Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe13g01013 | ATGGCGGTTCCCGCTGTTCAGTTCCCGATTTTCATGGCTGTCAGAGTGCTCGGGATGGTTGTGGCAGCTCTTGTGTTCATTTGGACCTTGCATTTCCGTGGAGGTTTGGCACTTAGCTCAGACAACAAGGATCTCATCTTCAATGTTCATCCTGTTCTTATGGTGATTGGACTTATTCTTCTAAATGGTGAAGATTATGAAATTACATCCCAACTAAAGTGGGGTGCAGGATTTGTGACCTTTTGGTACCCCGGTGGCTCCAGAAACAGCAGAGCTACTCTGTTGCCATGGCATGTTTTCTTTGGCGTTTACATATATGGCCTTTGCATTGCTACAACTGTTACTGGATTGTTGGAAAAAGCTACCTTCCTTCAAACCAGTAAGGTAATATTACGCTATTCTAATGAGGCTTTGCTGATAAATTCATTGGGTATCTTCGTTGTTGTATTGGGTGGCCTCGTAATTCTTGCGGTTATCGCTTGGTCGAACGACAAAGGTGACGTTTACAGAGGGCCAGCAGAGTAG | 525 | 44.76 | MAVPAVQFPIFMAVRVLGMVVAALVFIWTLHFRGGLALSSDNKDLIFNVHPVLMVIGLILLNGEDYEITSQLKWGAGFVTFWYPGGSRNSRATLLPWHVFFGVYIYGLCIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGIFVVVLGGLVILAVIAWSNDKGDVYRGPAE | 174 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 8342520 | 8345812 | + | Cp4.1LG13g07920.1 | Cpe13g01013 | 480211 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe13g01013 | 174 | ProSiteProfiles | Cytochrome b561 domain profile. | 1 | 159 | IPR006593 | - | |
| Cpe13g01013 | 174 | PANTHER | CYTOCHROME B561-RELATED | 1 | 65 | IPR043205 | GO:0016491 | |
| Cpe13g01013 | 174 | PANTHER | CYTOCHROME B561-RELATED | 72 | 170 | IPR043205 | GO:0016491 | |
| Cpe13g01013 | 174 | PANTHER | B561, PUTATIVE-RELATED | 1 | 65 | - | - | |
| Cpe13g01013 | 174 | PANTHER | B561, PUTATIVE-RELATED | 72 | 170 | - | - | |
| Cpe13g01013 | 174 | Pfam | Eukaryotic cytochrome b561 | 71 | 123 | IPR006593 | - | |
| Cpe13g01013 | 174 | Gene3D | - | 68 | 171 | - | - | |
| Cpe13g01013 | 174 | Gene3D | - | 2 | 66 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe01g02464 | Cpe13g01013 | CCT | |
| Cpe01g02464 | Cpe13g01013 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe13g01013 | Cpe-Chr13:8342520 | Cpe15g00317 | Cpe-Chr15:4141089 | 5.50E-19 | dispersed | |
| Cpe01g02464 | Cpe-Chr1:20393378 | Cpe13g01013 | Cpe-Chr13:8342520 | 3.75E-35 | wgd | |
| Cpe13g01013 | Cpe-Chr13:8342520 | Cpe09g00268 | Cpe-Chr9:1559055 | 1.97E-16 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe13g01013 | K08360 | - | tcc:18602102 | 202.601 |