Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00042 ATGGGATACGGCAGGCTCAACGAAACCGACCCTGGCGGCACTTCCTCTGACGCACCTTCCCACCTCTCCCACCATGCCGCTTCTCCCAACCCACGGAGAAGGCGGCTTCTCCTTATCTCCCTCCTCTCTCTCATTCTCATCGTCACTGCCGCTGTCTCTGCCACGTTTCTCGTCGGCCTCCGAACCGCCTCCTCGGTCCGATCCGACCCCAATCTCCCTCGGAAACCGACTCAGGCCATTTCCAAGGCCTGCAGCCGAACTCGCTTCCCGACTCTCTGTGTCAACTCGCTCCTCGATTTCCCTGGATCTCTGAACGCCAATGAACAGGATCTCGTCCACATTTCCTTTAACATCACTCTCCAGCATCTCAACAAAGCCCTCTACTTCTCCTCTGAAATCTCCTCTCTGCAAATGGATCTTCGCGTACGCTCCGCCTACGATGCCTGTGTTGAACTCCTCGACGACTCTGTCGACGCCCTTACCCGCTCCTTGCAGTCCGTCGCGCCCTCTTCCTCTAACGGCGGCCCTCAACGCCTTGGCTCCTCCGATGACGTCATCACCTGGCTCAGCGCTGCCCTTACCAATCAAGACACATGTACGGACGGATTCTCCCAACTCTCCGGCTCTGTCAAAGACCAAATGGCCGATAAACTCCACAATTTGTCCGAACTCGTCAGCAATTGCTTGGCCCTGTTTTCCGGCAGTGTAACGAGCGATTTCTCCGGAGTGCCGATTCAGAACAAGCGCCGGTTGATGAACGCCGGCGACGACGAGGATACTTCCGGTAACTTCCCCGGCTGGATGAGTCGGAGAGAGAGGAGGTTACTGACGTTGCCGGTGGGGGCGTTACAGGCCGATATTGTGGTTTCTCAGAACGGAAGCGGAACGGTGAAGACGATCGCGGAAGCGATCAAAAAGGCGCCGCAGTACAGTAACAGAAGGACGATCATATACGTGATGGCAGGAAGGTACGAAGAGAAAAATCTGAAGGTGGGGAGGAAGAAATGGAACCTGATGTTTGTTGGGGATGGCAAGGGTAAAACTGTCATTTCCGGTGGTAAGAGCATCTTTGACAACGTCACAACCTTTCACACGGCGTCGTTTGCGGCCACAGGCGCTGGTATAATCTTAAGGGACATGACATTTGAGAATTGGGCGGGGCCTGGCCGGCACCAGGCAGTTGCACTTCGAGTTGGTGGCGACCACGCCGTGGTGTACCGCTGTAACATAATTGGCTATCAAGACACTCTCTACGTCCATTCCAACCGTCAGTTCTACCGGGAGTGCGACATTTATGGGACGGTGGATTTCATCTTCGGGAATGCGGCGGTGGTGTTTCAGAACTGCAGCATCTACGCCCGAAAGGCAATGGACCTTCAAAAGAACACAATCACGGCCCAAAACCGGAAGGATCCCAATCAGAACACTGGAATTTCCATCCATGCGTGTCGGATTTTGGCCGCCTCCGATCTGGCGTCGTCCAATAGCAGCAACCCGACCTATTTGGGGCGTCCCTGGAAATTATACTCCAGAGTCGTGTTCATGCTATCGTACATAGGGAGCCACGTGCACCCACGCGGTTGGCTGGAGTGGAATGCCACGTTTGCGCTGGACACGCTGTATTATGGGGAGTATATGAATTACGGACCGGGTGGGGCGGTGGGCCAAAGGGTGACATGGCCTGGGTATCGGGTCATAACTTCCACGGTGGAGGCGAGTAAGTTCACGGTGGCGCAGTTCATTTACGGCTCGTCGTGGTTGCCGTCCACGGGAGTTGCATTCCTGGGAGGGTTAAATGTGTAA 1803 55.24 MGYGRLNETDPGGTSSDAPSHLSHHAASPNPRRRRLLLISLLSLILIVTAAVSATFLVGLRTASSVRSDPNLPRKPTQAISKACSRTRFPTLCVNSLLDFPGSLNANEQDLVHISFNITLQHLNKALYFSSEISSLQMDLRVRSAYDACVELLDDSVDALTRSLQSVAPSSSNGGPQRLGSSDDVITWLSAALTNQDTCTDGFSQLSGSVKDQMADKLHNLSELVSNCLALFSGSVTSDFSGVPIQNKRRLMNAGDDEDTSGNFPGWMSRRERRLLTLPVGALQADIVVSQNGSGTVKTIAEAIKKAPQYSNRRTIIYVMAGRYEEKNLKVGRKKWNLMFVGDGKGKTVISGGKSIFDNVTTFHTASFAATGAGIILRDMTFENWAGPGRHQAVALRVGGDHAVVYRCNIIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSIYARKAMDLQKNTITAQNRKDPNQNTGISIHACRILAASDLASSNSSNPTYLGRPWKLYSRVVFMLSYIGSHVHPRGWLEWNATFALDTLYYGEYMNYGPGGAVGQRVTWPGYRVITSTVEASKFTVAQFIYGSSWLPSTGVAFLGGLNV 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 223595 226955 - Cp4.1LG14g06720.1 Cpe14g00042 480426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00042 600 CDD PMEI-like_3 83 233 - -
Cpe14g00042 600 Pfam Pectinesterase 286 583 IPR000070 GO:0030599|GO:0042545
Cpe14g00042 600 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 234 IPR035513 -
Cpe14g00042 600 SMART PMEI_2 75 231 IPR006501 GO:0004857
Cpe14g00042 600 MobiDBLite consensus disorder prediction 9 23 - -
Cpe14g00042 600 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 233 IPR035513 -
Cpe14g00042 600 SUPERFAMILY Pectin lyase-like 282 596 IPR011050 -
Cpe14g00042 600 Gene3D - 280 598 IPR012334 -
Cpe14g00042 600 MobiDBLite consensus disorder prediction 1 28 - -
Cpe14g00042 600 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 232 IPR006501 GO:0004857
Cpe14g00042 600 PANTHER PECTINESTERASE 26 598 - -
Cpe14g00042 600 ProSitePatterns Pectinesterase signature 2. 431 440 IPR033131 -
Cpe14g00042 600 PANTHER PECTINESTERASE 26 598 - -
Cpe14g00042 600 Pfam Plant invertase/pectin methylesterase inhibitor 79 231 IPR006501 GO:0004857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00601 Cpe14g00042 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00474 Cpe-Chr8:3039595 Cpe14g00042 Cpe-Chr14:223595 8.74E-115 dispersed
Cpe08g01334 Cpe-Chr8:9621008 Cpe14g00042 Cpe-Chr14:223595 1.46E-97 dispersed
Cpe13g00358 Cpe-Chr13:3683843 Cpe14g00042 Cpe-Chr14:223595 8.70E-09 dispersed
Cpe14g00042 Cpe-Chr14:223595 Cpe16g00079 Cpe-Chr16:1588437 3.78E-73 dispersed
Cpe20g00567 Cpe-Chr20:3376560 Cpe14g00042 Cpe-Chr14:223595 3.21E-32 dispersed
Cpe18g00040 Cpe-Chr18:906060 Cpe14g00042 Cpe-Chr14:223595 6.32E-36 transposed
Cpe13g00315 Cpe-Chr13:2699643 Cpe14g00042 Cpe-Chr14:223595 1.56E-12 wgd
Cpe14g00042 Cpe-Chr14:223595 Cpe05g00601 Cpe-Chr5:3652067 0 wgd
Cpe14g00042 Cpe-Chr14:223595 Cpe09g00027 Cpe-Chr9:149269 1.85E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00042 - - csv:101214987 1077.77