Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe14g00050 | ATGCATTCACTGGACAAGCTGCAGCTCACTAATACCACCCGCAACTTCCTCCGACCATCGGACGCCGGAATGTGCGACCACACAACCATGATTAAAACCAAGAATGCACGCCGGAGACGGCTCAGAGTTCGTAAACTGAGGTACAAATGGCAGAGGAAGGTACACGCGGCAGAGGAAGGCGAGGGCGACGAATTACTCGAAAATGGAGTTTCGGAATCGAATTGTGATCCAGTACTACTCTTTGAGAACGAATCCATTTCGGCGTCTGATAGTGGAGTGTACAGTGAGATCTCGATCATAGGGCGGAGGAAGGAGATGGAAGATGAAGTTAGAGTGGAATTGGGATTGACGGCGATTAATGATGAGAAGTACGATTTCTTCGCCGTGTACGACGGACACGGTGGCGCGCAGGTGGCGCAGGTGTGCCGCGAGCGTTTGCACCGGATTGTGGCGGAGGAGATTGTGGCTCGGGGAGAGATGGATGAGGCGGAGTGGACGAGGTTGATGGAGAGGTGCTTTGAGAGAATGGACGGCGAAGTGAGTAGCGGTGCTGCTGTGATGAAGACGGTCGGCTCGGCGGTGGTTTCCGCGGTGATCGGAAAGGAGGAGGTGGTGGTGGCCAACTGCGGCGATTGTCGAGCCGTTTTGGGTAGGGATGGAATTGCCTTGCCCTTGTCTAACGATCATAAGCCTGGCAGAGCTGATGAGTTGAAGAGAATTGAATCTGCTGGTGGGAGGGTCATAAACTGGAATGGCTACCGCGTGCTAGGAGTTCTTGCCACTTCAAGATCCATCGGTGATGAATATCTTAAACCATTCGTAATCTCCAAACCAGAAGTGACTGTGACCAAGCGAACCGAAAAGGATGAGTTCCTCATATTAGGAAGTGATGGTCTGTGGGACGTGATTTCGAACGAAATTGCCTGCAACGTAGTAAGGAGATGTTTTGGAGGCAAAATGAAGAGGATTTCATTAAAGGTGGCGAATGACAACCATGTCGCTGAAGCTGCAACAGTGTTGGTGGAGCTTGCGGTGGCTCGTGGAAGCAAGGACAACATCAGTGTAATAGTAGTAGATTTGAGGAAAACAAACAGTTCTTCCTCTCCATGA | 1110 | 51.08 | MHSLDKLQLTNTTRNFLRPSDAGMCDHTTMIKTKNARRRRLRVRKLRYKWQRKVHAAEEGEGDELLENGVSESNCDPVLLFENESISASDSGVYSEISIIGRRKEMEDEVRVELGLTAINDEKYDFFAVYDGHGGAQVAQVCRERLHRIVAEEIVARGEMDEAEWTRLMERCFERMDGEVSSGAAVMKTVGSAVVSAVIGKEEVVVANCGDCRAVLGRDGIALPLSNDHKPGRADELKRIESAGGRVINWNGYRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTEKDEFLILGSDGLWDVISNEIACNVVRRCFGGKMKRISLKVANDNHVAEAATVLVELAVARGSKDNISVIVVDLRKTNSSSSP | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 282020 | 284452 | + | Cp4.1LG14g06690.1 | Cpe14g00050 | 480434 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe14g00050 | 369 | SMART | PP2C_4 | 84 | 358 | IPR001932 | - | |
Cpe14g00050 | 369 | CDD | PP2Cc | 93 | 360 | IPR001932 | - | |
Cpe14g00050 | 369 | ProSitePatterns | PPM-type phosphatase domain signature. | 126 | 134 | IPR000222 | GO:0043169 | |
Cpe14g00050 | 369 | ProSiteProfiles | PPM-type phosphatase domain profile. | 90 | 360 | IPR001932 | - | |
Cpe14g00050 | 369 | Pfam | Protein phosphatase 2C | 97 | 353 | IPR001932 | - | |
Cpe14g00050 | 369 | PANTHER | ALPHABET, ISOFORM E-RELATED | 73 | 362 | - | - | |
Cpe14g00050 | 369 | SUPERFAMILY | PP2C-like | 90 | 361 | IPR036457 | - | |
Cpe14g00050 | 369 | Gene3D | - | 89 | 367 | IPR036457 | - | |
Cpe14g00050 | 369 | PANTHER | PHOSPHATASE 2C FAMILY PROTEIN | 73 | 362 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe13g00356 | Cpe14g00050 | CCT | |
Cpe13g00356 | Cpe14g00050 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe09g00127 | Cpe-Chr9:755694 | Cpe14g00050 | Cpe-Chr14:282020 | 5.05E-77 | dispersed | |
Cpe13g01100 | Cpe-Chr13:8872117 | Cpe14g00050 | Cpe-Chr14:282020 | 8.07E-81 | dispersed | |
Cpe14g00050 | Cpe-Chr14:282020 | Cpe18g00401 | Cpe-Chr18:5219854 | 7.75E-74 | dispersed | |
Cpe14g00050 | Cpe-Chr14:282020 | Cpe02g01730 | Cpe-Chr2:14166055 | 1.06E-75 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe14g00050 | K14497 | - | csv:101214188 | 568.155 |