Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe14g00118 | ATGTTTCCTTGCTTGATCGCTAGAGCTACGACAATCGACGTGATAACTAGTGGCATGTGTGGAACTAGAAACGGCGCATTACAATTGGTAACATGGGTGGAACATACAGAATATGATGAGACTGTTATACACCAGCTTTACCGCCAGTTAATTAGTTCAGGCGTCGGTTTCGGTTCACAACGGTGGCTTGCTAACCTTCAAAGACAATGCGAATGTTTGGCGATTCTTATGTCTTCTACTATTCCCACTGAAGATCCTGCAGGAATATCTCCGGGCGGTAGAAGAAGTATGCTGAAGCTATCGCAGCGTATGGTGGATAAATTCTGTTCGGGGCTTTGTAGTTCAAGTTTACATAAGTGGGACAAGCTGGTTGTTGGTAATATTAGTGAAGATGTAAAAGTGATGGCTAGAAAGAGCATCAACGAGCCTGGCGAGCCACCGGGTATCGTGTTGAGTGCTGCAACTTCAGTTTGGATGCCTGTAACTCAGCAGAGGTTGTTTGCATTCTTGCAAGATGATCGCTTACGGAGTGAGTGGGATATTTTATCCAACAGTAGGCCAATGCTAGAGATGGTTCGTATCTCGAAAGGCCAGGATGCGGATAACCGTGTTTCTCTCCTACGTGCTAATCCCATGAATGCTAATGAGAGCACCATGTTCATATTGCAAGAGACTTGGACTGATATATCAGGCTCACTGGTTGTTTACGCTCCAGTCGACACAGCCTCGGTTAGTTTGATGATGCGTGGAGGAGATTCCGCTTACGTATCGCTATTACCATCAGGATTTGCAATTCTCCCCAATGCTACAAACAACGACAAAGATGCATCGATGAAGTCAGGCATGAACAGTGGGCATGATAATGGATGTCTGCTCACAGTAGCATTCCAGATTCTGGTGAATAATCTTCCAACGGCCAAACTCACGGTCGAGTCGGTTGAGACGGTTAACAATCTCATTTTTTGCACCATTCGAAAGATCAAAACTGCCCTTCAAGTATCATAA | 1005 | 45.07 | MFPCLIARATTIDVITSGMCGTRNGALQLVTWVEHTEYDETVIHQLYRQLISSGVGFGSQRWLANLQRQCECLAILMSSTIPTEDPAGISPGGRRSMLKLSQRMVDKFCSGLCSSSLHKWDKLVVGNISEDVKVMARKSINEPGEPPGIVLSAATSVWMPVTQQRLFAFLQDDRLRSEWDILSNSRPMLEMVRISKGQDADNRVSLLRANPMNANESTMFILQETWTDISGSLVVYAPVDTASVSLMMRGGDSAYVSLLPSGFAILPNATNNDKDASMKSGMNSGHDNGCLLTVAFQILVNNLPTAKLTVESVETVNNLIFCTIRKIKTALQVS | 334 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 638199 | 640239 | - | Cp4.1LG14g05990.1 | Cpe14g00118 | 480502 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe14g00118 | 334 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 | 1 | 30 | - | - | |
| Cpe14g00118 | 334 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 1 | 30 | IPR042160 | - | |
| Cpe14g00118 | 334 | Pfam | START domain | 17 | 72 | IPR002913 | GO:0008289 | |
| Cpe14g00118 | 334 | SUPERFAMILY | Bet v1-like | 100 | 328 | - | - | |
| Cpe14g00118 | 334 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 | 30 | 332 | - | - | |
| Cpe14g00118 | 334 | ProSiteProfiles | START domain profile. | 1 | 75 | IPR002913 | GO:0008289 | |
| Cpe14g00118 | 334 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 30 | 332 | IPR042160 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe09g00102 | Cpe14g00118 | CCT | |
| Cpe09g00102 | Cpe14g00118 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe12g00015 | Cpe-Chr12:67744 | Cpe14g00118 | Cpe-Chr14:638199 | 2.18E-150 | dispersed | |
| Cpe14g00118 | Cpe-Chr14:638199 | Cpe15g00750 | Cpe-Chr15:7784636 | 6.70E-107 | dispersed | |
| Cpe14g00118 | Cpe-Chr14:638199 | Cpe17g00350 | Cpe-Chr17:2471558 | 5.44E-121 | wgd | |
| Cpe14g00118 | Cpe-Chr14:638199 | Cpe03g01710 | Cpe-Chr3:12998014 | 9.26E-141 | wgd | |
| Cpe14g00118 | Cpe-Chr14:638199 | Cpe09g00102 | Cpe-Chr9:569079 | 8.65E-09 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe14g00118 | K09338 | - | csv:101218216 | 528.094 |