Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00123 ATGGCATCTTCTCGTCTGGCTGGAGGATTAGCTCAGTCTCCATCAAGTTCTGGGATTTTCTACCAAGGGGAAGGGCAGTCCCCAGCTATTGTTAATTCTCACTTGGGCCAATCATTTGCAAATTCATCAAATTCAATCCCAGGAACTGGATGTTCTGATTTTGGTCCAGTTTCCGGAGACATGAACAATGCAGTTTTAAATAGTGTGGCAAATTCAGGACCCAGTGTGGGTGCAAGTTCATTAGTTACAGATGCAAACTCTGCCCTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCATACATGCGTTTGCCTGCATCGCCCATGTCATTCAATTCAAATAACATTAGTGTGTCAGGCTCCTCGGTTATTGATGGATCCTGCGTAGTGCAGCAAAATTCTCACCAGGACCAAAATATCCAACACGTGCAGCAACATACACATCAAGGTGCTTCACATGCCACATCTTTACCAACATCACAAATAGGCCAAGATAATAGTATAGCCTACTGGAGAAAGTTTGTAACAGAGTATTACTCTCCTCGTGCGAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGCCACCACGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATAATAGTATAGCCTACTGGAGAAAGTTTGTAACAGAGTATTACTCTCCTCGTGCGAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGCCACCACGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATGCATGGCAGTGCGACATCTGTGGTTCCAAATCAGGAAGGGGCTTTGAGGCTACATTTGAAGTACTCCCGAGACTCAGTGAGATCAAATTTGGAAGTGGAGTTATTGATGAGTTTTTAATTCTGGAACGTCCTCAAGAAAGGAGATTATCTTCCGGAATTATGCTGTTAGAATATGCAAAAGCATTTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGTCAGCTTCGTGTAATATTCACGCAAGACTTGAAGATTTTGTCTTGGGAATTTTGTGCACGGCGTCATGAAGAACTTCTTCCACGTAGGTTGGTTGCATCTCAGGTGAATCAGCTGGTACTGGTTGCCCAGAAATGCCAAAGCACAATAGCTGAAAGTGGGCCTGATGGTGTTTCTCAGAAAGATTTGCAGACGAATAGCAATATGGTGCTGGCAGCTGGTCGTCAGCTTGCAAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCCCTAAAAGATACGTGAGGTGTTTGCAGATATCGGAGGTTGTCAACAGTATGAAAGATCTTATTGGTTTCTGCCGGGATCAAAAAGTTGGGCCTATTGAGGGCTTGAAAAATTATCCTAGACATGCCACTGCAGCCAAGCTCAAGATGCAAAAGATGCAGGAGATGGAACAGTTAGCAAGTATTCAAGGTCTTCCCACAACAGTAAATAAGCTGATGGCAATGCATCCTGAACATGATAACCATGGGATTAATAACCATCAGATGATTGGTCGAGGAGGTTTGAGTGGTTCGGCACAAGCTGCTTTGGCAATGACTACGTACCAGAATATCCTCATGAGACAAAGCTCTATGAACTCCAATCCCAGCCCACATCAACAGGAGGCCTTGTCTTCTTTCAATAATTCCAACTATAATCCATCCCCTACACTCCAGGGGAATGCATTCTTGATGCCTGGGTCCATACAGAACTCTGTTGGTAGCTTTTCAAGCGCCCAGCAAACCTTGCAAAAGCAATCGCAGCAGCTGCAACAGCATCCACCAAATGCTGGCTCCTTGGTCCAACAAAATTATCCTCAGACGATTCAAGGCAGCCAGGCCCTACAGCAACAGATGATCCAGGAGCTACTGCAGATGTCAAGTAACAGTAAGAGTGGCGGTTTGCAACAGCCACCCCTTACCGGACCAAATGCAAACAGAAGTTTGACAAGAAGGGGTACGGGTTTTGTGGGAAACACCTCAGTTGCAGCTGTGGCATCTGGAAATCTGCCTGGGAGCAATGTCCCTTGCCCTGGTCCGAGTAGAAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAGTCCTCTGCTGGTAATAGTGGGTTCAATCAAAAGGCTTCTGATTTTCCGGAAGACCTTCATCTGCCAGAAAGTTTGGTTGAAGATATAGGCCAAGATTTCCCTGAAAACGGGTTCCTTAACAATGACCTTGATGATGATTTGGGTTATGTCTGGAAGGCTTGA 2268 45.41 MASSRLAGGLAQSPSSSGIFYQGEGQSPAIVNSHLGQSFANSSNSIPGTGCSDFGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSHQDQNIQHVQQHTHQGASHATSLPTSQIGQDNSIAYWRKFVTEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDNSIAYWRKFVTEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDEFLILERPQERRLSSGIMLLEYAKAFQESVYEQLRVVREGQLRVIFTQDLKILSWEFCARRHEELLPRRLVASQVNQLVLVAQKCQSTIAESGPDGVSQKDLQTNSNMVLAAGRQLAKSLELQLLNDLGFPKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLKMQKMQEMEQLASIQGLPTTVNKLMAMHPEHDNHGINNHQMIGRGGLSGSAQAALAMTTYQNILMRQSSMNSNPSPHQQEALSSFNNSNYNPSPTLQGNAFLMPGSIQNSVGSFSSAQQTLQKQSQQLQQHPPNAGSLVQQNYPQTIQGSQALQQQMIQELLQMSSNSKSGGLQQPPLTGPNANRSLTRRGTGFVGNTSVAAVASGNLPGSNVPCPGPSRSNSFKAASNSESSAGNSGFNQKASDFPEDLHLPESLVEDIGQDFPENGFLNNDLDDDLGYVWKA 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 660969 669573 - Cp4.1LG14g05860.1 Cpe14g00123 480507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00123 755 PANTHER LIM DOMAIN-BINDING PROTEIN 166 214 IPR029005 -
Cpe14g00123 755 MobiDBLite consensus disorder prediction 678 714 - -
Cpe14g00123 755 Pfam LIM-domain binding protein 212 460 IPR029005 -
Cpe14g00123 755 Pfam LIM-domain binding protein 165 196 IPR029005 -
Cpe14g00123 755 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 166 214 - -
Cpe14g00123 755 MobiDBLite consensus disorder prediction 539 611 - -
Cpe14g00123 755 MobiDBLite consensus disorder prediction 638 663 - -
Cpe14g00123 755 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 213 748 - -
Cpe14g00123 755 MobiDBLite consensus disorder prediction 678 727 - -
Cpe14g00123 755 MobiDBLite consensus disorder prediction 143 164 - -
Cpe14g00123 755 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Cpe14g00123 755 PANTHER LIM DOMAIN-BINDING PROTEIN 213 748 IPR029005 -
Cpe14g00123 755 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00106 Cpe14g00123 CCT
Cpe09g00106 Cpe14g00123 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00678 Cpe-Chr5:4134053 Cpe14g00123 Cpe-Chr14:660969 5.30E-54 dispersed
Cpe13g00659 Cpe-Chr13:6223255 Cpe14g00123 Cpe-Chr14:660969 1.93E-100 dispersed
Cpe14g00123 Cpe-Chr14:660969 Cpe09g00106 Cpe-Chr9:607677 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00123 - - csv:105434391 882.863