATGCAGATTTCCAGCCCAACCCAGATTTCCTTAAGCTAACAATCCCTCATTTCAAGGGAAATCCTGAGGTGGGGCTTGTCCAAGCTCGTTGGGCGTTTGTTAACAAAGAAGAAAACTTGCTTACCAGACTCCAAAACATCAACTTGTGCTTCCACTTTGAAGTTGAGCAGCAAGTTAATGGGGTTTTTCTCAACTTCTTTGGATTCAATGGAACAGCAGGCGTTTGGAGAGCGAAAGCGCTTGAGGAATCCGGTGGCTGGCTCGAGCGCACGACGGTGGAGGACATGGATATCGCAGTTCGAGCACACTTGGAGGGATGGAAATTCATCTTCCTCAATGATGTCAAGGTGCTTTGTGAATTGCCTGAATCATATGAAGCTTACAAGAAACAGCAACACCGTTGGCATTCTGGTCCTATGCAGCTCTTCAGATTATGCCTTCCTTCCATCATTACTTCAAAGATATCAATATGGAAGAAGACGAACTTGATATTCCTGTTCTTCCTCTTAAGAAAACTCATACTTCCCTTTTACTCCTTCACTTTGTTCTGCATAATTCTTCCATTAACAATGTTCATTCCAGAAGCAGAGTTGCCTCTGTGGGTAATCTGCTACATCCCAGTGTTCATGTCCTTACTAAACATTCTCCCATCCCCAAAATCCTTCCCTTTCTTGATCCCATATCTCTTGTTTGAGAACACCATGTCAGTGACAAAGTTCAACGCCATGATTTCGGGGCTATTCCAGCTCGGAAGCTCATACGAATGGGTCGTGACAAAGAAAACAGGACGATCATCAGAATCCGACTTCCTAGCATTAGCCGAACGAGAGTCGAAAACATCGAACGAGGATAAGATTCTAAGGAGACATTCAGAGTCAGGGCTGGAGTTGTTGAGTAAATTGAACCAACAAGAGAAGCAAATGGCTTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAGCTGGCTCTTGCCTTTCTGCTGCTCACTGCAGCAGCCAGAAGCTTGCTGTCAGCTCATGGAGTTCACTTCTACTTCTTGCTGTTCCAAGGGTTGTCGTTCCTGGTGGTGGGTTTGGACTTGATTGGTGAGCAAATGAACTGA 1998 43.44 MAPSSVVVTIEKHNSFPLVEINGSDSLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWMAMTMKAVFASVKKRIAHADINEEDSKSRKLYRFIKAFLAISITGLIVEVVAHFKKWNLRMIQPLELEVHGIIQWFYVSWLSFRVDYIAPMVLMLSKFCIVLFLIQSLDRLVLCFGCFWIKYKKIKPTIQDNAYDLEDTSNFPLVLVQIPMCNEREVYAQSIAAACELDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGANIVYRHRLIRTGYKAGNLQSAMACDYVKDYEFIAILDADFQPNPDFLKLTIPHFKGNPEVGLVQARWAFVNKEENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRAKALEESGGWLERTTVEDMDIAVRAHLEGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMISGLFQLGSSYEWVVTKKTGRSSESDFLALAERESKTSNEDKILRRHSESGLELLSKLNQQEKQMASKKKRNKVYRKELALAFLLLTAAARSLLSAHGVHFYFLLFQGLSFLVVGLDLIGEQMN 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7791640 7794489 - Cp4.1LG13g08730.1 Cpe13g00918 480116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00918 665 Pfam Glycosyl transferase family group 2 295 500 IPR001173 -
Cpe13g00918 665 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 193 420 IPR029044 -
Cpe13g00918 665 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 2 664 - -
Cpe13g00918 665 SUPERFAMILY Nucleotide-diphospho-sugar transferases 203 503 IPR029044 -
Cpe13g00918 665 PANTHER - 2 664 - -
Cpe13g00918 665 Coils Coil 599 619 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02362 Cpe13g00918 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00399 Cpe-Chr6:2254365 Cpe13g00918 Cpe-Chr13:7791640 0 dispersed
Cpe12g01105 Cpe-Chr12:9147846 Cpe13g00918 Cpe-Chr13:7791640 1.52E-62 dispersed
Cpe13g00918 Cpe-Chr13:7791640 Cpe17g01126 Cpe-Chr17:8546138 1.39E-69 dispersed
Cpe01g02362 Cpe-Chr1:19755635 Cpe13g00918 Cpe-Chr13:7791640 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00918 K20887 - csv:101208151 1226.46