Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g01009 ATGGCTTCACCTTCTCCTTCTCCGGCGGCGGAGTCTGCCATATCTTCCTCATCTCCTACATCTTCTGAGCCTAATCAGTCTGGTGAACCTCCTTCTTCATCTTCTAGTTCTTCAGCTCCGCCTCCTCAGTCACCACCACCAGCAGTTTCTGATGCTCCTCCTCCTTCTCCTCCATTGATAGCATCACCACCTGCACCACCAATATCCCCTCCTTCACCCCTTGCTGGTTCACCGTCTTCGCCTCCACAATCTTTGCCCTCACCGCCGCCACCTTCAGCATCAACCTCCCCACCACCACATTCAGCATCCTCCTCTGCACCACCACCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACATCGACCTCTCCACCACCGCCTTCAAGATCAACCTCTCCACCACCACGTTCATCAACATCACCACCACCTTCCTCTGCATCACCTCCTCCCCCAAAACAATCCGTTTCCTATCCTCCTCCTCCCGAAGCTTCACCTCCCCCTTCTGATTTATCACCTCCGCCACCACCACCACCAGCAGGTGGTTCTCCCCCTCCTCTATCCAATCCTAGACCTCCACCTTCTACTCCCCCTCCCCCTCCCCCTGATATTATTTCACCTTCTCCTCCTCCATCAGCTAATGTCCCAACGCCACCTTCATCAACAGGAGAATCACCGAAAGTATCTCCTCCATCCCACAAGGCATCTCCTCCTCCTCCTGATCATAGCTCCCCTCCACCAAGATCTACAGTACCATCGCCCCCTCCTTCAGTCCCTTCATCATCTGCTCCTCCTCCAGTTAGTGATCCTGGTTCTCCAACCAATTCATCAGGGGGAAGTCCTGTTGCCCCTTCAACTTCTGTTACACCAGAACGGCCAATTCCAATAATCAATGGTACCAGTGTTGCAACAAATACCCCAACCACTGGTAAAAGGGGTTTCAGCACTGGAACATTTGTGGCAGTTGGCAGCGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCAATTTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCGTGCCTTCTCCTTTTTCCTCCCAAAACTCAGATGCCTTTTTCCTAAGAGCCCATTCTTTAGCTAATGTGGTTGGAAGTCGAACCGATAGCGATTTCAAGTATGCGTCATCAGAAGGAGGTGGAGTAGGTAATTCAAGATCGTTTGCTTATGAAGAGCTACACCAGGCCACAAGTGGGTTTTCATTGAATAGTCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAGAGGCACCCTTGCAGATGGACGAGATGTAGCCGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCTGAAGTTGAAATTATTAGCCGAGTACACCATCGACATTTGGTTTCCTTGGTTGGTTACTGTATCTCTGACCATCAAAGATTGCTTGTCTATGACTATGTTCCAAACAATACCCTTCATTATCATCTGCACGGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTCGAAGCTCAGGTCGCAGATTTCGGGCTTGCTAAATTGGCATTGGATTCACTGACTCATGTAACGACTCGTGTTATGGGAACCTTTGGCTGTGCTTTAAGTACTAAAGCTCGACCGCTGCTGGCACAAGCTATTGAGGATGAGAACTTTGAAGAATTGGTGGATCCAAGGCTAGACAACAATTATGTCGACAGAGAAATGTTCCGAATGATCGAAGCAGCTGCTGCCTGCGTTCGTCATTCAGCCGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTTCAAATGGGGTGAAACCTGGGCAGAGTGAAGTGTTTGATTCAGCTGAACATTCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTACAGTTATGGTTACTCCGATCGAGATCGAGATCGGAGTCGAAGTCATAGTCGAAGTCAGAGTAGCTGGAGTAGAGAATCGAGAGATCAAAGTCCATCGGTGCCTAATAATCGATCCCGGCACGTCTGA 2151 48.81 MASPSPSPAAESAISSSSPTSSEPNQSGEPPSSSSSSSAPPPQSPPPAVSDAPPPSPPLIASPPAPPISPPSPLAGSPSSPPQSLPSPPPPSASTSPPPHSASSSAPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSPPPPSRSTSPPPRSSTSPPPSSASPPPPKQSVSYPPPPEASPPPSDLSPPPPPPPAGGSPPPLSNPRPPPSTPPPPPPDIISPSPPPSANVPTPPSSTGESPKVSPPSHKASPPPPDHSSPPPRSTVPSPPPSVPSSSAPPPVSDPGSPTNSSGGSPVAPSTSVTPERPIPIINGTSVATNTPTTGKRGFSTGTFVAVGSVVGVLVLSLVIMAIWFVQKRKRRKKNIPYTVPSPFSSQNSDAFFLRAHSLANVVGSRTDSDFKYASSEGGGVGNSRSFAYEELHQATSGFSLNSLLGEGGFGCVYRGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYVPNNTLHYHLHGHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSLTHVTTRVMGTFGCALSTKARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLSNGVKPGQSEVFDSAEHSAQIRMFQRMAFGSQDYSYGYSDRDRDRSRSHSRSQSSWSRESRDQSPSVPNNRSRHV 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8308041 8313397 + Cp4.1LG13g07900.1 Cpe13g01009 480207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g01009 716 Gene3D Phosphorylase Kinase; domain 1 403 506 - -
Cpe13g01009 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Cpe13g01009 716 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 574 689 - -
Cpe13g01009 716 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 519 567 - -
Cpe13g01009 716 ProSitePatterns Protein kinases ATP-binding region signature. 437 459 IPR017441 GO:0005524
Cpe13g01009 716 MobiDBLite consensus disorder prediction 1 326 - -
Cpe13g01009 716 ProSiteProfiles Protein kinase domain profile. 431 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g01009 716 Pfam Protein tyrosine and serine/threonine kinase 433 519 IPR001245 GO:0004672|GO:0006468
Cpe13g01009 716 MobiDBLite consensus disorder prediction 698 716 - -
Cpe13g01009 716 Gene3D Transferase(Phosphotransferase) domain 1 570 651 - -
Cpe13g01009 716 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 150 518 - -
Cpe13g01009 716 Gene3D Transferase(Phosphotransferase) domain 1 514 569 - -
Cpe13g01009 716 MobiDBLite consensus disorder prediction 35 234 - -
Cpe13g01009 716 MobiDBLite consensus disorder prediction 678 697 - -
Cpe13g01009 716 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 150 518 - -
Cpe13g01009 716 MobiDBLite consensus disorder prediction 289 326 - -
Cpe13g01009 716 SMART serkin_6 431 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g01009 716 MobiDBLite consensus disorder prediction 248 288 - -
Cpe13g01009 716 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 574 689 - -
Cpe13g01009 716 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 519 567 - -
Cpe13g01009 716 SUPERFAMILY Protein kinase-like (PK-like) 414 634 IPR011009 -
Cpe13g01009 716 MobiDBLite consensus disorder prediction 676 716 - -
Cpe13g01009 716 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00505 Cpe-Chr9:3353628 Cpe13g01009 Cpe-Chr13:8308041 2.50E-95 dispersed
Cpe13g01009 Cpe-Chr13:8308041 Cpe18g00431 Cpe-Chr18:5399968 3.25E-106 dispersed
Cpe01g01532 Cpe-Chr1:9173119 Cpe13g01009 Cpe-Chr13:8308041 1.67E-49 wgd
Cpe13g01009 Cpe-Chr13:8308041 Cpe09g00257 Cpe-Chr9:1497415 1.17E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62809 PF07714 PK_Tyr_Ser-Thr 7.80E-14 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g01009 - - csv:101211665 646.351