Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00930 ATGGATCTGTCCGGGAATAGCTTTTCCGGTGCGATCCCGCCGCATATTTGTAAGTGGCTTCCGTATTTGGTTAGCATAGATTTGTCGAACAATCAATTTACCGGCCCTATTCCGGCTGATCTCGCCGGGTGTTCTTATCTGAATTCGTTGATTTTGTCTGATAATGGGCTTTCTGGTACAATACCAGTTGAGCTCACGAGTTTGGGTAGGCTTAACAAGTTTTCCGTTGCGAACAATCATCTCACTGGTACGATTCCCTCCTTTTTTGATAAATTTGGGAAGGAGGATTTTGATGGGAACAGTGACTTATGTGGAGGGCCTGTTGGATCGAGTTGTGGCGGGTTGAGCAAGAAGAATCTTGCGATCATTATAGCTGCTGGTGTGTTTGGTGCTGCGGCTTCTCTGTTGTTAGGTTTTGGGTTGTGGTGGTGGTATCAATCTAGAATGAACATGAAGAAGAGAAGGGGATATCGGGATGGAATTAGTGGGGATTGGGCTGATAGATTGAGAGCCTATAAGCTTGTTCAAGTTTCCTTGTTTCAAAAGCCTCTTGTGAAAGTTAAATTGGCTGATTTGATGGCTGCTACTAACAATTTCAATTCTGAAAATATTATAGTTTCTTCTAGAACTGGGACTACTTATAGAGCTGTTCTTCCAGATGGCTCTGTGCTTGCTATAAAGCGGCTCAATACCTGCAAGCTTGGTGAGAAGCTGTTTCGAATGGAGATGAACCGAGAACTCGGGATTTCTACATCTTCTGGTGAGTTCTCAATGGCCCTTAATGCTAATCGTGTTGATTCCCGTCATAAGAACTTGTTTCGACATTTGTTTCGAATGGCTGATAAACTTGTTAGGATGTATATCATCTGTGTCAAGGATCCATTGAAACATCAAAACTTGAAGTCTTCATTCTTGTAA 918 42.59 MDLSGNSFSGAIPPHICKWLPYLVSIDLSNNQFTGPIPADLAGCSYLNSLILSDNGLSGTIPVELTSLGRLNKFSVANNHLTGTIPSFFDKFGKEDFDGNSDLCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYQSRMNMKKRRGYRDGISGDWADRLRAYKLVQVSLFQKPLVKVKLADLMAATNNFNSENIIVSSRTGTTYRAVLPDGSVLAIKRLNTCKLGEKLFRMEMNRELGISTSSGEFSMALNANRVDSRHKNLFRHLFRMADKLVRMYIICVKDPLKHQNLKSSFL 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7877322 7879230 + Cp4.1LG13g08710.1 Cpe13g00930 480128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00930 305 PANTHER RECEPTOR-LIKE PROTEIN 55 1 245 - -
Cpe13g00930 305 SUPERFAMILY L domain-like 2 92 - -
Cpe13g00930 305 Gene3D Ribonuclease Inhibitor 1 120 IPR032675 -
Cpe13g00930 305 Gene3D Phosphorylase Kinase; domain 1 160 250 - -
Cpe13g00930 305 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 245 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g01139 Cpe-Chr12:9366203 Cpe13g00930 Cpe-Chr13:7877322 3.99E-51 dispersed
Cpe13g00930 Cpe-Chr13:7877322 Cpe19g00558 Cpe-Chr19:4712113 9.15E-07 dispersed
Cpe01g02372 Cpe-Chr1:19835416 Cpe13g00930 Cpe-Chr13:7877322 7.02E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00930 - - cmos:111445255 468.003