Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g01125 ATGGGTATGTGTAATGAGAAACTTGTGGGATTTTTGAACAATAGGTGGTTGGTTTTTGTGGCTGCAATATGGGTTCAATCTTGCGCGGGAATCGGGTATCTTTTCGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAGTCAGAGGCAAATTGCGCGGCTCGGTGTGGCGAAAGACCTTGGGGATAGTGTCGGTACTCTAGCTGGAACCTTGTTGGAGATATTGCCCTTCTGGGCAACTCTGTTGGTCGGTGCTATCAGTAACTTTGTCGGGTATGGTTGGATTTGGCTCATCGTCACTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCATTCTTGTATTTGTGGGAACGAATGGGGAGACTTACTTCAATACAGTTTCTCTGGTTTCTTGCGTACAAAACTTTCCAAAAAGCAGGGGTCCTGTGGTTGGGATTTTGAAAGGCTTTGCTGGTTTAAGCGGTGCAATCTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCGATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGCTTGATGTTTTTTATCAAACCTGTTGCCGGCCATAGGCAAGTGCGGCGGTCTGACGCCATGAGCTTTACTACTGTTTATGGCGTCTGCCTCCTCTTGGCTGCATATTTGATGGGTGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCTCCACTGTGATAGCCATTTTTACTGCTGTTATGTTTGTCATCCTTCTTATTCCCTTTTTGATTCCGGTGGCGTCGACTTTGAGCTCAGAGACGACAACATATGCTGAGCAAGAGGCTCTCCTACAACCGTTACACAGACAGGAACCTGCTACATCTGAAGCAGATGGTAATGAAGTGATATTAAGTGAGGTGGAAGATGAAAAATCAGAAGTAGAGGACTCAGTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAGTTGCAAGCAAAACTCTTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTGCAGAGGAGGAAGGGTCCACGTAGAGGGGAAGATTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTCTCTCCCATCTCCTTGGTTCTGGGACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCGAACCTATTGCAATGGCGATTGCGCAACTCCTTATGATATTTGGACATCTCTTCATCGGAATGGGATGGCCTGGAGCAATGTACATTGGAACTCTCATAACAGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGGTTGAAAAAGTTTGCTGCTTTATACAACTTCATCACTCTCTCTACTCCCATGGGATCTTTGATATTTTCTGGGTTAATCACGAGCAGTATCTATGATAAGGAAGCAGAGAAGCAAGCTCTCAATCATCTCTCACAGCTGCAGAGCTCCAATGGACCGCTCAAGTGCGTGGGCACCATATGTTTCTCTCTAACTTGTATGATAATGGCTGTTTTCTGCGCCATTGCAGGCATCTTAAGTTTGGTTTTGGTTCACCGGACCAGGGGTGTTTACTACAACCTCTATGGAAAATCTCGTTCGTCCTCGCTTTGTGTAAACTAG 1647 46.21 MGMCNEKLVGFLNNRWLVFVAAIWVQSCAGIGYLFGSISPVIKTNLSYSQRQIARLGVAKDLGDSVGTLAGTLLEILPFWATLLVGAISNFVGYGWIWLIVTGRAPVLPLWAMCILVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSADLIFMIAVGPALVAIGLMFFIKPVAGHRQVRRSDAMSFTTVYGVCLLLAAYLMGVMLVEDLVTLSSTVIAIFTAVMFVILLIPFLIPVASTLSSETTTYAEQEALLQPLHRQEPATSEADGNEVILSEVEDEKSEVEDSVPASERQKRIAQLQAKLLQAAAEGAVRVQRRKGPRRGEDFTLGQALIKADFWLIFLSHLLGSGTGLTVIDNLGQMSEPIAMAIAQLLMIFGHLFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFAALYNFITLSTPMGSLIFSGLITSSIYDKEAEKQALNHLSQLQSSNGPLKCVGTICFSLTCMIMAVFCAIAGILSLVLVHRTRGVYYNLYGKSRSSSLCVN 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8999898 9002529 - Cp4.1LG13g11240.1 Cpe13g01125 480323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g01125 548 Pfam Nodulin-like 15 262 IPR010658 -
Cpe13g01125 548 SUPERFAMILY MFS general substrate transporter 11 202 IPR036259 -
Cpe13g01125 548 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 390 - -
Cpe13g01125 548 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 390 - -
Cpe13g01125 548 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 392 541 - -
Cpe13g01125 548 Gene3D MFS general substrate transporter like domains 354 534 IPR036259 -
Cpe13g01125 548 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 392 541 - -
Cpe13g01125 548 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cpe13g01125 548 Coils Coil 300 336 - -
Cpe13g01125 548 SUPERFAMILY MFS general substrate transporter 212 531 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01382 Cpe-Chr5:9733765 Cpe13g01125 Cpe-Chr13:8999898 2.55E-95 dispersed
Cpe13g00763 Cpe-Chr13:6971575 Cpe13g01125 Cpe-Chr13:8999898 9.74E-19 dispersed
Cpe13g01125 Cpe-Chr13:8999898 Cpe16g00309 Cpe-Chr16:4977055 3.13E-93 dispersed
Cpe01g02580 Cpe-Chr1:20962088 Cpe13g01125 Cpe-Chr13:8999898 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g01125 - - csv:101211655 888.256