Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00116 ATGGGTATGGAGTTGACACGCTTCCTTCTCATTTTCATCGGCTACTTCGAGCTCTGCATTTTGAGCTCCAATGGTATTATACACCAGAATGAGATTATTATCGACAGAGAAAGCTTGATTTCTTTCAAAGCTTCGCTTGAGACCTCCGAAATTCTGCCATGGAACTCATCACTTCCTCACTGCTTTTGGACTGGAGTTTCTTGCCGGCTCGGTCGAGTTACAGAGCTCTCTCTTTCATCTCTTTCGCTCAAAGGCCGACTCTCTCAGTCGCTTTTCAACATTTCGAGTCTCTCTGTTCTTGACCTTTCAAACAACTTTCTCTATGGCTCAATCCCACCTCAGATATCCAATCTTCGGAGCTTGAAGGTGCTCGCTCTCGGCGATAATCAGTTTTCCGGTGATTTCCCAATCGAGCTCACCGAGTTGACTCGGTTGGAGAATCTCAAGTTGGGGACTAATTTATTCACAGGTAAAATCCCGCCGGAGCTTGGAAATTTGAAGCTGCTACGGACCCTTGACCTCTCCAGCAATGCCTTCGCCGGAAATGTCCCGACCCACATCGGAAACCTGACGAGGATTTTATCATTGGACCTCGGTAACAATCTTTTATCAGGTTCACTCCCATTGACTATCTATACTGACCTTAAATCTTTAACGTCTCTGGACATTTCAAACAATTCGTTTTCGGGTTCAATCCCACCTGAAATTGGAAACCTACAGCATTTGACTGATCTTTATATCGGCATTAACCACTTTTCCGGTGAGTTGCCTCCTGAAGTTGGTAACCTTGTATTGCTGGAGAACTTTTTTTCGCCTTCTTGTTCTTTAACTGGTCCATTGCCTGACGAACTATCCAAGTTGAAATCATTGAGCAAACTGGACCTTTCATACAACCCACTTGGGTGTTCTATCCCGAAATCGATTGGTGAGTTACAGAACTTAACTATATTGAATCTGGTTTACACTCAGCTTAATGGTTCTATTCCTGCTGAGCTCGGGAGGTGCAGAAATTTGAAAACATTGATGCTTTCATTCAACTTTCTATCTGGGGTGTTGCCACAAGAGCTTTCAGAGCTTCCCATGTTGACATTTTCTGCTGAGAAGAATCAGCTTTCTGGAAACCTTACGCAGCTGGTTTTGGTAGACAATCAGATTGTTGGGGCAATACCAGAGTACTTCTCAAACCTTTCCTTAATGGTAATCAACCTTGACTCTAATAATTTTACCGGTTGTTTACCTAGAAATATATGGAACTCAGTGGATTTAATGGAGTTTTCTGCCGCAAATAACCTGTTGGAGGGTCATCTCCCTTCAGAAATTGGCTATGCAGCTTCACTTGAGAGGCTTGTTCTCAGCAGCAATAGGTTGACAGGCGGTATACCAGATGAGATTGGAAATCTCACAGCTCTTTCAGTTCTAAATTTGAATTCCAATCTGCTTGAAGGAACTATTCCTACCATGCTTGCAGATTGCACTTCACTTACCACGTTGGACCTTGGAAACAATAGTCTAAAAGGGTCGATTCCTGAAAGACTTGCTAACCTTACTGAATTACAGTGTCTAGTTCTGTCACACAACATGTTATCTGGAGCCATACCTTCCAAGCCCTCTGCTTATTTTCGACAGGTTACTATTCCAGATTTGAGCTTTGTTCAGCATCATGGTGTTTTCGATCTGTCTCATAATAGATTGTCTGGTACCATACCTGATGAACTGGGGAATTGTATTGTTGTAGTTGATCTTTTGCTGAATAATAATCTACTTTCTGGAGAGATTCCTAGATCTCTCTCTCAGTTAACGAACCTGACAACCTTGGATTTGTCTAGCAATATGCTTACTGGTCCTATTCCCACAGAGATTGGCAATGCTCTCAAGCTCCAAGGCCTGTATCTATGGAATAATCACCTGGTGGGTACAATCCCCGAAAGCTTCAGTCATTTGAGTAGCTTGGTAAAGTTGAACTTGACTGGAAATAAATTATCTGGTTCAATTCCAAGAACTCTTGGTGATCTGAAAGCTCTAACTCATTTGGATTTAAGTTCTAATGAGTTGGATGGTGATCTTCCTTCTTCTCTGTCCAACATGTTGAATCTTGTCGGGCTTTATGTACAGGAGAACAGGCTTTCTGGTCAGGTTGTTGAACTTTTCCCAAGTTCCATGACATGGAAGGTTGAAACTTTGAATTTGAGTAATAACTATTTTGAGGGTGTCCTTCCACGAACATTGGGCAACCTTTCATACTTGACAACTTTGGATCTTCATGGAAATAAATTCACAGGGCAAATCCCTTCAGATTTTGGGGATCTTATGCAACTTGAATACTTGGATGTTTCAAATAACAAGCTCTCAGGAGAAATTCCAGAGAAAATATGCAGCCTTGTCAATATGGTTTACCTGAATATGGCAGACAACAGCCTGGAAGGGCCAATTCCGAGAAGTGGCATTTGCCAGAATCTATCCAAAAGTTCACTTGTGGGTAACAAAGGCCTTTGTGGAAGAATCATGGGTTTGAATTGCCGGATCAAAATCTTGGAGAGATCAGCAGCATTGAATGCTTGGAGCGTTGCAGGGATCATCATTGTTAGTGTTCTTATCGTTCTAACTATCACATTCGCCATGCGGAGATGGATCATTAGAACCCAGAGAGAGAACGATCCAGAGGAAATGGAGGAAAGCAAATTAAAATGTTTCATAGACCCCAATCTCTATTTCTTAAGCAGCAGCAGCAGATCGAGAGAGCCTTTAAGCATCAATGTAGCCACGTTCGAGCAACCCCTTCTGAAATTAACTTTGGCTGATATTCTCGAAGCAACCAATAACTTCTGTAAAACAAACATCATTGGAGATGGAGGATTCGGGACAGTGTACAAGGCCACATTACCTGATGGAAAAATTGTTGCCGTGAAGAAACTAAGCGAAGCAAAAACACAGGGGCACAGAGAATTTATAGCTGAAATGGAAACCATAGGCAAAGTGAAGCACAATAATCTTATTGCTTGTGTTTGCTTATCAGAAAATCCTGCTAACAGACCTTCCATGCTTCAGGTATTGAAGTTTCTTAAAGGGATCAAAGATGTGTAA 3081 42.0 MGMELTRFLLIFIGYFELCILSSNGIIHQNEIIIDRESLISFKASLETSEILPWNSSLPHCFWTGVSCRLGRVTELSLSSLSLKGRLSQSLFNISSLSVLDLSNNFLYGSIPPQISNLRSLKVLALGDNQFSGDFPIELTELTRLENLKLGTNLFTGKIPPELGNLKLLRTLDLSSNAFAGNVPTHIGNLTRILSLDLGNNLLSGSLPLTIYTDLKSLTSLDISNNSFSGSIPPEIGNLQHLTDLYIGINHFSGELPPEVGNLVLLENFFSPSCSLTGPLPDELSKLKSLSKLDLSYNPLGCSIPKSIGELQNLTILNLVYTQLNGSIPAELGRCRNLKTLMLSFNFLSGVLPQELSELPMLTFSAEKNQLSGNLTQLVLVDNQIVGAIPEYFSNLSLMVINLDSNNFTGCLPRNIWNSVDLMEFSAANNLLEGHLPSEIGYAASLERLVLSSNRLTGGIPDEIGNLTALSVLNLNSNLLEGTIPTMLADCTSLTTLDLGNNSLKGSIPERLANLTELQCLVLSHNMLSGAIPSKPSAYFRQVTIPDLSFVQHHGVFDLSHNRLSGTIPDELGNCIVVVDLLLNNNLLSGEIPRSLSQLTNLTTLDLSSNMLTGPIPTEIGNALKLQGLYLWNNHLVGTIPESFSHLSSLVKLNLTGNKLSGSIPRTLGDLKALTHLDLSSNELDGDLPSSLSNMLNLVGLYVQENRLSGQVVELFPSSMTWKVETLNLSNNYFEGVLPRTLGNLSYLTTLDLHGNKFTGQIPSDFGDLMQLEYLDVSNNKLSGEIPEKICSLVNMVYLNMADNSLEGPIPRSGICQNLSKSSLVGNKGLCGRIMGLNCRIKILERSAALNAWSVAGIIIVSVLIVLTITFAMRRWIIRTQRENDPEEMEESKLKCFIDPNLYFLSSSSRSREPLSINVATFEQPLLKLTLADILEATNNFCKTNIIGDGGFGTVYKATLPDGKIVAVKKLSEAKTQGHREFIAEMETIGKVKHNNLIACVCLSENPANRPSMLQVLKFLKGIKDV 1026
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 625412 629317 - Cp4.1LG14g05980.1 Cpe14g00116 480500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00116 1026 Gene3D Ribonuclease Inhibitor 34 141 IPR032675 -
Cpe14g00116 1026 Gene3D Ribonuclease Inhibitor 142 213 IPR032675 -
Cpe14g00116 1026 Gene3D Ribonuclease Inhibitor 373 424 IPR032675 -
Cpe14g00116 1026 PRINTS Leucine-rich repeat signature 218 231 - -
Cpe14g00116 1026 PRINTS Leucine-rich repeat signature 599 612 - -
Cpe14g00116 1026 ProSiteProfiles Leucine-rich repeat profile. 493 516 IPR001611 GO:0005515
Cpe14g00116 1026 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 363 705 - -
Cpe14g00116 1026 SUPERFAMILY L domain-like 543 832 - -
Cpe14g00116 1026 ProSitePatterns Protein kinases ATP-binding region signature. 947 970 IPR017441 GO:0005524
Cpe14g00116 1026 SUPERFAMILY L domain-like 56 363 - -
Cpe14g00116 1026 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1000 1025 - -
Cpe14g00116 1026 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 872 998 - -
Cpe14g00116 1026 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 70 136 - -
Cpe14g00116 1026 Gene3D Ribonuclease Inhibitor 545 841 IPR032675 -
Cpe14g00116 1026 Gene3D Ribonuclease Inhibitor 214 372 IPR032675 -
Cpe14g00116 1026 SUPERFAMILY L domain-like 272 534 - -
Cpe14g00116 1026 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 134 348 - -
Cpe14g00116 1026 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1000 1025 - -
Cpe14g00116 1026 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 134 348 - -
Cpe14g00116 1026 SUPERFAMILY Protein kinase-like (PK-like) 922 999 IPR011009 -
Cpe14g00116 1026 Pfam Leucine rich repeat 626 684 IPR001611 GO:0005515
Cpe14g00116 1026 Pfam Leucine rich repeat 469 528 IPR001611 GO:0005515
Cpe14g00116 1026 Pfam Leucine rich repeat 724 782 IPR001611 GO:0005515
Cpe14g00116 1026 Gene3D Ribonuclease Inhibitor 429 544 IPR032675 -
Cpe14g00116 1026 Pfam Leucine Rich Repeat 290 311 IPR001611 GO:0005515
Cpe14g00116 1026 Pfam Leucine Rich Repeat 217 239 IPR001611 GO:0005515
Cpe14g00116 1026 Gene3D Phosphorylase Kinase; domain 1 904 1010 - -
Cpe14g00116 1026 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 872 998 - -
Cpe14g00116 1026 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 723 811 - -
Cpe14g00116 1026 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 136 - -
Cpe14g00116 1026 Pfam Leucine rich repeat N-terminal domain 35 68 IPR013210 -
Cpe14g00116 1026 Pfam Protein kinase domain 944 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00116 1026 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 363 705 - -
Cpe14g00116 1026 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 723 811 - -
Cpe14g00116 1026 SMART LRR_sd22_2 372 398 - -
Cpe14g00116 1026 SMART LRR_sd22_2 599 625 - -
Cpe14g00116 1026 SMART LRR_sd22_2 671 697 - -
Cpe14g00116 1026 SMART LRR_sd22_2 166 192 - -
Cpe14g00116 1026 SMART LRR_sd22_2 491 517 - -
Cpe14g00116 1026 SMART LRR_sd22_2 769 795 - -
Cpe14g00116 1026 SMART LRR_sd22_2 287 313 - -
Cpe14g00116 1026 SMART LRR_sd22_2 94 120 - -
Cpe14g00116 1026 SMART LRR_sd22_2 215 241 - -
Cpe14g00116 1026 ProSiteProfiles Protein kinase domain profile. 941 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00116 1026 SMART LRR_typ_2 94 118 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 287 311 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 467 491 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 190 214 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 769 793 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 745 768 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 492 515 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 142 166 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 671 695 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 599 623 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 647 670 IPR003591 -
Cpe14g00116 1026 SMART LRR_typ_2 215 239 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00116 Cpe-Chr14:625412 Cpe09g00938 Cpe-Chr9:8414622 1.10E-118 dispersed
Cpe17g00647 Cpe-Chr17:5265364 Cpe14g00116 Cpe-Chr14:625412 1.94E-07 transposed
Cpe14g00116 Cpe-Chr14:625412 Cpe09g00101 Cpe-Chr9:560966 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62819 PF00069 Pkinase 3.00E-08 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00116 - - mnt:21398842 1048.88