Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00986 ATGGATGCGAATAGTTCGCGATTTCAGTCGTTTGGTCAAACCGAGATTAACTGGGACAAGCTTGATAAAGCAAAATTTTATGGCATCGGAGCTGGTCTCTTTACCGGGATTACAGTCGCACTGTACCCTGTTTCCGTTGTAAAAACAAGGATGCAGGTTGCTGTAAAGGATTCTGCAGAGAAAAACGCGGTGTCTGTTGTTAAAGGCTTACTTAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATCACTGGTGCAATTCCTGCAAGGATTATCTTTCTTACCGCTTTGGAGACGACCAAAGTGGGAGCCTTTAAAATGGTTGAGCCATTTAAATTTTCTGAACCCTCACAGGCTGCTATAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTCTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCGGGTAATGCAAGATATAATGGGGGCTTAGATGTTGCTCGTAAACTGATAAAGTCCGATGGCATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATAACCTACTCTCCATCTAGTGCTGTATGGTTCTTAGGCCAAAACTCAGCTTCTGAGAGCTTTGCTCCAAGCCATACCCAACTTATTTCAGTGCAAGCTGGTGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACCATAAAGACTCGCTTACAGGTGATGGGCGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTAATCGCTGAGGATGGATGGAAAGGTTTCTACAGGGGGCTGGGTCCTCGGTTCTTCAGTATGTCAGCCTGGGGAACCTCCATGATATTGGCTTACGAGTACTTAAAGCGCTTGTGTGCAAATGATGAACAGAGTTGA 927 44.12 MDANSSRFQSFGQTEINWDKLDKAKFYGIGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNAVSVVKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPFKFSEPSQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNARYNGGLDVARKLIKSDGIRGLYKGFGLSVITYSPSSAVWFLGQNSASESFAPSHTQLISVQAGGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLKRLCANDEQS 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8149902 8153909 - Cp4.1LG13g07990.1 Cpe13g00986 480184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00986 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 107 IPR018108 -
Cpe13g00986 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 301 IPR018108 -
Cpe13g00986 308 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 305 - -
Cpe13g00986 308 Pfam Mitochondrial carrier protein 30 106 IPR018108 -
Cpe13g00986 308 Pfam Mitochondrial carrier protein 225 304 IPR018108 -
Cpe13g00986 308 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Cpe13g00986 308 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Cpe13g00986 308 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Cpe13g00986 308 PRINTS Mitochondrial carrier protein signature 226 248 IPR002067 GO:0055085
Cpe13g00986 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Cpe13g00986 308 Gene3D Mitochondrial carrier domain 30 308 IPR023395 -
Cpe13g00986 308 SUPERFAMILY Mitochondrial carrier 19 298 IPR023395 -
Cpe13g00986 308 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 305 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02433 Cpe13g00986 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00598 Cpe-Chr12:5973612 Cpe13g00986 Cpe-Chr13:8149902 1.14E-79 dispersed
Cpe13g00986 Cpe-Chr13:8149902 Cpe17g00470 Cpe-Chr17:3502403 7.19E-73 dispersed
Cpe03g01311 Cpe-Chr3:10613913 Cpe13g00986 Cpe-Chr13:8149902 1.88E-96 transposed
Cpe01g02433 Cpe-Chr1:20187854 Cpe13g00986 Cpe-Chr13:8149902 2.58E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00986 K15121 - csv:101206140 563.148