Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe13g01009 | ATGGCTTCACCTTCTCCTTCTCCGGCGGCGGAGTCTGCCATATCTTCCTCATCTCCTACATCTTCTGAGCCTAATCAGTCTGGTGAACCTCCTTCTTCATCTTCTAGTTCTTCAGCTCCGCCTCCTCAGTCACCACCACCAGCAGTTTCTGATGCTCCTCCTCCTTCTCCTCCATTGATAGCATCACCACCTGCACCACCAATATCCCCTCCTTCACCCCTTGCTGGTTCACCGTCTTCGCCTCCACAATCTTTGCCCTCACCGCCGCCACCTTCAGCATCAACCTCCCCACCACCACATTCAGCATCCTCCTCTGCACCACCACCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACATCGACCTCTCCACCACCGCCTTCAAGATCAACCTCTCCACCACCACGTTCATCAACATCACCACCACCTTCCTCTGCATCACCTCCTCCCCCAAAACAATCCGTTTCCTATCCTCCTCCTCCCGAAGCTTCACCTCCCCCTTCTGATTTATCACCTCCGCCACCACCACCACCAGCAGGTGGTTCTCCCCCTCCTCTATCCAATCCTAGACCTCCACCTTCTACTCCCCCTCCCCCTCCCCCTGATATTATTTCACCTTCTCCTCCTCCATCAGCTAATGTCCCAACGCCACCTTCATCAACAGGAGAATCACCGAAAGTATCTCCTCCATCCCACAAGGCATCTCCTCCTCCTCCTGATCATAGCTCCCCTCCACCAAGATCTACAGTACCATCGCCCCCTCCTTCAGTCCCTTCATCATCTGCTCCTCCTCCAGTTAGTGATCCTGGTTCTCCAACCAATTCATCAGGGGGAAGTCCTGTTGCCCCTTCAACTTCTGTTACACCAGAACGGCCAATTCCAATAATCAATGGTACCAGTGTTGCAACAAATACCCCAACCACTGGTAAAAGGGGTTTCAGCACTGGAACATTTGTGGCAGTTGGCAGCGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCAATTTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCGTGCCTTCTCCTTTTTCCTCCCAAAACTCAGATGCCTTTTTCCTAAGAGCCCATTCTTTAGCTAATGTGGTTGGAAGTCGAACCGATAGCGATTTCAAGTATGCGTCATCAGAAGGAGGTGGAGTAGGTAATTCAAGATCGTTTGCTTATGAAGAGCTACACCAGGCCACAAGTGGGTTTTCATTGAATAGTCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAGAGGCACCCTTGCAGATGGACGAGATGTAGCCGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCTGAAGTTGAAATTATTAGCCGAGTACACCATCGACATTTGGTTTCCTTGGTTGGTTACTGTATCTCTGACCATCAAAGATTGCTTGTCTATGACTATGTTCCAAACAATACCCTTCATTATCATCTGCACGGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTCGAAGCTCAGGTCGCAGATTTCGGGCTTGCTAAATTGGCATTGGATTCACTGACTCATGTAACGACTCGTGTTATGGGAACCTTTGGCTGTGCTTTAAGTACTAAAGCTCGACCGCTGCTGGCACAAGCTATTGAGGATGAGAACTTTGAAGAATTGGTGGATCCAAGGCTAGACAACAATTATGTCGACAGAGAAATGTTCCGAATGATCGAAGCAGCTGCTGCCTGCGTTCGTCATTCAGCCGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTTCAAATGGGGTGAAACCTGGGCAGAGTGAAGTGTTTGATTCAGCTGAACATTCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTACAGTTATGGTTACTCCGATCGAGATCGAGATCGGAGTCGAAGTCATAGTCGAAGTCAGAGTAGCTGGAGTAGAGAATCGAGAGATCAAAGTCCATCGGTGCCTAATAATCGATCCCGGCACGTCTGA | 2151 | 48.81 | MASPSPSPAAESAISSSSPTSSEPNQSGEPPSSSSSSSAPPPQSPPPAVSDAPPPSPPLIASPPAPPISPPSPLAGSPSSPPQSLPSPPPPSASTSPPPHSASSSAPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSPPPPSRSTSPPPRSSTSPPPSSASPPPPKQSVSYPPPPEASPPPSDLSPPPPPPPAGGSPPPLSNPRPPPSTPPPPPPDIISPSPPPSANVPTPPSSTGESPKVSPPSHKASPPPPDHSSPPPRSTVPSPPPSVPSSSAPPPVSDPGSPTNSSGGSPVAPSTSVTPERPIPIINGTSVATNTPTTGKRGFSTGTFVAVGSVVGVLVLSLVIMAIWFVQKRKRRKKNIPYTVPSPFSSQNSDAFFLRAHSLANVVGSRTDSDFKYASSEGGGVGNSRSFAYEELHQATSGFSLNSLLGEGGFGCVYRGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYVPNNTLHYHLHGHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSLTHVTTRVMGTFGCALSTKARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLSNGVKPGQSEVFDSAEHSAQIRMFQRMAFGSQDYSYGYSDRDRDRSRSHSRSQSSWSRESRDQSPSVPNNRSRHV | 716 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8308041 | 8313397 | + | Cp4.1LG13g07900.1 | Cpe13g01009 | 480207 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe13g01009 | 716 | Gene3D | Phosphorylase Kinase; domain 1 | 403 | 506 | - | - | |
Cpe13g01009 | 716 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 522 | 534 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe13g01009 | 716 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 574 | 689 | - | - | |
Cpe13g01009 | 716 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 519 | 567 | - | - | |
Cpe13g01009 | 716 | ProSitePatterns | Protein kinases ATP-binding region signature. | 437 | 459 | IPR017441 | GO:0005524 | |
Cpe13g01009 | 716 | MobiDBLite | consensus disorder prediction | 1 | 326 | - | - | |
Cpe13g01009 | 716 | ProSiteProfiles | Protein kinase domain profile. | 431 | 716 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe13g01009 | 716 | Pfam | Protein tyrosine and serine/threonine kinase | 433 | 519 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe13g01009 | 716 | MobiDBLite | consensus disorder prediction | 698 | 716 | - | - | |
Cpe13g01009 | 716 | Gene3D | Transferase(Phosphotransferase) domain 1 | 570 | 651 | - | - | |
Cpe13g01009 | 716 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 150 | 518 | - | - | |
Cpe13g01009 | 716 | Gene3D | Transferase(Phosphotransferase) domain 1 | 514 | 569 | - | - | |
Cpe13g01009 | 716 | MobiDBLite | consensus disorder prediction | 35 | 234 | - | - | |
Cpe13g01009 | 716 | MobiDBLite | consensus disorder prediction | 678 | 697 | - | - | |
Cpe13g01009 | 716 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 150 | 518 | - | - | |
Cpe13g01009 | 716 | MobiDBLite | consensus disorder prediction | 289 | 326 | - | - | |
Cpe13g01009 | 716 | SMART | serkin_6 | 431 | 635 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe13g01009 | 716 | MobiDBLite | consensus disorder prediction | 248 | 288 | - | - | |
Cpe13g01009 | 716 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 574 | 689 | - | - | |
Cpe13g01009 | 716 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 519 | 567 | - | - | |
Cpe13g01009 | 716 | SUPERFAMILY | Protein kinase-like (PK-like) | 414 | 634 | IPR011009 | - | |
Cpe13g01009 | 716 | MobiDBLite | consensus disorder prediction | 676 | 716 | - | - | |
Cpe13g01009 | 716 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe09g00505 | Cpe-Chr9:3353628 | Cpe13g01009 | Cpe-Chr13:8308041 | 2.50E-95 | dispersed | |
Cpe13g01009 | Cpe-Chr13:8308041 | Cpe18g00431 | Cpe-Chr18:5399968 | 3.25E-106 | dispersed | |
Cpe01g01532 | Cpe-Chr1:9173119 | Cpe13g01009 | Cpe-Chr13:8308041 | 1.67E-49 | wgd | |
Cpe13g01009 | Cpe-Chr13:8308041 | Cpe09g00257 | Cpe-Chr9:1497415 | 1.17E-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62809 | PF07714 | PK_Tyr_Ser-Thr | 7.80E-14 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe13g01009 | - | - | csv:101211665 | 646.351 |