Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g01124 ATGGCCATGGGAGCTTTGTGGAGGGCTTTGGTTCTGGCTGTGCTTCTTGTGGCGGCTACTGTCGAGAGAACAGACGCACAATTAGTAGAGAATTTCTACGCCTCCACTTGTCCCAACGTGGAGCAAATCGTTACACAAGCTGTTCAAAACAAGTTTGATCAAACCTTCGTCACCGTCCCTGCAACTTTGCGACTCTTCTTCCATGATTGCTTCGTTGAGGGTTGTGATGCTTCGGTGTTGATAGCATCTCCCAATGGGGATGCAGAGAAAGATGCTAAAGACAATATTTCATTAGCAGGGGATGGATTTGACACGGTTATTAAAGCTAAACAAGCGGTTGAAAGTGCTTGTCCTGGTGTTGTCTCTTGTGCTGACGTTTTGGCTCTTGCAACTAGAGATGTCGTTAATTTGGCAGGGGGCCCACTGTACAGCGTGGAACTAGGACGTCGAGATGGGCTAATTTCCCGAGCATCCCGAGTGGCCGGAAACTTACCGGAGCCATTCTTCGATCTGGACCAACTGGTCAACATGTTCGCCGCTCACAACCTGACCCTCATCGACATGATCGCCCTCTCCGGAGCCCACACCTTGGGCTTCTCCCACTGCGACCGTTTCTCCAACCGTCTCTACTCCTTTTCCCCTTCGTCTCCGGTGGACCCGTCGTTGGACCCCGGCTACGCGCAGCAGCTAATGGATGCAAAATAA 705 51.35 MAMGALWRALVLAVLLVAATVERTDAQLVENFYASTCPNVEQIVTQAVQNKFDQTFVTVPATLRLFFHDCFVEGCDASVLIASPNGDAEKDAKDNISLAGDGFDTVIKAKQAVESACPGVVSCADVLALATRDVVNLAGGPLYSVELGRRDGLISRASRVAGNLPEPFFDLDQLVNMFAAHNLTLIDMIALSGAHTLGFSHCDRFSNRLYSFSPSSPVDPSLDPGYAQQLMDAK 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8998396 8999785 + Cp4.1LG13g11180.1 Cpe13g01124 480322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g01124 234 PANTHER PEROXIDASE 10 233 - -
Cpe13g01124 234 Gene3D Peroxidase, domain 2 165 231 - -
Cpe13g01124 234 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PANTHER - 10 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 Pfam Peroxidase 45 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 CDD secretory_peroxidase 27 230 IPR033905 GO:0004601|GO:0042744
Cpe13g01124 234 ProSiteProfiles Plant heme peroxidase family profile. 27 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g01124 234 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cpe13g01124 234 Gene3D - 31 164 - -
Cpe13g01124 234 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cpe13g01124 234 SUPERFAMILY Heme-dependent peroxidases 27 231 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00820 Cpe-Chr9:7586042 Cpe13g01124 Cpe-Chr13:8998396 1.76E-72 dispersed
Cpe13g01124 Cpe-Chr13:8998396 Cpe19g00257 Cpe-Chr19:2135988 4.17E-79 dispersed
Cpe13g01124 Cpe-Chr13:8998396 Cpe19g00661 Cpe-Chr19:5296903 4.78E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g01124 K00430 - csv:101213580 379.793