Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g01098 ATGGCATCCTTTTCCAGACGCCTACTCCTCTTTGCGGCGGCGCTACTCGCCGCCGCTGAAATCGCAACCTCCGCCAACCGATGCCCAGACTGCGGAGCTACCGGCGTTCCCTATCCTCTGAGCACCAGCCCCACATGTGGGGATCAATCGTACAAGATCCGGTGCGACGCAGGCTCACTGAAATTCGATACGCTGAACAATACGTACCCGATCATCGCGATCAACCCATCGGCCCAACGGCTGGTGATCCGGCCGTCTAACTTCCTCCGAGAAACGTGCGTGACAGAGGATATTGCTCACGGAGGAATCCAACTGAACAACAGTTTACCCTTCAACGTCACGAGCGGGAACACGATCCTGTACTTCAACTGCACGGATTCGCTTCTGCGCTCGCCGTTGAACTGCTCGTCAACGAGTTTGTGCCATTCGTACATCAACGGCTCGAGAGGGGCGGCGGCGTGCGAGGCGGCGCCACTGTGCTGCACGTTTCGGGCGGGTGGGTCATCGAATTCGTACATGATTCGGGTGAGGGAGTCGGGGTGCAGCGCGTACACGAGCTTTGTGAACTTGAACCCGAGTTTAGGACTGTTGCAATGGCCTGAACCCGGGTTGGAGCTGCAATGGCTTTCGCCGATGGAGCCGGTTTGTAATTCGCAGGCTGATTGTGATGGGAACGCGGCTTGTGGTGTTGACCCAAGTGGGACCGGGCTGAAACGTTGTCTCTGTAATTCAGGGTTTCAGTGGGACCCTGTTGCTGGACTCTGCTCCCAAAACACGTGTCATGATCCTGACGGTTGTAAGAAGTCCCGAACTGCACTAATAGCCGGCATTGTATCCGGCGTCGGCGCGGCGGTGTTATTGTCAATAATAGCCATGTTAGTATACAGACGACATAGAAGAGCGAAAGAAGCTCAAGATCGCTTAACAAAGGAGCGTGAAGCAATTCTGAATTCCAACGGCGGAGGCGGAAGGAACGCAAAGATCTTCTCCGGAAAAGAGATCAAGAGGGCCACCCACAATTTCTCCGCCGATCGCCTCCTGGGTGTCGGCGGCTATGGTGAGGTCTACAAAGGCATTCTTGGGGACGGTACCCCTGTAGCCGTGAAGTGCGCCAAGCTCGGAAACGCAAAAGGCACCGACCAAGTCCTGAATGAGGTCCGAATACTCTGCCAAGTTAACCACCGGAGTCTTGTGTGGCTCCTTGGGTGCTGCGTTGAATTAGAACAGCCAATTCTGGTGTACGAGTATATCCCCAACGGCACTCTTCTGGACCATTTGCAAGGTAGTAAAGAGACAAGGGCATTAACATGGGAGCAGCGGCTCCAGATCGCGCAGAGCACAGCAGAGGGACTAGCATACCTTCATTTCTCAGCAGTTCCACCAATCTACCACCGAGACGTGAAATCCAGCAACATCCTACTAGACAATAAGCTAAACTCCAAAGTTTCGGATTTCGGCCTCTCCCGATTGGCGGAAACAGATTTAAGCCATATCTCAACTTGCGCGCAGGGTACTCTGGGGTACCTGGACCCTGAGTACTACCGGAACTACCAGTTGACGGACAAGAGCGACGTGTACAGTTTCGGAGTGGTTCTTTTGGAGCTGTTGACGTCGCAGAAGGCCATCGATTTCAACCGGGAGCCTGACGACGTGAACTTGGCGGTATACGTGCAGCGGATGGTGGAAGAAGAGAAATTGGTGGATGTCATCGATCCGAGGCTGAAGAAGGGAGCCACGGACATGGAGGTTGACACGATGAAGGCTTTGGGGTTTCTGGCAGTGGGATGCTTGGAAGAGAGAAGGCAGAATCGGCCTTCCATGAAAGAAGTGGTGGAGGAGATTCAGTACATCATAAGCGTCGCCACTGCCAAGCCTTAA 1878 54.21 MASFSRRLLLFAAALLAAAEIATSANRCPDCGATGVPYPLSTSPTCGDQSYKIRCDAGSLKFDTLNNTYPIIAINPSAQRLVIRPSNFLRETCVTEDIAHGGIQLNNSLPFNVTSGNTILYFNCTDSLLRSPLNCSSTSLCHSYINGSRGAAACEAAPLCCTFRAGGSSNSYMIRVRESGCSAYTSFVNLNPSLGLLQWPEPGLELQWLSPMEPVCNSQADCDGNAACGVDPSGTGLKRCLCNSGFQWDPVAGLCSQNTCHDPDGCKKSRTALIAGIVSGVGAAVLLSIIAMLVYRRHRRAKEAQDRLTKEREAILNSNGGGGRNAKIFSGKEIKRATHNFSADRLLGVGGYGEVYKGILGDGTPVAVKCAKLGNAKGTDQVLNEVRILCQVNHRSLVWLLGCCVELEQPILVYEYIPNGTLLDHLQGSKETRALTWEQRLQIAQSTAEGLAYLHFSAVPPIYHRDVKSSNILLDNKLNSKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFNREPDDVNLAVYVQRMVEEEKLVDVIDPRLKKGATDMEVDTMKALGFLAVGCLEERRQNRPSMKEVVEEIQYIISVATAKP 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8857398 8864581 - Cp4.1LG13g11080.1 Cpe13g01098 480296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g01098 625 SUPERFAMILY Protein kinase-like (PK-like) 326 613 IPR011009 -
Cpe13g01098 625 SMART serkin_6 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g01098 625 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Cpe13g01098 625 Gene3D Phosphorylase Kinase; domain 1 317 416 - -
Cpe13g01098 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Cpe13g01098 625 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g01098 625 CDD STKc_IRAK 347 615 - -
Cpe13g01098 625 Gene3D Transferase(Phosphotransferase) domain 1 417 624 - -
Cpe13g01098 625 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 622 IPR045274 GO:0007166
Cpe13g01098 625 PANTHER OS05G0318100 PROTEIN 17 622 - -
Cpe13g01098 625 Pfam Protein tyrosine and serine/threonine kinase 344 613 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00871 Cpe-Chr2:5850147 Cpe13g01098 Cpe-Chr13:8857398 4.31E-24 dispersed
Cpe10g00403 Cpe-Chr10:2352376 Cpe13g01098 Cpe-Chr13:8857398 1.95E-16 dispersed
Cpe11g00178 Cpe-Chr11:967406 Cpe13g01098 Cpe-Chr13:8857398 8.58E-89 dispersed
Cpe11g00892 Cpe-Chr11:7192420 Cpe13g01098 Cpe-Chr13:8857398 1.00E-43 dispersed
Cpe13g00648 Cpe-Chr13:6169828 Cpe13g01098 Cpe-Chr13:8857398 2.50E-25 dispersed
Cpe13g01098 Cpe-Chr13:8857398 Cpe13g01140 Cpe-Chr13:9070975 4.90E-78 dispersed
Cpe18g00696 Cpe-Chr18:6922562 Cpe13g01098 Cpe-Chr13:8857398 1.83E-66 dispersed
Cpe20g00348 Cpe-Chr20:1967796 Cpe13g01098 Cpe-Chr13:8857398 2.68E-07 dispersed
Cpe13g01098 Cpe-Chr13:8857398 Cpe19g00335 Cpe-Chr19:2960450 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62812 PF07714 PK_Tyr_Ser-Thr 4.80E-45 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g01098 - - csv:101220186 1077.77