Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00220 ATGGCAGTGCAGTCGAGAATGATGAAGCTGCAAACATATGCGGGGATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTCTACCCAGCACTGGTCTATTTGTCAACTTCCAAGATAAATCTAGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAGAAAATATTTCTCGGTTCTCTTAGAGAAGCAGAGGTTGAGAGGCTCAACGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATAACTATTTTCCGGCAAGATTTTTCTGTTTCATTCCTTGGTATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATAGTTTCCTTCTTAGGCTTCCTCTTTGTTCTAGATAGTCTGTTTTTTTATAATTCGATAGAATCTCTGATACAGACAAGGAAGGCCTCGGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCAACAACGGCTGTGTCAACGTTTGTAAAATATATTTTCTACGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCCGTCTATACATTTTACTTGGAACTTATCCGAGACTTACTTCACTTGTCAATGTACCTGTGTTTCTTTCTTGTGATTTTCATGACCTATGGTGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTACAGAAAGATTACTTCAAACATGAATGATCGATTTCCCGATGCAACGCCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATCTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGATCCTGGTTGGAGCGACAACATACTTGCCCAACCTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGCCGGTCATCATGGACCACAATCTGATGCTAACCAACAAGGAGCAGGAACCACAAGTTCATCCGCGCAAGGTACGAGTGATACAGGTGTTGCTAATGATAATTTGAGCCATCATCAGGCTAGAGTCCGAGCTGCTGTGGCTGCAGCTTCTGTATATGAGAAATCATATGTTTATCCTTGTGCGAGCACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTGAAAGACCTTTGCCTGACTCCAATAACATAGAACCAAATGGACGTCCACAACAATTTTCTTTTACTGGCGGCCCTTCCAACTTGTCCTTCACTCAATTTCCCCAGAATCTTTTTGTTCCTTTTCAGCCACGAGAGGATACTGGAAACAGTACGGACGGATTGGGCAGTAGTCAAAATGTATCAGGCTTACATCTTGAAGCTCAACAAAGATTTCTCCAGCAACAGATTGAGATCCTACAGAATCAGCTGCAACATCTCCGTAAACCAGATGTTGAGGAAAGCTCAGGAGCAGGTGAGGCAGATAAGAAAGGGAAAAGTGTAGCATTCTCGTTGTCGCCATCGCCGTCGTCATCTGATTCTCGATGA 1638 43.16 MAVQSRMMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQQGAGTTSSSAQGTSDTGVANDNLSHHQARVRAAVAAASVYEKSYVYPCASTLVWSPGYAVVPQVERPLPDSNNIEPNGRPQQFSFTGGPSNLSFTQFPQNLFVPFQPREDTGNSTDGLGSSQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPDVEESSGAGEADKKGKSVAFSLSPSPSSSDSR 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1248225 1253243 - Cp4.1LG14g05000.1 Cpe14g00220 480604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00220 545 SUPERFAMILY RING/U-box 278 342 - -
Cpe14g00220 545 MobiDBLite consensus disorder prediction 343 380 - -
Cpe14g00220 545 MobiDBLite consensus disorder prediction 349 380 - -
Cpe14g00220 545 CDD RING-H2_synoviolin 295 336 - -
Cpe14g00220 545 MobiDBLite consensus disorder prediction 510 524 - -
Cpe14g00220 545 MobiDBLite consensus disorder prediction 434 448 - -
Cpe14g00220 545 PANTHER - 7 449 - -
Cpe14g00220 545 MobiDBLite consensus disorder prediction 429 448 - -
Cpe14g00220 545 Pfam Ring finger domain 297 336 IPR001841 -
Cpe14g00220 545 SMART ring_2 298 335 IPR001841 -
Cpe14g00220 545 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 342 IPR013083 -
Cpe14g00220 545 MobiDBLite consensus disorder prediction 510 545 - -
Cpe14g00220 545 ProSiteProfiles Zinc finger RING-type profile. 298 336 IPR001841 -
Cpe14g00220 545 PANTHER RING ZINC FINGER PROTEIN 7 449 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00668 Cpe-Chr5:4057495 Cpe14g00220 Cpe-Chr14:1248225 8.23E-20 dispersed
Cpe14g00220 Cpe-Chr14:1248225 Cpe19g00170 Cpe-Chr19:1381119 9.91E-11 dispersed
Cpe14g00220 Cpe-Chr14:1248225 Cpe01g00346 Cpe-Chr1:1971042 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00220 K10601 - csv:101215351 939.102