Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00219 ATGTTGGGGATGTTGCCTTCTTCGTCTTCTCTGTGGATCATTTTGACGCTCGGTTTTGTTTCGCTGCTCTCTGCTAATACCGAAGGGGATGCTTTGAATGCATTGAAGTCAAATTTACAAGATCCTAACGGTGTACTGCAGAGTTGGGATCCTACGCTTGTTAATCCCTGCACATGGTTCCATGTTACCTGTGACAGTGATAATAGTGTCACTCGAGTTGATCTTGGAAATGCAAATCTATCTGGCACGTTAGTTCCACAACTTGGTGATCTTCCGAGTTTGCAATATTTGGAACTATATAGTAACAATATTAGTGGAGAAATTCCGCGAGAAATTGGGCTTTTGACAAACTTGGTGAGCTTGGACCTTTACTTGAACAATTTAACTGGTCAAATACCTGTCACACTTGGGGAGCTTGGAAAACTGCGTTTCCTGCGTCTTAACAACAACAGCTTAACGGGAACCATTCCAATGTCATTAACTAATGTTAAATCCTTGCAAGTCCTGGATCTCTCATACAACCAGCTAACTGGAGATATTCCGGTCAATGGTTCTTTTTCTCTTTTTACCCCTATCAGTTTTGCTCATAATCTTCTTAATGAATCGACTGCACGTACACCACCACCTCCTTTACCTTCTTCACCAAGCCCTTCATCAGCCGAAGAGGATCCGGAAGTTCATCTTGGTCAGCTCAAGAGGTTCTCTCTTCGTGAACTACAAGTTGCAACAGATCATTTTAGCAACAAACATATTCTTGGTAGGGGTGGTTTTGGCAAGGTCTATAAGGGACGGCTGGCTGATGGATCTCTAGTGGCAGTTAAAAGACTTAAAGAGGAACGTTCACAGGGTGGGGAGCTGCAATTCCAAACAGAAGTAGAGATGATCAGTATGGCTGTGCATCGTAATCTGCTCCGCCTACGTGGCTTTTGTATGACACCCACTGAACGGTTGCTGGTCTACCCATATATGGTTAATGGAAGTGTAGCATCGTGTTTACGAGGAAAATCTTCTGAAAAGACCGATGTTTTTGGGTATGGGGTCATGCTTCTTGAACTCATAACTGGACAGAGAGCCTTCGATCTTGCCCGGCTTGCAAATGATGATGATGTCATGCTTCTTGATTGGGTGAAAGGACTTCTGAAAGACAAGAGGTTGGAAACACTAGTTGATCCCGACCTTGCGGGAAAATATCCCGACGACGAAGTCGAGCAGCTTATACAAGTTGCATTGTTGTGCACACAAGGAACTCCTACAGAGCGGCCTAAGATGTCAGAGGTCGTACGGATGCTCGAGGGCGATGGTTTAGCTGAAAGATGGGAAGAATGGCAGAAAGAGGAGCGGTTTCATCAAGATGATTAG 1359 44.44 MLGMLPSSSSLWIILTLGFVSLLSANTEGDALNALKSNLQDPNGVLQSWDPTLVNPCTWFHVTCDSDNSVTRVDLGNANLSGTLVPQLGDLPSLQYLELYSNNISGEIPREIGLLTNLVSLDLYLNNLTGQIPVTLGELGKLRFLRLNNNSLTGTIPMSLTNVKSLQVLDLSYNQLTGDIPVNGSFSLFTPISFAHNLLNESTARTPPPPLPSSPSPSSAEEDPEVHLGQLKRFSLRELQVATDHFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERSQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMVNGSVASCLRGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDPDLAGKYPDDEVEQLIQVALLCTQGTPTERPKMSEVVRMLEGDGLAERWEEWQKEERFHQDD 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1241039 1247543 - Cp4.1LG14g05010.1 Cpe14g00219 480603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00219 452 SUPERFAMILY L domain-like 27 202 - -
Cpe14g00219 452 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Cpe14g00219 452 PANTHER BNAA08G11770D PROTEIN 220 334 IPR031048 GO:0004675|GO:0005102|GO:0006468
Cpe14g00219 452 ProSiteProfiles Protein kinase domain profile. 246 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00219 452 MobiDBLite consensus disorder prediction 201 226 - -
Cpe14g00219 452 ProSitePatterns Protein kinases ATP-binding region signature. 252 274 IPR017441 GO:0005524
Cpe14g00219 452 Gene3D Transferase(Phosphotransferase) domain 1 318 433 - -
Cpe14g00219 452 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Cpe14g00219 452 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 218 - -
Cpe14g00219 452 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 334 451 - -
Cpe14g00219 452 PANTHER BNAA08G11770D PROTEIN 7 218 IPR031048 GO:0004675|GO:0005102|GO:0006468
Cpe14g00219 452 PANTHER BNAA08G11770D PROTEIN 334 451 IPR031048 GO:0004675|GO:0005102|GO:0006468
Cpe14g00219 452 Gene3D Phosphorylase Kinase; domain 1 217 317 - -
Cpe14g00219 452 Pfam Leucine Rich Repeat 165 181 IPR001611 GO:0005515
Cpe14g00219 452 SUPERFAMILY Protein kinase-like (PK-like) 230 432 IPR011009 -
Cpe14g00219 452 Gene3D Ribonuclease Inhibitor 24 205 IPR032675 -
Cpe14g00219 452 Pfam Protein kinase domain 247 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00219 452 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 220 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00958 Cpe-Chr6:8196848 Cpe14g00219 Cpe-Chr14:1241039 1.01E-171 dispersed
Cpe14g00219 Cpe-Chr14:1241039 Cpe01g01385 Cpe-Chr1:8342384 2.28E-112 dispersed
Cpe17g00935 Cpe-Chr17:7205562 Cpe14g00219 Cpe-Chr14:1241039 6.73E-49 dispersed
Cpe01g00346 Cpe-Chr1:1971042 Cpe14g00219 Cpe-Chr14:1241039 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62824 PF00069 Pkinase 1.90E-13 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00219 K13416 - csv:101216389 562.377