Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g01152 ATGGATGGTTTGGTCATCGAGATCAACCTCGGGACTGTAGATTCATGGCGGACCGCCGGAAATGGCGACGTCGCCGGAAAGACAAGCGCCGCATCGTTTTCACTCCTTGTTTCATCATCTGCTCACTATTTCAGACCTTCCTCTGCTCATTTTCAACTGTTCTTACGCTTACACTCAGTCCATTTTACTCTTATGATTGGTCAGCAGAGTATGAGCTCTTCATCAGCTCAGCTCTATGCATCAAGGATGGGCATCTATGAGCCATTTCACCAGATCAACTCATGGGGTAATGCCTTCGGTACTCGACTCGATACCAGCATATCGCCTATTATAAAAGTGGACGACTGTGTAGACAATAAACCTGAGTTCGTTCCTTTCGAATCGATGGATCATCACGAGAGCAGTCAAGAAACGAACAAGCCAATCGATGATAAGGTACAACGACGTTTAACACAAAATCGAGAAGCAGCTCGTAAAAGCCGTATGAGGAAAAAGGTTTATGTACAGCAGTTAGAAACTAGCCCGAGCTGCTTAGCAGATACCAGCCACTTGGGATTCAGCAGATTGGTAAACCCAGGGATTGCTGCATTTGAGTTAGAATACAATCACTGGGTTGAAAAGCAAGAGAGACAGATCACTGAACTCAGAAAGGCATTGCAGCAAGTTCATATAATAACTGATACAGAACTCAAAATTTTAGTGGAAAGCAGCTTAAACCATTACCATAATCTGTTTTGCATGAAAGCCAATGCTGCAAAGGCTGATGTTTTCTATTTAATGTCTGGTGTATGGAGATCATCAGCAGAGCGTTTTTTCCTGTGGATTGGAGGATTTCGGCCATCGGAGCTGCTAAACGTGCTGACGCCATACTTTGAGGCATTAAATGAACAACAACAGAGCGCTATCCACAATTTGCAGCAGTCGTCTCGGCAAGCTGAAGACGCGCTCTCACAGGGAATGGAAAAACTGCACCAGAATCTATCCCTCAGCATTGCCAGCGATCCTATAGGAAGCTATATTTCTGAGATGGGTGATGGAATGGAGAAAGCAGAAGCATTGGAGAGCTTGGTAAGGCAGGCAGACCATCTGAGGCAACAAACTTTGAAGAGAATGTCCCACATCCTAAGTACCAAACAAGCGGCGCAAGGGTTGGTCGCTTTAGGCGAGTACTTCCACCGTCTCCGTATTCTGAGCTCCCTCTGGGCCACTCGACCTCGTGAACCTGCGTAG 1230 46.1 MDGLVIEINLGTVDSWRTAGNGDVAGKTSAASFSLLVSSSAHYFRPSSAHFQLFLRLHSVHFTLMIGQQSMSSSSAQLYASRMGIYEPFHQINSWGNAFGTRLDTSISPIIKVDDCVDNKPEFVPFESMDHHESSQETNKPIDDKVQRRLTQNREAARKSRMRKKVYVQQLETSPSCLADTSHLGFSRLVNPGIAAFELEYNHWVEKQERQITELRKALQQVHIITDTELKILVESSLNHYHNLFCMKANAAKADVFYLMSGVWRSSAERFFLWIGGFRPSELLNVLTPYFEALNEQQQSAIHNLQQSSRQAEDALSQGMEKLHQNLSLSIASDPIGSYISEMGDGMEKAEALESLVRQADHLRQQTLKRMSHILSTKQAAQGLVALGEYFHRLRILSSLWATRPREPA 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9134720 9138022 + Cp4.1LG13g11550.1 Cpe13g01152 480350

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g01152 409 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 148 163 IPR004827 GO:0003700|GO:0006355
Cpe13g01152 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 143 172 IPR004827 GO:0003700|GO:0006355
Cpe13g01152 409 Coils Coil 295 315 - -
Cpe13g01152 409 ProSiteProfiles DOG1 domain profile. 194 404 IPR025422 GO:0006351|GO:0043565
Cpe13g01152 409 Pfam bZIP transcription factor 144 173 IPR004827 GO:0003700|GO:0006355
Cpe13g01152 409 SMART brlzneu 141 221 IPR004827 GO:0003700|GO:0006355
Cpe13g01152 409 Pfam Seed dormancy control 211 288 IPR025422 GO:0006351|GO:0043565
Cpe13g01152 409 Coils Coil 205 225 - -
Cpe13g01152 409 PANTHER TRANSCRIPTION FACTOR TGA7 71 408 - -
Cpe13g01152 409 Gene3D - 144 226 - -
Cpe13g01152 409 PANTHER TRANSCRIPTION FACTOR TGA9 71 408 - -
Cpe13g01152 409 SUPERFAMILY Leucine zipper domain 145 178 IPR046347 GO:0003700|GO:0006355
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g01152 K14431 TGA; transcription factor TGA - csv:101217648 569.696
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g01152 Cpe-Chr13:9134720 Cpe14g00573 Cpe-Chr14:3635226 1.06E-109 dispersed
Cpe20g00466 Cpe-Chr20:2700081 Cpe13g01152 Cpe-Chr13:9134720 2.95E-08 dispersed
Cpe01g02608 Cpe-Chr1:21130185 Cpe13g01152 Cpe-Chr13:9134720 4.06E-171 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cpe14g00573 . 90 435 Calmodulin-binding Proteins AT1G22070 53.7 9.9e-92 334.3
Cpe13g01152 . 70 407 Calmodulin-binding Proteins AT1G22070 51.8 3.1e-85 312.8
Cpe07g00106 . 35 333 Calmodulin-binding Proteins AT1G22070 58.1 1.2e-84 310.8
Cpe03g00448 . 164 468 Calmodulin-binding Proteins AT1G22070 57.4 6.4e-83 305.1
Cpe08g01342 CCT 154 458 Calmodulin-binding Proteins AT1G22070 57.1 1.4e-82 303.9
Cpe01g01797 . 177 459 Calmodulin-binding Proteins AT1G22070 57.3 6.2e-78 288.5
Cpe09g00623 CST 150 459 Calmodulin-binding Proteins AT1G22070 50.6 9.9e-76 281.2
Cpe01g02608 . 46 356 Calmodulin-binding Proteins AT1G22070 50.6 4.9e-75 278.9
Cpe13g00411 . 167 429 Calmodulin-binding Proteins AT1G22070 51.7 7.6e-68 255.0
Cpe03g00385 CCT 182 458 Calmodulin-binding Proteins AT1G22070 51.2 4.9e-67 252.3
Cpe14g00573 . 87 435 Calmodulin-binding Proteins AT5G65210 64.8 2.9e-125 445.7
Cpe01g00721 . 1 300 Calmodulin-binding Proteins AT5G65210 59.0 1.5e-97 353.6
Cpe13g01152 . 72 408 Calmodulin-binding Proteins AT5G65210 51.8 1.1e-87 320.9
Cpe07g00106 . 41 333 Calmodulin-binding Proteins AT5G65210 56.7 5.6e-84 308.5
Cpe03g00448 . 132 468 Calmodulin-binding Proteins AT5G65210 50.7 5.2e-82 302.0
Cpe01g02608 . 47 371 Calmodulin-binding Proteins AT5G65210 50.4 2.6e-81 299.7
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT5G65210 55.7 1.3e-80 297.4
Cpe09g00623 CST 188 458 Calmodulin-binding Proteins AT5G65210 52.3 1.6e-75 280.4
Cpe14g00573 . 77 435 Calmodulin-binding Proteins AT1G77920 53.7 5.9e-94 341.7
Cpe13g01152 . 72 408 Calmodulin-binding Proteins AT1G77920 54.0 1.8e-90 330.1
Cpe07g00106 . 48 333 Calmodulin-binding Proteins AT1G77920 58.7 5.7e-81 298.5
Cpe01g02608 . 48 356 Calmodulin-binding Proteins AT1G77920 53.8 1.4e-79 293.9
Cpe03g00448 . 132 468 Calmodulin-binding Proteins AT1G77920 50.7 1.8e-79 293.5
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT1G77920 57.3 2.0e-78 290.0
Cpe01g01797 . 174 459 Calmodulin-binding Proteins AT1G77920 55.6 6.6e-77 285.0
Cpe09g00623 CST 162 458 Calmodulin-binding Proteins AT1G77920 53.2 2.1e-75 280.0
Cpe03g00385 CCT 196 458 Calmodulin-binding Proteins AT1G77920 51.3 4.7e-67 252.3
Cpe14g00573 . 87 435 Calmodulin-binding Proteins AT5G10030 65.0 2.5e-121 432.6
Cpe01g00721 . 3 300 Calmodulin-binding Proteins AT5G10030 61.0 6.7e-98 354.8
Cpe07g00106 . 48 333 Calmodulin-binding Proteins AT5G10030 59.5 9.1e-87 317.8
Cpe01g01797 . 123 459 Calmodulin-binding Proteins AT5G10030 52.5 2.0e-86 316.6
Cpe03g00448 . 175 468 Calmodulin-binding Proteins AT5G10030 58.7 1.7e-85 313.5
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT5G10030 58.6 1.4e-84 310.5
Cpe13g01152 . 82 408 Calmodulin-binding Proteins AT5G10030 52.1 7.2e-84 308.1
Cpe01g02608 . 61 371 Calmodulin-binding Proteins AT5G10030 52.2 1.3e-77 287.3
Cpe09g00623 CST 188 458 Calmodulin-binding Proteins AT5G10030 51.9 3.6e-75 279.3
Cpe09g00455 CCT 47 299 Calmodulin-binding Proteins AT5G10030 50.2 4.8e-56 215.7
Cpe14g00573 . 90 435 Calmodulin-binding Proteins AT1G22070 53.7 9.9e-92 334.3
Cpe13g01152 . 70 407 Calmodulin-binding Proteins AT1G22070 51.8 3.1e-85 312.8
Cpe07g00106 . 35 333 Calmodulin-binding Proteins AT1G22070 58.1 1.2e-84 310.8
Cpe03g00448 . 164 468 Calmodulin-binding Proteins AT1G22070 57.4 6.4e-83 305.1
Cpe08g01342 CCT 154 458 Calmodulin-binding Proteins AT1G22070 57.1 1.4e-82 303.9
Cpe01g01797 . 177 459 Calmodulin-binding Proteins AT1G22070 57.3 6.2e-78 288.5
Cpe09g00623 CST 150 459 Calmodulin-binding Proteins AT1G22070 50.6 9.9e-76 281.2
Cpe01g02608 . 46 356 Calmodulin-binding Proteins AT1G22070 50.6 4.9e-75 278.9
Cpe13g00411 . 167 429 Calmodulin-binding Proteins AT1G22070 51.7 7.6e-68 255.0
Cpe03g00385 CCT 182 458 Calmodulin-binding Proteins AT1G22070 51.2 4.9e-67 252.3
Cpe14g00573 . 87 435 Calmodulin-binding Proteins AT5G65210 64.8 2.9e-125 445.7
Cpe01g00721 . 1 300 Calmodulin-binding Proteins AT5G65210 59.0 1.5e-97 353.6
Cpe13g01152 . 72 408 Calmodulin-binding Proteins AT5G65210 51.8 1.1e-87 320.9
Cpe07g00106 . 41 333 Calmodulin-binding Proteins AT5G65210 56.7 5.6e-84 308.5
Cpe03g00448 . 132 468 Calmodulin-binding Proteins AT5G65210 50.7 5.2e-82 302.0
Cpe01g02608 . 47 371 Calmodulin-binding Proteins AT5G65210 50.4 2.6e-81 299.7
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT5G65210 55.7 1.3e-80 297.4
Cpe09g00623 CST 188 458 Calmodulin-binding Proteins AT5G65210 52.3 1.6e-75 280.4
Cpe14g00573 . 77 435 Calmodulin-binding Proteins AT1G77920 53.7 5.9e-94 341.7
Cpe13g01152 . 72 408 Calmodulin-binding Proteins AT1G77920 54.0 1.8e-90 330.1
Cpe07g00106 . 48 333 Calmodulin-binding Proteins AT1G77920 58.7 5.7e-81 298.5
Cpe01g02608 . 48 356 Calmodulin-binding Proteins AT1G77920 53.8 1.4e-79 293.9
Cpe03g00448 . 132 468 Calmodulin-binding Proteins AT1G77920 50.7 1.8e-79 293.5
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT1G77920 57.3 2.0e-78 290.0
Cpe01g01797 . 174 459 Calmodulin-binding Proteins AT1G77920 55.6 6.6e-77 285.0
Cpe09g00623 CST 162 458 Calmodulin-binding Proteins AT1G77920 53.2 2.1e-75 280.0
Cpe03g00385 CCT 196 458 Calmodulin-binding Proteins AT1G77920 51.3 4.7e-67 252.3
Cpe14g00573 . 87 435 Calmodulin-binding Proteins AT5G10030 65.0 2.5e-121 432.6
Cpe01g00721 . 3 300 Calmodulin-binding Proteins AT5G10030 61.0 6.7e-98 354.8
Cpe07g00106 . 48 333 Calmodulin-binding Proteins AT5G10030 59.5 9.1e-87 317.8
Cpe01g01797 . 123 459 Calmodulin-binding Proteins AT5G10030 52.5 2.0e-86 316.6
Cpe03g00448 . 175 468 Calmodulin-binding Proteins AT5G10030 58.7 1.7e-85 313.5
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT5G10030 58.6 1.4e-84 310.5
Cpe13g01152 . 82 408 Calmodulin-binding Proteins AT5G10030 52.1 7.2e-84 308.1
Cpe01g02608 . 61 371 Calmodulin-binding Proteins AT5G10030 52.2 1.3e-77 287.3
Cpe09g00623 CST 188 458 Calmodulin-binding Proteins AT5G10030 51.9 3.6e-75 279.3
Cpe09g00455 CCT 47 299 Calmodulin-binding Proteins AT5G10030 50.2 4.8e-56 215.7
Cpe19g00524 . 1 142 Calmodulin-binding Proteins AT5G64040 65.3 6.8e-43 171.0
Cpe10g00333 . 1 142 Calmodulin-binding Proteins AT5G64040 61.8 3.2e-40 162.2
Cpe08g01274 . 36 1096 Calmodulin-binding Proteins AT5G65930 61.4 0.0e+00 1348.2
Cpe15g00371 . 1 1009 Calmodulin-binding Proteins AT3G56690 53.4 2.9e-268 922.2
Cpe18g00294 . 1 255 Calmodulin-binding Proteins AT5G20720 72.4 7.4e-96 347.4
Cpe19g00109 . 1 233 Calmodulin-binding Proteins AT5G20720 63.4 5.9e-77 284.6
Cpe02g01316 . 1 231 Calmodulin-binding Proteins AT1G08110 71.9 1.1e-93 340.1
Cpe19g00187 . 373 875 Calmodulin-binding Proteins AT3G04080 52.6 7.7e-139 491.1
Cpe10g01036 . 279 694 Calmodulin-binding Proteins AT3G04080 55.9 7.5e-134 474.6
Cpe03g00195 . 84 925 Calmodulin-binding Proteins AT2G36910 69.0 0.0e+00 1355.1
Cpe08g01084 . 84 819 Calmodulin-binding Proteins AT2G36910 69.1 0.0e+00 1153.7
Cpe13g00944 . 13 1016 Calmodulin-binding Proteins AT2G36910 51.2 1.4e-288 989.9
Cpe05g00691 . 468 710 Calmodulin-binding Proteins AT2G36910 53.1 2.2e-66 251.9
Cpe14g01070 . 55 356 Calmodulin-binding Proteins AT5G63870 70.7 6.7e-128 454.1
Cpe01g02288 . 294 576 Calmodulin-binding Proteins AT5G63870 52.7 1.7e-86 316.6
Cpe01g01672 . 1 167 Calmodulin-binding Proteins AT3G43120 60.7 5.1e-50 194.5
Cpe01g01672 . 1 156 Calmodulin-binding Proteins AT5G20810 64.1 2.7e-50 195.7
Cpe06g00409 . 5 167 Calmodulin-binding Proteins AT2G24400 52.5 1.7e-38 156.4
Cpe02g00389 . 1 164 Calmodulin-binding Proteins AT2G24400 52.5 1.1e-37 153.7
Cpe02g00081 . 5 149 Calmodulin-binding Proteins AT4G34750 55.6 3.2e-38 155.2
Cpe18g00610 CST 10 634 Calmodulin-binding Proteins AT5G57580 67.3 1.3e-240 829.7
Cpe04g01294 CST 12 636 Calmodulin-binding Proteins AT5G57580 66.7 2.2e-237 818.9
Cpe04g01294 CST 4 636 Calmodulin-binding Proteins AT2G18750 64.3 2.4e-220 762.3
Cpe18g00610 CST 1 634 Calmodulin-binding Proteins AT2G18750 61.8 3.9e-215 745.0
Cpe18g00610 CST 15 633 Calmodulin-binding Proteins AT4G25800 65.8 8.7e-220 760.4
Cpe04g01294 CST 17 635 Calmodulin-binding Proteins AT4G25800 65.4 9.6e-219 756.9
Cpe18g00610 CST 23 632 Calmodulin-binding Proteins AT2G24300 53.9 3.4e-171 599.0
Cpe04g01294 CST 17 634 Calmodulin-binding Proteins AT2G24300 54.4 2.8e-165 579.3
Cpe03g01269 . 14 290 Calmodulin-binding Proteins AT3G59220 67.4 3.3e-108 388.7
Cpe08g00104 . 5 253 Calmodulin-binding Proteins AT3G59220 70.1 2.3e-101 365.9
Cpe02g00802 CCT,CST 13 289 Calmodulin-binding Proteins AT3G59220 58.1 3.5e-94 342.0
Cpe06g00791 CCT,CST 1 214 Calmodulin-binding Proteins AT3G59220 58.8 1.0e-72 270.8
Cpe14g00761 CCT 1 203 Calmodulin-binding Proteins AT3G59220 57.1 2.1e-70 263.1
Cpe08g00104 . 4 258 Calmodulin-binding Proteins AT3G59260 67.7 3.5e-99 358.6
Cpe03g01269 . 40 295 Calmodulin-binding Proteins AT3G59260 64.7 1.4e-95 346.7
Cpe02g00802 CCT,CST 31 294 Calmodulin-binding Proteins AT3G59260 58.3 1.9e-89 326.2
Cpe06g00791 CCT,CST 1 219 Calmodulin-binding Proteins AT3G59260 59.7 2.3e-74 276.2
Cpe14g00761 CCT 1 208 Calmodulin-binding Proteins AT3G59260 54.8 1.3e-66 250.4
Cpe06g00791 CCT,CST 1 226 Calmodulin-binding Proteins AT1G50590 64.7 3.6e-84 308.5
Cpe02g00802 CCT,CST 76 296 Calmodulin-binding Proteins AT1G50590 64.3 7.4e-82 300.8
Cpe14g00761 CCT 1 209 Calmodulin-binding Proteins AT1G50590 65.0 5.7e-74 274.6
Cpe08g00104 . 40 258 Calmodulin-binding Proteins AT1G50590 58.8 2.0e-71 266.2
Cpe03g01269 . 77 295 Calmodulin-binding Proteins AT1G50590 57.0 1.0e-70 263.8
Cpe13g00915 . 1 183 Calmodulin-binding Proteins AT5G40190 71.0 5.2e-75 277.7
Cpe13g00915 . 1 152 Calmodulin-binding Proteins AT3G28140 66.0 2.6e-52 202.2
Cpe06g00565 . 14 719 Calmodulin-binding Proteins AT2G43040 71.0 1.4e-288 989.2
Cpe02g00607 . 19 642 Calmodulin-binding Proteins AT2G43040 64.5 1.8e-245 845.9
Cpe11g00118 . 70 785 Calmodulin-binding Proteins AT1G27460 58.8 4.6e-233 804.7
Cpe05g00076 CCT,ECH 28 744 Calmodulin-binding Proteins AT4G28600 58.3 8.0e-223 770.8
Cpe15g00093 CCT,ECH 18 730 Calmodulin-binding Proteins AT4G28600 58.1 8.0e-223 770.8
Cpe08g00348 CST 24 732 Calmodulin-binding Proteins AT4G28600 51.4 1.4e-195 680.2
Cpe13g00539 . 1 487 Calmodulin-binding Proteins AT5G17330 85.5 1.8e-255 878.6
Cpe01g01871 . 1 485 Calmodulin-binding Proteins AT5G17330 80.8 9.5e-236 813.1
Cpe01g01872 CCT 1 485 Calmodulin-binding Proteins AT5G17330 80.6 1.0e-234 809.7
Cpe01g01974 . 1 460 Calmodulin-binding Proteins AT5G17330 81.1 8.3e-232 800.0
Cpe13g00440 CCT 1 477 Calmodulin-binding Proteins AT5G17330 70.3 2.5e-204 708.8
Cpe02g01093 . 1 449 Calmodulin-binding Proteins AT5G17330 68.7 5.6e-196 681.0
Cpe13g00539 . 131 487 Calmodulin-binding Proteins AT1G65960 82.5 5.5e-177 617.5
Cpe01g01871 . 131 485 Calmodulin-binding Proteins AT1G65960 81.3 4.7e-168 587.8
Cpe01g01872 CCT 131 485 Calmodulin-binding Proteins AT1G65960 80.5 3.4e-166 581.6
Cpe02g01093 . 96 449 Calmodulin-binding Proteins AT1G65960 75.8 3.2e-156 548.5
Cpe01g01974 . 131 460 Calmodulin-binding Proteins AT1G65960 74.8 4.7e-152 534.6
Cpe13g00440 CCT 132 479 Calmodulin-binding Proteins AT1G65960 68.3 5.2e-143 504.6
Cpe13g00539 . 1 487 Calmodulin-binding Proteins AT2G02010 83.4 7.1e-245 843.6
Cpe01g01871 . 1 485 Calmodulin-binding Proteins AT2G02010 82.7 2.4e-240 828.6
Cpe01g01872 CCT 1 485 Calmodulin-binding Proteins AT2G02010 82.9 9.0e-240 826.6
Cpe01g01974 . 1 457 Calmodulin-binding Proteins AT2G02010 78.5 2.1e-220 762.3
Cpe13g00440 CCT 1 481 Calmodulin-binding Proteins AT2G02010 70.6 8.8e-203 703.7
Cpe02g01093 . 1 446 Calmodulin-binding Proteins AT2G02010 68.9 2.1e-196 682.6
Cpe13g00539 . 1 487 Calmodulin-binding Proteins AT3G17760 74.7 3.8e-221 764.6
Cpe01g01871 . 1 485 Calmodulin-binding Proteins AT3G17760 74.9 6.5e-221 763.8
Cpe01g01872 CCT 6 480 Calmodulin-binding Proteins AT3G17760 75.7 5.5e-220 760.8
Cpe01g01974 . 1 460 Calmodulin-binding Proteins AT3G17760 71.1 6.3e-200 694.1
Cpe02g01093 . 1 449 Calmodulin-binding Proteins AT3G17760 69.9 2.6e-198 688.7
Cpe13g00440 CCT 8 480 Calmodulin-binding Proteins AT3G17760 67.3 1.4e-194 676.4
Cpe13g00539 . 1 486 Calmodulin-binding Proteins AT2G02000 81.7 5.7e-241 830.5
Cpe01g01871 . 1 487 Calmodulin-binding Proteins AT2G02000 80.3 5.7e-233 803.9
Cpe01g01872 CCT 1 480 Calmodulin-binding Proteins AT2G02000 81.5 1.7e-232 802.4
Cpe01g01974 . 1 459 Calmodulin-binding Proteins AT2G02000 77.0 1.0e-218 756.5
Cpe13g00440 CCT 1 476 Calmodulin-binding Proteins AT2G02000 69.0 2.3e-197 685.6
Cpe02g01093 . 1 444 Calmodulin-binding Proteins AT2G02000 67.1 7.8e-190 660.6
Cpe02g00229 CCT,ECH 726 895 Calmodulin-binding Proteins AT2G22960 55.9 1.6e-52 203.0
Cpe06g00210 CCT,ECH 707 882 Calmodulin-binding Proteins AT2G22960 50.6 7.9e-47 184.1
Cpe12g01106 . 148 694 Calmodulin-binding Proteins AT3G25230 77.4 1.1e-243 839.7
Cpe17g01127 . 1 520 Calmodulin-binding Proteins AT3G25230 78.4 3.2e-232 801.6
Cpe03g01284 . 1 549 Calmodulin-binding Proteins AT3G25230 70.1 7.4e-221 763.8
Cpe12g01106 . 162 693 Calmodulin-binding Proteins AT5G48570 76.1 1.1e-235 813.1
Cpe03g01284 . 1 575 Calmodulin-binding Proteins AT5G48570 69.9 1.6e-231 799.3
Cpe17g01127 . 16 520 Calmodulin-binding Proteins AT5G48570 76.6 8.1e-223 770.4
Cpe14g00573 . 90 435 Calmodulin-binding Proteins AT1G22070 53.7 9.9e-92 334.3
Cpe13g01152 . 70 407 Calmodulin-binding Proteins AT1G22070 51.8 3.1e-85 312.8
Cpe07g00106 . 35 333 Calmodulin-binding Proteins AT1G22070 58.1 1.2e-84 310.8
Cpe03g00448 . 164 468 Calmodulin-binding Proteins AT1G22070 57.4 6.4e-83 305.1
Cpe08g01342 CCT 154 458 Calmodulin-binding Proteins AT1G22070 57.1 1.4e-82 303.9
Cpe01g01797 . 177 459 Calmodulin-binding Proteins AT1G22070 57.3 6.2e-78 288.5
Cpe09g00623 CST 150 459 Calmodulin-binding Proteins AT1G22070 50.6 9.9e-76 281.2
Cpe01g02608 . 46 356 Calmodulin-binding Proteins AT1G22070 50.6 4.9e-75 278.9
Cpe13g00411 . 167 429 Calmodulin-binding Proteins AT1G22070 51.7 7.6e-68 255.0
Cpe03g00385 CCT 182 458 Calmodulin-binding Proteins AT1G22070 51.2 4.9e-67 252.3
Cpe14g00573 . 77 435 Calmodulin-binding Proteins AT1G77920 53.7 5.9e-94 341.7
Cpe13g01152 . 72 408 Calmodulin-binding Proteins AT1G77920 54.0 1.8e-90 330.1
Cpe07g00106 . 48 333 Calmodulin-binding Proteins AT1G77920 58.7 5.7e-81 298.5
Cpe01g02608 . 48 356 Calmodulin-binding Proteins AT1G77920 53.8 1.4e-79 293.9
Cpe03g00448 . 132 468 Calmodulin-binding Proteins AT1G77920 50.7 1.8e-79 293.5
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT1G77920 57.3 2.0e-78 290.0
Cpe01g01797 . 174 459 Calmodulin-binding Proteins AT1G77920 55.6 6.6e-77 285.0
Cpe09g00623 CST 162 458 Calmodulin-binding Proteins AT1G77920 53.2 2.1e-75 280.0
Cpe03g00385 CCT 196 458 Calmodulin-binding Proteins AT1G77920 51.3 4.7e-67 252.3
Cpe14g00573 . 87 435 Calmodulin-binding Proteins AT5G10030 65.0 2.5e-121 432.6
Cpe01g00721 . 3 300 Calmodulin-binding Proteins AT5G10030 61.0 6.7e-98 354.8
Cpe07g00106 . 48 333 Calmodulin-binding Proteins AT5G10030 59.5 9.1e-87 317.8
Cpe01g01797 . 123 459 Calmodulin-binding Proteins AT5G10030 52.5 2.0e-86 316.6
Cpe03g00448 . 175 468 Calmodulin-binding Proteins AT5G10030 58.7 1.7e-85 313.5
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT5G10030 58.6 1.4e-84 310.5
Cpe13g01152 . 82 408 Calmodulin-binding Proteins AT5G10030 52.1 7.2e-84 308.1
Cpe01g02608 . 61 371 Calmodulin-binding Proteins AT5G10030 52.2 1.3e-77 287.3
Cpe09g00623 CST 188 458 Calmodulin-binding Proteins AT5G10030 51.9 3.6e-75 279.3
Cpe09g00455 CCT 47 299 Calmodulin-binding Proteins AT5G10030 50.2 4.8e-56 215.7
Cpe14g00573 . 87 435 Calmodulin-binding Proteins AT5G65210 64.8 2.9e-125 445.7
Cpe01g00721 . 1 300 Calmodulin-binding Proteins AT5G65210 59.0 1.5e-97 353.6
Cpe13g01152 . 72 408 Calmodulin-binding Proteins AT5G65210 51.8 1.1e-87 320.9
Cpe07g00106 . 41 333 Calmodulin-binding Proteins AT5G65210 56.7 5.6e-84 308.5
Cpe03g00448 . 132 468 Calmodulin-binding Proteins AT5G65210 50.7 5.2e-82 302.0
Cpe01g02608 . 47 371 Calmodulin-binding Proteins AT5G65210 50.4 2.6e-81 299.7
Cpe08g01342 CCT 173 458 Calmodulin-binding Proteins AT5G65210 55.7 1.3e-80 297.4
Cpe09g00623 CST 188 458 Calmodulin-binding Proteins AT5G65210 52.3 1.6e-75 280.4
Cpe18g00576 . 8 655 Calmodulin-binding Proteins AT3G12580 85.9 0.0e+00 1088.9
Cpe01g02287 . 2 495 Calmodulin-binding Proteins AT3G12580 91.7 2.0e-254 875.5
Cpe10g00880 . 2 490 Calmodulin-binding Proteins AT3G12580 92.1 3.4e-254 874.8
Cpe01g02292 . 1 475 Calmodulin-binding Proteins AT3G12580 93.7 5.5e-252 867.5
Cpe13g00849 . 1 476 Calmodulin-binding Proteins AT3G12580 92.3 4.8e-248 854.4
Cpe19g00364 . 1 477 Calmodulin-binding Proteins AT3G12580 91.4 2.2e-245 845.5
Cpe05g00794 . 30 654 Calmodulin-binding Proteins AT3G12580 65.3 6.3e-232 800.8
Cpe13g00106 . 36 661 Calmodulin-binding Proteins AT3G12580 64.8 1.5e-230 796.2
Cpe13g00846 . 2 413 Calmodulin-binding Proteins AT3G12580 73.0 2.5e-188 656.0
Cpe14g00238 . 60 656 Calmodulin-binding Proteins AT3G12580 50.1 4.0e-154 542.3
Cpe06g00906 . 46 588 Calmodulin-binding Proteins AT3G12580 50.4 8.7e-141 498.0
Cpe18g00576 . 8 655 Calmodulin-binding Proteins AT5G02500 66.0 1.2e-225 779.6
Cpe13g00846 . 2 413 Calmodulin-binding Proteins AT5G02500 74.3 3.8e-163 572.0
Cpe10g00880 . 2 490 Calmodulin-binding Proteins AT5G02500 66.5 6.5e-163 571.2
Cpe01g02287 . 2 495 Calmodulin-binding Proteins AT5G02500 65.2 3.6e-161 565.5
Cpe05g00794 . 30 656 Calmodulin-binding Proteins AT5G02500 50.8 7.9e-161 564.3
Cpe13g00106 . 36 661 Calmodulin-binding Proteins AT5G02500 50.2 1.3e-158 557.0
Cpe01g02292 . 1 475 Calmodulin-binding Proteins AT5G02500 65.8 1.8e-157 553.1
Cpe13g00849 . 1 476 Calmodulin-binding Proteins AT5G02500 65.1 4.5e-156 548.5
Cpe19g00364 . 1 477 Calmodulin-binding Proteins AT5G02500 65.7 4.7e-153 538.5
Cpe14g00238 . 60 437 Calmodulin-binding Proteins AT5G02500 51.5 1.7e-99 360.5
Cpe01g00373 . 60 437 Calmodulin-binding Proteins AT5G02500 51.5 2.3e-99 360.1
Cpe18g00576 . 8 655 Calmodulin-binding Proteins AT3G09440 83.3 7.5e-310 1059.7
Cpe10g00880 . 2 490 Calmodulin-binding Proteins AT3G09440 90.8 1.4e-247 852.8
Cpe01g02287 . 2 495 Calmodulin-binding Proteins AT3G09440 88.3 5.0e-245 844.3
Cpe01g02292 . 1 475 Calmodulin-binding Proteins AT3G09440 90.4 1.5e-241 832.8
Cpe13g00849 . 1 476 Calmodulin-binding Proteins AT3G09440 89.3 4.3e-241 831.2
Cpe19g00364 . 1 477 Calmodulin-binding Proteins AT3G09440 89.6 8.5e-237 817.0
Cpe05g00794 . 30 653 Calmodulin-binding Proteins AT3G09440 66.1 6.3e-232 800.8
Cpe13g00106 . 36 656 Calmodulin-binding Proteins AT3G09440 65.9 1.0e-229 793.5
Cpe13g00846 . 2 413 Calmodulin-binding Proteins AT3G09440 70.9 1.2e-182 637.1
Cpe14g00238 . 60 618 Calmodulin-binding Proteins AT3G09440 51.6 1.7e-152 537.0
Cpe18g00576 . 8 655 Calmodulin-binding Proteins AT5G02490 83.9 3.4e-310 1060.8
Cpe01g02287 . 2 495 Calmodulin-binding Proteins AT5G02490 88.7 7.0e-247 850.5
Cpe10g00880 . 2 490 Calmodulin-binding Proteins AT5G02490 88.9 1.5e-244 842.8
Cpe01g02292 . 1 475 Calmodulin-binding Proteins AT5G02490 89.0 3.0e-242 835.1
Cpe13g00849 . 1 476 Calmodulin-binding Proteins AT5G02490 89.0 2.2e-240 828.9
Cpe19g00364 . 1 477 Calmodulin-binding Proteins AT5G02490 88.2 2.7e-235 812.0
Cpe05g00794 . 30 654 Calmodulin-binding Proteins AT5G02490 64.8 9.1e-231 797.0
Cpe13g00106 . 36 661 Calmodulin-binding Proteins AT5G02490 63.9 8.5e-229 790.4
Cpe13g00846 . 2 413 Calmodulin-binding Proteins AT5G02490 69.8 1.6e-182 636.7
Cpe14g00238 . 60 654 Calmodulin-binding Proteins AT5G02490 50.2 1.4e-154 543.9
Cpe18g00576 . 8 655 Calmodulin-binding Proteins AT1G16030 84.0 0.0e+00 1085.9
Cpe01g02287 . 2 495 Calmodulin-binding Proteins AT1G16030 83.5 2.1e-232 802.4
Cpe05g00794 . 26 656 Calmodulin-binding Proteins AT1G16030 64.7 1.1e-231 800.0
Cpe13g00106 . 32 661 Calmodulin-binding Proteins AT1G16030 64.4 1.0e-229 793.5
Cpe01g02292 . 1 475 Calmodulin-binding Proteins AT1G16030 84.8 5.0e-229 791.2
Cpe10g00880 . 2 490 Calmodulin-binding Proteins AT1G16030 82.4 1.4e-228 789.6
Cpe13g00849 . 1 476 Calmodulin-binding Proteins AT1G16030 84.0 2.1e-227 785.8
Cpe19g00364 . 1 477 Calmodulin-binding Proteins AT1G16030 82.8 1.0e-221 766.9
Cpe13g00846 . 2 413 Calmodulin-binding Proteins AT1G16030 65.6 1.2e-169 594.0
Cpe14g00238 . 60 633 Calmodulin-binding Proteins AT1G16030 50.3 1.0e-149 527.7
Cpe18g00576 . 8 626 Calmodulin-binding Proteins AT1G56410 82.2 3.1e-289 991.1
Cpe01g02287 . 2 462 Calmodulin-binding Proteins AT1G56410 86.1 2.7e-224 775.4
Cpe05g00794 . 30 639 Calmodulin-binding Proteins AT1G56410 63.8 6.2e-221 764.2
Cpe10g00880 . 2 462 Calmodulin-binding Proteins AT1G56410 85.2 2.0e-219 759.2
Cpe13g00106 . 36 645 Calmodulin-binding Proteins AT1G56410 63.4 7.6e-219 757.3
Cpe01g02292 . 1 446 Calmodulin-binding Proteins AT1G56410 85.2 3.0e-215 745.3
Cpe13g00849 . 1 446 Calmodulin-binding Proteins AT1G56410 84.8 1.5e-214 743.0
Cpe19g00364 . 1 446 Calmodulin-binding Proteins AT1G56410 84.8 5.8e-211 731.1
Cpe13g00846 . 2 380 Calmodulin-binding Proteins AT1G56410 68.3 4.4e-166 582.0
Cpe14g00238 . 60 632 Calmodulin-binding Proteins AT1G56410 50.9 1.2e-152 537.3
Cpe01g00373 . 60 632 Calmodulin-binding Proteins AT1G56410 50.5 2.3e-151 533.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002529 2 5 1 3 2 1 2 1 1 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 0 1 13 7 1 60
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50467 PF14144 DOG1 4.00E-28 No_clan Cpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe13g01152 Cpe_Chr13 FPKM 1.755887 2.548869 24.071802 22.53635 3.556821 3.752862 4.219934 5.119323 4.963348 4.559018