Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00111 GAACATCCGGCCTCCAATTCTAATACACCGACGCCCAATGGGAGGGATGCGGAATTACATATTTACCCTCACCGGAGTGAAGTTCAATTGCCATCTGTAAATTGTACGGCATTTTCATGGACCGAGAAGTGCCGTACGAGGAGTTCTGTAATTGTGAATGAAGAAGGAGATCGAGACCGTCAAAACTTCGACACGTGTCCGGAATACTTCCGTTGGATTCACGAGGATCTAAGGCCGTGGACGCGAACGGGGATCACGAGGGAGATGGTGGAGAGCGGGCGGCCAAAGGCGGGTTTCCGGCTGGTGATAATCGACGGTAGGGCTTACGTGGAGAAATTTATGGATGCGTATCAAAGTAGGGATAAGTTTACGCTGTGGGGGATCCTACAGTTGTTACGGTTGTACCCTGGTAAAATTCCCGATTTAGACCTCATGTTCAATTGCGAGGACCGGCCCAACATTTTCATTGGTGACTATATTGGGCCCGGGCCCAATTCGACGGCCCCACCTCCTTTGTTCCGATACTGCGGAGATGATGACACGTTGGACATAGTTTTTCCTGATTGGTCCTTCTGGGGATGGCCTGAGATAAATATAAAGCCATGGGTACCCCTGATGGAAGATCTAAAACAAGGCAACAAAAGGACAAAATGGTCAAATAGAGAAGCTTATGCTTATTGGAAGGGGAATATTAAAGTTTCTATGGTTCGATACAAACTTCTGGAATGCAATCTCTCTCGTGAGCACGATTGGAAGGCTCGTGTGTTCATGCAGGATTGGGATAAAGAACAGGAACAACGATTCAAAAACTCCAATCTAGCTGACCAATGTATTCATAGGTATAAAATATACGTGGAGGGGGTTGGTTGGTCGGTAAGTCTTAAATACATTCTTGCTTGTGATTCAGTGACATTGATGGTAAAGCCGTATTACTATGATTTCTTCACTAGAAGTTTAGTGCCAATGCATCACTATTGGCCAATCAAAGATGACGGTGACATGTGCAACTCTATCAAGTTTGCCGTCGATTGGGGCAATACCCACCAACAAAAGGCACGGGCAATTGGGAAGGCAGCGAGCAAGTTTATCGAGGAGCAGCTAAGGATGGAGAAGGTGTATGACTACATGTTTCACAGTCTAAATGAATACTCCAAACTCTTAGCCTTCAAGCCAACCATCCCACCAAATGCTACTGAACTCTGCTTGGAGGAATTGGCTTGCCCTGCCCAAAACTTAGCCACCAAGTTTATGATCGATACTCTCGTAAAACGTCCTTCCTTTTCAAGCCCTTGCTCTTTGCTTCCGCCCTTTAGCCCAACCGATCTCGACAATATTCGAATCAGAAAAGAGACTCCAATCAAACAAGTCGAAACATTCCTCGAGAAGTTCCTTGAACCCATTGAAAACTCCTTTGAATCTTCTAATCAAAACCCCAAAGCCCCAACGGGCGGTGTTGCCAAATACACCCCTTTGGAGCTACAAGTTGTGGACCTTAAGAAGAGGTACCCTGATGTTCTTCTCATGGTGGAGGTTGGTTACAGGTACAGATTTTTTGGCCAAGATGCTGAAATAGCAGCTCGTGTTTTGGGTATTTATGCCCATTTGGATCGTAATTTTATGACTGCGAGTATACCCACGTTTAGATTGAATGTGCATGTGAGGAGGCTGGTTAGTGCAGGGTATAAGGTGGGTGTTGTCAAGCAAACTGAAACCGCTGCGATGAAGGCTCATGGGTCGAATAAGTTAGGCCCCTTTTGCAGGGGACTATCGGCTTTGTATACTAAAGCAACATTGGAGGCAGTCCAGAATTTAGGGGGAGCTGAGGAGGGATGTGGGGGAGAGAGTAATTACTTGTTCTGTGTAGTTGAAAAGAGCATGTTGATGGATAATTTGGACCGTAGAATCGAATATGGGGTTGATGTGAAAATTGGGATGGTTGCCATGGAGATATCAACTGGGGATGTTATTTATAGGGAATATGATGATAACTTCATGAGAAGTGGGCTTGAGGCAATGCTCTTGAGCTTGTCTCCTGCAGAGCTTCTTCTTGGGGATCCCATATCAAAGGCAACAGAGAAGTTATTACTAGGTTATGCTGGACCTGCTTCAAATGTCCGTGTGGAGCATGTTTCACGAGATTGCTTTAAAGATGGCAGTGCACTTGCTGAAGTGATGTCTTTGTATGAAAACATTGACAAAGACAACTTAGCAGCTGATCATCACGACCCTGATACAATGTTGGCTGGACGAAAAAGTGATCGCATAGCAATTAAGGAAATAATGAACATGCCAAATTTAGCTCTTCAAGCATTGGCCTTGACCATTCGTTACTTAAAGCAATTTGGTTTAGAAAGAATTGTGTCCTTGGGATCTTCTTTTAGGCCATTCTCATGCAAAATGGAGATGACCCTCTCAGGCAATACACTCACACAACTTGAGATAACACATCCTTTATGTGAAAGAGACATGATAATTGCTCGTCAAGAGGCCGTTTCTGAGATTGCTGCAGCTATGGTATCTTCAAAAGTATCTCAAAATATCAGAGAGTCAGATGAAGAAGATTCTGATGTAATGGTCATTGAACCAGAATTGAATTATATACTTTCTTCAGTGTTAACAACCTTGGGAAGGGCACCAGATATTCAGCGTGGAATAACACGAATCTTTCACCGAACTGCAGCCCCGTCAGAGTTCATTGCAGTTATTCAAGCTATTTTATATGCGGGGAAACAGCTTCAGCAGTTTCACATTGATGAAGAGGATGACAATTATTCCAGTGAAATTATTCAAGCTATTTTATATGCGGGGAAACAGCTTCAGCAGTTTCACATTGATGAAGAGGATGACAATTATTCCAGTGAAAGTATGATTGGCTCCAAGCTCCTAAGAAAGCTGATTTTATCTGCTTCCTCCTCTGGTTTGATTAGCATTGCTGCAAAACTTTTGTCAACGATCAGCAAAGAAGCTGCAGATCAAGGGGACCTTCCTAACCTAATGATCATCAATAATGACCAATTTCCGAAGGTTGCTAGAGCTCGGAAGGAGGCTCAATCTGCAAGAGAGAAATTGGATTCTCTGATCACCGTATACCGTAAGCAGCTTGGAATGCGGAAGTTGGAGTTCATTAGTGTGTCTGGAACTACGCATTTGATTGAGTTGGCCTTAGATGTAAAGGTACCCTCTAATTGGGTGAAGATCAATAGTACAAAGAAAACTATAAGATATCACCCACCGGAAGTACTGGCTGCCTTAGACGAGCTATCATTGGCAAATGAGGAGCTCATGGTAGCATCTCGGGATGCTTGGGATGGCTTTCTAAGTGGATTCAGCAGATATTATGCAGAGTTTCAATCTGCTGTTCAAGCACTGGCTTCCATTGACTGTCTCTATTCGTTAGCTATTCTCTCAAGACATAAGAACTATGTTCGTCCAGAGTTTGTACATGATGATGAACCTGCTCAGATAGTTATATGTTCTGGACGCCATCCGGTTTTGGAGAGTACATTACAAGGCAATTTTGTCCCGAATGACACGAATTTGGACGTGAATGGAGAGCATTGTCAAATTGTAACAGGACCAAACATGGGGGGAAAAAGTTGCTATATTCGACAAGTTGCTCTCATTGCTCTAATGGCTCAGGTCGGTTCCTATGTACCAGCATTCTCCGCGAAGCTTCACGTCCTGGACGGTATATACACTCGAATGGGTGCTTCTGACAGTATTCAACAAGGTAGAAGCACCTTCTTAGAAGAAATGACTGAGACTTCACATATACTCCATCATTCCACATCACGTTCCTTGGTCATAATTGACGAGCTTGGGAGAGGAACAAGCACTCACGACGGCGTGGCCATTGCATATGCAGCTTTGCAAAATCTTCTCCACCACAAGAAATGTTTGGTCCTCTTCGTTACCCATTACCCTAAAGTTGCTGATATTACAAAGGAATTCCCAGTATCTGCAGGGGTATACCATGTCTCATATCTGACTTCACACAAAACGCCAAGCTTCTCAGTCCCAAAATCCTCTCAGGATGTGATTTACCTATATAAGCTCGTTCCTGGAATTGCGGAGAGCAGTTTTGGTTTCAAGGTTGCCCAACTTGCACAGATACCTTTATCATGTATTGCACGAGCCACAGAAATGGGGGTATGGTTAGAAGAAATAGTAACCAGAAGAGCACAACGCAAAACCAGAGAAATACATTTACAAAAAGCATCAGGCAAGGGATTGGAATTGGAAAGCTCCGAGTGCTTCCTTGAAGATAGAATTGATGCTTATGAGGAATTCTTTCTGTTCTTGAAAGCTACAATATGTTCTCCTGATGATATGGGGAAACGTTTCCTTCAATTTTCCCAAGCTAGAAGCATGGCCATGGACTTGTTAGGAAGTATTTTGTGTACAGAATTTTCCCTTCTTCGCAAAAGACAGCCTCCTCAGATGCAAATCTTTGAACTTGGCGAGCCGGAAGAGAGAAAAGAGAAAGGGTTATTGAGATTGGCAACTGGGTTTCACCGGAAAGTCCGAAATTCAGAAAACTGGCTACCACCCGGCTGGACTGTGAAGGTCAAAGTGAGGAAGAGTGGCAAGAAGGATAAGTATTATTTTGAACCCTCAAGTCAAATGAGATTTAATTCTAGGGCAGAGGTGTTTAGATACCTCAAAACTGCTGCAATCAGTCATCCTGAATCTGAAGAGAGCAGAACCGTGGAGCAACCAGAGAACAATGTGGAAGTTAAGAAGACTATAGCAAAAGGGTTACCTCCTGGATGGATCAGAGAAATCAGAGTAACGAGGACTGCTAACAGAATAAGAAGAGATTCATTTTACATTAATCCTGTAAATGGAAATGCGCTTCGCTCGTTGAGGGATGTACATCGGTATCTAACAAGTGGAAAGGTGAGCCGATTAGCTTATAAATCAAGGAGCCAGAGCAACAGCAACAGCAACATTGAGTTTCAGCACGATGATATCTCTTCACCTGCTGTCTCCAAGAAAGAGATGCTAGCGATTGGCAAAGCAAAGAGACAGATTATATGGAGCGACAACTCACCGGAACCGAGTGAAATAGCAGATGATGAAGCTATTTTTCCAAAGGCTGCAAGTGTTGGAGAAAGAATGGCCTTTTTGAAACCTAATTTAACTCACGGGAGGATAGGCGCTAAGTTGCACTGCTCAACTCCCGAAGAGGCAAAAGGACGTGAGCAATCAGAAGGAAAGAATACTTTTTCCGAATTTGTGTCAACTCCTGATAAATCCATCCAACACAAGTGCACTAGTGAGAATGGGGCAACGAAGATTGAGAGTAGAAAGAGACAAAGGAAAAGTAAAGACATAAACTTGCGATGCCGTGCTTCAAAGCGACTTGCAGGGCTCCAAGCTGAGCCAGTGCTTGAAGCTAAAACTGATCGCCGAGCGTGTTCGGTTGCATGTGAAGAGTCTGATAAGCAAGTAGCCAGTACAACTAAGTGGCCATCTCAATGTCCTGAAAAGCCTGATGTCAAGCATGAAACAAAGAGCATAATTGACTCTCCTAAAATTGACACAAATCTAGATTCAAGTAGAAAAGAACATTCTGCTGTTGACTTGTCCATTCTGCCTCAGAAGGTTAAGAAGATGAAATCTGAAGATGCATATGAGCAGCAGCAGCAGCCGAAATGCAATTCCTTTCTGCCTTCAGAGGACGTTCTGGAAAAGCATGTAGGGCAGGTGGAAAGCGATGATAAGGCTGATGTGAAAAAACAAGGCCCTCTTCTTAAACTGCCTATGGAGGACTTACTGACTGATCCTTGCATTGCATTTGCAGTTAAAACGCTTACTGGAGACGTTTTTGACGCATCCATAAGCTCAGAAGCATCACTGATGCCAAACAATATCGATCGGCCTTTCGTGGCCTTTACTCCAAATGAGAGGAGAAACTTGGAATCAGAAAACAAGCTTAATGAGAAGTTGCCATCTCCAGAACTTCCTGTTACTCGAGTTGGGAAAGTCGAAAATAACAACATTGTTGAAAAGCTAGACTCGACTCTGAAGTTGCCAGTTGGGGAAATATGGGCAGACCCTTGTATAGAATTTGCTATTAAAACTCTTACTGGTGAGATCCCACTTGTTAACAATCCAGATATTGAGGATTACTTTCACCAATTTGCCCCCTCAAAAACCGAAGGAACTAACGCAAATGCCTCGAATCATACTGTGTTAGCCAGAAGGGGCAGGTTATTCAAGCACTGGAGGCATCTCTTAAGACCAACTTCTGAAGCTGTGGAACTGGTTTGCACCAACAAGAAAGCAACACTTTCAAAGGCTAATACCAACTTTATAACTTGTATAGTTTCGTTTTGGTCAGCCAACCCTCTTTTGCTTAAGTTTTGTACCTTGCCTCCTGGGCAACGTAAT 6396 43.54 EHPASNSNTPTPNGRDAELHIYPHRSEVQLPSVNCTAFSWTEKCRTRSSVIVNEEGDRDRQNFDTCPEYFRWIHEDLRPWTRTGITREMVESGRPKAGFRLVIIDGRAYVEKFMDAYQSRDKFTLWGILQLLRLYPGKIPDLDLMFNCEDRPNIFIGDYIGPGPNSTAPPPLFRYCGDDDTLDIVFPDWSFWGWPEINIKPWVPLMEDLKQGNKRTKWSNREAYAYWKGNIKVSMVRYKLLECNLSREHDWKARVFMQDWDKEQEQRFKNSNLADQCIHRYKIYVEGVGWSVSLKYILACDSVTLMVKPYYYDFFTRSLVPMHHYWPIKDDGDMCNSIKFAVDWGNTHQQKARAIGKAASKFIEEQLRMEKVYDYMFHSLNEYSKLLAFKPTIPPNATELCLEELACPAQNLATKFMIDTLVKRPSFSSPCSLLPPFSPTDLDNIRIRKETPIKQVETFLEKFLEPIENSFESSNQNPKAPTGGVAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAMKAHGSNKLGPFCRGLSALYTKATLEAVQNLGGAEEGCGGESNYLFCVVEKSMLMDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTMLAGRKSDRIAIKEIMNMPNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEITHPLCERDMIIARQEAVSEIAAAMVSSKVSQNIRESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGKQLQQFHIDEEDDNYSSEIIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHKKCLVLFVTHYPKVADITKEFPVSAGVYHVSYLTSHKTPSFSVPKSSQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQKASGKGLELESSECFLEDRIDAYEEFFLFLKATICSPDDMGKRFLQFSQARSMAMDLLGSILCTEFSLLRKRQPPQMQIFELGEPEERKEKGLLRLATGFHRKVRNSENWLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAISHPESEESRTVEQPENNVEVKKTIAKGLPPGWIREIRVTRTANRIRRDSFYINPVNGNALRSLRDVHRYLTSGKVSRLAYKSRSQSNSNSNIEFQHDDISSPAVSKKEMLAIGKAKRQIIWSDNSPEPSEIADDEAIFPKAASVGERMAFLKPNLTHGRIGAKLHCSTPEEAKGREQSEGKNTFSEFVSTPDKSIQHKCTSENGATKIESRKRQRKSKDINLRCRASKRLAGLQAEPVLEAKTDRRACSVACEESDKQVASTTKWPSQCPEKPDVKHETKSIIDSPKIDTNLDSSRKEHSAVDLSILPQKVKKMKSEDAYEQQQQPKCNSFLPSEDVLEKHVGQVESDDKADVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVFDASISSEASLMPNNIDRPFVAFTPNERRNLESENKLNEKLPSPELPVTRVGKVENNNIVEKLDSTLKLPVGEIWADPCIEFAIKTLTGEIPLVNNPDIEDYFHQFAPSKTEGTNANASNHTVLARRGRLFKHWRHLLRPTSEAVELVCTNKKATLSKANTNFITCIVSFWSANPLLLKFCTLPPGQRN 2132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 602249 615690 + Cp4.1LG14g06090.1 Cpe14g00111 480495

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00111 2132 Pfam MutS domain III 803 1133 IPR007696 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 Gene3D - 1141 1418 IPR027417 -
Cpe14g00111 2132 SUPERFAMILY DNA repair protein MutS, domain III 803 1138 IPR036187 -
Cpe14g00111 2132 Pfam Glycosyl transferase family 90 64 458 IPR006598 -
Cpe14g00111 2132 Gene3D - 1561 1677 - -
Cpe14g00111 2132 Pfam MutS domain II 639 784 IPR007860 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 SMART DNAend 791 1168 IPR007696 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 ProSitePatterns DNA mismatch repair proteins mutS family signature. 1266 1282 IPR000432 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 SUPERFAMILY DNA repair protein MutS, domain II 613 817 IPR036678 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 473 1425 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Cpe14g00111 2132 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1577 1658 IPR001739 GO:0003677
Cpe14g00111 2132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1141 1383 IPR027417 -
Cpe14g00111 2132 Gene3D - 983 1109 - -
Cpe14g00111 2132 Pfam MutS domain V 1188 1382 IPR000432 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 Gene3D DNA repair protein MutS, domain I 482 608 IPR016151 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 Pfam MutS domain I 489 599 IPR007695 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 MobiDBLite consensus disorder prediction 1730 1779 - -
Cpe14g00111 2132 CDD MBD 1587 1637 - -
Cpe14g00111 2132 Pfam Methyl-CpG binding domain 1581 1633 IPR001739 GO:0003677
Cpe14g00111 2132 Pfam Methyl-CpG binding domain 1508 1558 IPR001739 GO:0003677
Cpe14g00111 2132 MobiDBLite consensus disorder prediction 1818 1859 - -
Cpe14g00111 2132 SUPERFAMILY DNA-binding domain 1583 1635 IPR016177 GO:0003677
Cpe14g00111 2132 SUPERFAMILY DNA repair protein MutS, domain I 482 597 IPR016151 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 Gene3D - 1504 1560 - -
Cpe14g00111 2132 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1505 1575 IPR001739 GO:0003677
Cpe14g00111 2132 MobiDBLite consensus disorder prediction 1829 1859 - -
Cpe14g00111 2132 Gene3D MutS, connector domain 612 801 IPR036678 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 SMART mutATP5 1185 1384 IPR000432 GO:0005524|GO:0006298|GO:0030983
Cpe14g00111 2132 MobiDBLite consensus disorder prediction 1740 1762 - -
Cpe14g00111 2132 SUPERFAMILY DNA-binding domain 1512 1559 IPR016177 GO:0003677
Cpe14g00111 2132 MobiDBLite consensus disorder prediction 1763 1779 - -
Cpe14g00111 2132 Coils Coil 1009 1029 - -
Cpe14g00111 2132 PANTHER DNA MISMATCH REPAIR PROTEIN MSH3 473 1425 - -
Cpe14g00111 2132 CDD MBD 1512 1555 - -
Cpe14g00111 2132 Gene3D - 802 968 - -
Cpe14g00111 2132 SMART cap10 138 390 IPR006598 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00111 K08736 MSH3; DNA mismatch repair protein MSH3 - csv:101214720 1579.69
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe09g00096 Cpe14g00111 CCT
Cpe09g00096 Cpe14g00111 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00091 Cpe-Chr9:527520 Cpe14g00111 Cpe-Chr14:602249 1.92E-34 dispersed
Cpe09g00096 Cpe-Chr9:544636 Cpe14g00111 Cpe-Chr14:602249 0 dispersed
Cpe14g00108 Cpe-Chr14:594103 Cpe14g00111 Cpe-Chr14:602249 0 dispersed
Cpe14g00111 Cpe-Chr14:602249 Cpe17g00355 Cpe-Chr17:2515211 8.31E-144 dispersed
Cpe20g00820 Cpe-Chr20:7417591 Cpe14g00111 Cpe-Chr14:602249 1.22E-08 dispersed
Cpe14g00110 Cpe-Chr14:601367 Cpe14g00111 Cpe-Chr14:602249 1.12E-50 tandem
Cpe03g01548 Cpe-Chr3:12033756 Cpe14g00111 Cpe-Chr14:602249 1.74E-21 transposed
Cpe05g00258 Cpe-Chr5:1460663 Cpe14g00111 Cpe-Chr14:602249 2.08E-30 transposed
Cpe09g00845 Cpe-Chr9:7789890 Cpe14g00111 Cpe-Chr14:602249 4.77E-17 transposed
Cpe14g00004 Cpe-Chr14:23950 Cpe14g00111 Cpe-Chr14:602249 3.92E-14 transposed
Cpe14g00746 Cpe-Chr14:5682170 Cpe14g00111 Cpe-Chr14:602249 7.11E-37 transposed
Cpe18g00743 Cpe-Chr18:7209797 Cpe14g00111 Cpe-Chr14:602249 1.62E-50 transposed
Cpe14g00111 Cpe-Chr14:602249 Cpe05g00314 Cpe-Chr5:1747256 4.35E-07 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g651 . . Bda05g00063 . Bpe03g00292 . . . Cmo16g00136 Cmo18g01264 . . . . Sed01g3910 . Cpe14g00111 Bhi01g01334 Tan01g0265 Cmetu09g1530 . Hepe07g0168 Mch10g0165 . Cla01g00286 Cam01g0298 Cec01g0291 Cco01g0304 Clacu01g0297 Cmu01g0284 Cre09g2225 . . . . Lsi05g01239 Csa05g00308 Chy09g01198 . Blo07g00416 . . . . . . . . . . Cma16g00131 Cma18g01241 . Car18g01146 Cpe09g00096 . Bhi12g00219 . . . . . . Cla05g00869 Cam05g0957 Cec05g0962 Cco05g0962 Clacu05g0943 Cmu05g0901 Cre05g0985 . Csa03g01700 Chy06g00936 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 5 2 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00111 Cpe_Chr14 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0