Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00030 ATGGCTTTGCTGAGTCCTCGATTGCATAGATTCCGCCTAACCAAGCTCCACTATGCCTCCGCCTCCATACCCACAAAGACAAACCAGCTCACTCTCAGAAGAAAAAGCCGTTGCTGCTCCTCCATAGCTATCGATGCTCCATCTTCTTTAACAGATGCTGCGGGAATCAGATGGGGCTCGACGACTCTGCAAGGATTGCGCGAAGAAATGGAGGACGACGTTGTTGTGCGGTCTGATGGTCTTAGTGGCTTCTTGTTTGCTGCAGTGTTCGATGGCCATGGTGGCTATTCCTCCGTCAAGTTCCTCAGAGAGGAGCTGTACAAAGACTGCGTAGCAGCTTTACAAGGTGGCCTGCTGTTGAATGGAGGTGATTTTGAAGTGATAAAAGCAGCTTTGGCGAAGGCTTTTGATGAGACTGATAAAAAGTTACTCCTTTTGCTTGAAGCAGATGGGGAGGAAGATGAGTCTGGTTCCACGGCAACTGTTGCGTTCATACGAAACGATGTGTTGTTCGTTTCTCATGTTGGCGACTCTTGTGTTGTATTATCTCGTCCTGGAGGAGCACAGTTGTTGACTAGTTCTCATCGGCCTTATGGAAACAACACCACCTCACTGCAAGAAGTTAAAAGAATTAGAGAAGCAGGTGGATGGATTGTTAACGGAAGAATCTGTGGGGATATCTCTGTATCGCGTGCATTTGGCGACATACGGTTCAAGACGAAGAAATACGAGATGCTACAAAAAGGAGTTGAAGAAGGGAGATGGTCTGAAAAGTTTGTTTCTCGTGTACGTTTCAATGGAGACTTGGTTACTGCATCACCGGAAATTTTCCAAACTACACTCGGATCAAATGTCGAATTTATGCTGATAGCAACAGATGGCCTTTGGGATTACATGAATAGATCGGATGCGGTTAAGTTCGTTCGAAATGAACTTAGACAGCATGGTGATGTTCAGCTAGCTTGTGAAGCCCTCGCGCAAGCAGCCTTGGATAAAGGGTCACAAGACAATATTAGCATTATCATGGCTGATTTCGGGCGGACGGATTGGCAGAACTTTCAGATGAAGCAAGAGAACGTCATATTTGAAGTGGCTCAAGCTTTTGCTACCATCGGGGTCGTTTCTCTCGGTATTTGGTGGGCGTCCTCGACTTTCTCTCTTTAA 1164 46.48 MALLSPRLHRFRLTKLHYASASIPTKTNQLTLRRKSRCCSSIAIDAPSSLTDAAGIRWGSTTLQGLREEMEDDVVVRSDGLSGFLFAAVFDGHGGYSSVKFLREELYKDCVAALQGGLLLNGGDFEVIKAALAKAFDETDKKLLLLLEADGEEDESGSTATVAFIRNDVLFVSHVGDSCVVLSRPGGAQLLTSSHRPYGNNTTSLQEVKRIREAGGWIVNGRICGDISVSRAFGDIRFKTKKYEMLQKGVEEGRWSEKFVSRVRFNGDLVTASPEIFQTTLGSNVEFMLIATDGLWDYMNRSDAVKFVRNELRQHGDVQLACEALAQAALDKGSQDNISIIMADFGRTDWQNFQMKQENVIFEVAQAFATIGVVSLGIWWASSTFSL 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 165788 168827 - Cp4.1LG14g06750.1 Cpe14g00030 480414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00030 387 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Cpe14g00030 387 CDD PP2Cc 56 345 IPR001932 -
Cpe14g00030 387 PANTHER PROTEIN PHOSPHATASE 2C 57 6 382 - -
Cpe14g00030 387 PANTHER PROTEIN PHOSPHATASE 2C 6 382 IPR015655 GO:0004722|GO:0006470
Cpe14g00030 387 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Cpe14g00030 387 SUPERFAMILY PP2C-like 54 346 IPR036457 -
Cpe14g00030 387 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Cpe14g00030 387 Gene3D - 56 353 IPR036457 -
Cpe14g00030 387 SMART PP2C_4 47 343 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00038 Cpe14g00030 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00030 Cpe-Chr14:165788 Cpe02g00310 Cpe-Chr2:1640017 1.67E-32 dispersed
Cpe14g00030 Cpe-Chr14:165788 Cpe09g00023 Cpe-Chr9:134197 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00030 K04457 - csv:101218076 662.914