Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g01079 ATGGATGCATTCGTTGCCGGTGGATCCACGGCGGCATTCGGACAAACAGGATCATCTTCGGCCTCTAACCATTTTTGCTGGGCTGATCTTTGCAACTGGGTGCGGTGCGTTAATGGCGTTTTTGGTGCTGTTCATGTGGGCAATTACGAGGAAGGTTTTTGGGAGATTGTTATCCAGTTCATGGAACGGAAGAAATTCCGACTTCTGATATTAATTCTGGTGCGCTCTTCTGGGCGGGAAGATATAGAGATAAATAACCATATTTCCATTACTGACTCGAACATAATTGAGGTGGGTGCAAACATCGTTGAGAAGGGAATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCTTTAGAGTATAACGAGTCCAAGTTGGCGGCAATTATGGCATCTTTCATCATTCAAAAACCTCGGCAAAGGTCACCTTTTATCAAAGCTGCCCTAAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTGGATATGTATCGTACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAACATAAATGAGGGTGATGCTCACTCAAAGGGATGGCTTGGTTCTAGGACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTCCTAATTTTGAGTGAGAAACTTCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCACGAAGAAAACCAAACCAAATAAATAAACCACGCTCTGCCAATACCTTTGCCTATAATGGTACAGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAATTTCTTTATGAACAGGCTGTTGAAGCTACGAAGAACGTCGAGCTTGGTAATAAAGAACTTTCCCAAGCAATTCAGCGGAATAGCAGCAGCAGAACCTTCCTTCTTCTATTTCTGTTTGTGCTCACCTTTTCAATTATCTTTCTTGATTGGTATAGCTGA 1248 41.99 MDAFVAGGSTAAFGQTGSSSASNHFCWADLCNWVRCVNGVFGAVHVGNYEEGFWEIVIQFMERKKFRLLILILVRSSGREDIEINNHISITDSNIIEVGANIVEKGMAKFRDRTEDFKDVVRHCAISLEYNESKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQLDILKNNINEGDAHSKGWLGSRTDDSNADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKPNQINKPRSANTFAYNGTELREPDNFEHQPVRAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIIFLDWYS 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8727540 8731267 - Cp4.1LG13g07170.1 Cpe13g01079 480277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g01079 415 Pfam SNARE-complex protein Syntaxin-18 N-terminus 112 192 IPR019529 -
Cpe13g01079 415 PANTHER SYNTAXIN-18 111 415 - -
Cpe13g01079 415 PANTHER SYNTAXIN-18 111 415 - -
Cpe13g01079 415 SUPERFAMILY t-snare proteins 167 379 IPR010989 GO:0016020|GO:0016192
Cpe13g01079 415 Gene3D - 317 412 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02531 Cpe13g01079 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02531 Cpe-Chr1:20745792 Cpe13g01079 Cpe-Chr13:8727540 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g01079 K08492 - csv:101207161 567.77