Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00050 ATGCATTCACTGGACAAGCTGCAGCTCACTAATACCACCCGCAACTTCCTCCGACCATCGGACGCCGGAATGTGCGACCACACAACCATGATTAAAACCAAGAATGCACGCCGGAGACGGCTCAGAGTTCGTAAACTGAGGTACAAATGGCAGAGGAAGGTACACGCGGCAGAGGAAGGCGAGGGCGACGAATTACTCGAAAATGGAGTTTCGGAATCGAATTGTGATCCAGTACTACTCTTTGAGAACGAATCCATTTCGGCGTCTGATAGTGGAGTGTACAGTGAGATCTCGATCATAGGGCGGAGGAAGGAGATGGAAGATGAAGTTAGAGTGGAATTGGGATTGACGGCGATTAATGATGAGAAGTACGATTTCTTCGCCGTGTACGACGGACACGGTGGCGCGCAGGTGGCGCAGGTGTGCCGCGAGCGTTTGCACCGGATTGTGGCGGAGGAGATTGTGGCTCGGGGAGAGATGGATGAGGCGGAGTGGACGAGGTTGATGGAGAGGTGCTTTGAGAGAATGGACGGCGAAGTGAGTAGCGGTGCTGCTGTGATGAAGACGGTCGGCTCGGCGGTGGTTTCCGCGGTGATCGGAAAGGAGGAGGTGGTGGTGGCCAACTGCGGCGATTGTCGAGCCGTTTTGGGTAGGGATGGAATTGCCTTGCCCTTGTCTAACGATCATAAGCCTGGCAGAGCTGATGAGTTGAAGAGAATTGAATCTGCTGGTGGGAGGGTCATAAACTGGAATGGCTACCGCGTGCTAGGAGTTCTTGCCACTTCAAGATCCATCGGTGATGAATATCTTAAACCATTCGTAATCTCCAAACCAGAAGTGACTGTGACCAAGCGAACCGAAAAGGATGAGTTCCTCATATTAGGAAGTGATGGTCTGTGGGACGTGATTTCGAACGAAATTGCCTGCAACGTAGTAAGGAGATGTTTTGGAGGCAAAATGAAGAGGATTTCATTAAAGGTGGCGAATGACAACCATGTCGCTGAAGCTGCAACAGTGTTGGTGGAGCTTGCGGTGGCTCGTGGAAGCAAGGACAACATCAGTGTAATAGTAGTAGATTTGAGGAAAACAAACAGTTCTTCCTCTCCATGA 1110 51.08 MHSLDKLQLTNTTRNFLRPSDAGMCDHTTMIKTKNARRRRLRVRKLRYKWQRKVHAAEEGEGDELLENGVSESNCDPVLLFENESISASDSGVYSEISIIGRRKEMEDEVRVELGLTAINDEKYDFFAVYDGHGGAQVAQVCRERLHRIVAEEIVARGEMDEAEWTRLMERCFERMDGEVSSGAAVMKTVGSAVVSAVIGKEEVVVANCGDCRAVLGRDGIALPLSNDHKPGRADELKRIESAGGRVINWNGYRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTEKDEFLILGSDGLWDVISNEIACNVVRRCFGGKMKRISLKVANDNHVAEAATVLVELAVARGSKDNISVIVVDLRKTNSSSSP 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 282020 284452 + Cp4.1LG14g06690.1 Cpe14g00050 480434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00050 369 SMART PP2C_4 84 358 IPR001932 -
Cpe14g00050 369 CDD PP2Cc 93 360 IPR001932 -
Cpe14g00050 369 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Cpe14g00050 369 ProSiteProfiles PPM-type phosphatase domain profile. 90 360 IPR001932 -
Cpe14g00050 369 Pfam Protein phosphatase 2C 97 353 IPR001932 -
Cpe14g00050 369 PANTHER ALPHABET, ISOFORM E-RELATED 73 362 - -
Cpe14g00050 369 SUPERFAMILY PP2C-like 90 361 IPR036457 -
Cpe14g00050 369 Gene3D - 89 367 IPR036457 -
Cpe14g00050 369 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 73 362 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe13g00356 Cpe14g00050 CCT
Cpe13g00356 Cpe14g00050 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00127 Cpe-Chr9:755694 Cpe14g00050 Cpe-Chr14:282020 5.05E-77 dispersed
Cpe13g01100 Cpe-Chr13:8872117 Cpe14g00050 Cpe-Chr14:282020 8.07E-81 dispersed
Cpe14g00050 Cpe-Chr14:282020 Cpe18g00401 Cpe-Chr18:5219854 7.75E-74 dispersed
Cpe14g00050 Cpe-Chr14:282020 Cpe02g01730 Cpe-Chr2:14166055 1.06E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00050 K14497 - csv:101214188 568.155