Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00242 ATGACGATGAGGTTGTTAGGCCTTTGCCCTAACAATTCCTTTGCTGCTCCTCTGCTCTCCTTCGTCTCCAATTCGCATTATCGTCACTGTCCTCGCCTCTTCCCCGTCTCTCGTGTTTCCAACCATTTCTGCGTATCAGGGGGAAAAGGTTTGGTGTTAGCAGCGCAGTTCGGCTATAAGAGCGATAGTCAGAGTGAGTTCCAACGAAAGGACTTGATGGCTGGAGAAAAGGAAATTCCAGGAATAAACAAAACCCCTTATCCACCTATTGAGCCATACAGTACTGGTCTTTTGAAAGTGTCGGATCTTCATACTATTTACTGGGAGCAATCTGGGAATCCCGCCGGTCATCCAGTGGTCTTTCTACATGGGGGACCAGGGGGAGGAACTGCTCCAGGCAATAGAAGATTCTTTGACCCAGATTTTTATAGAATTATCTTGTTTGATCAGCGAGGTGCAGGGAAAAGTACCCCACATGCTTGCTTGGAGGACAATACCACGTGGGACCTCATTGATGACATTGAGAAGCTAAGGGAACACCTGAAAATTCCAGAATGGCAGGTCTTTGGAGGTTCCTGGGGTAGTACGTTGGCTCTTGCTTATAGTCAAACTCATCCTGAAAAGGTTACGGGATTAGTTCTTAGAGGGATCTTTCTTCTGCGGAAAAAAGAAATTGATTGGTTTTATGAAGGTGGTGCAGCTGCTATATATCCTGATGCTTGGGAGACTTTTAGAGATCTTATTCCCGAAAGTGAGAGAGGATGTTTTGTTGATGCTTATTGTAAGAGATTAAATTCAAGTGATATGGAAACCCAATATGCAGCTGCAAGAGCGTGGACCAAATGGGAAATGATGACTGCTCATCTTTTGCCAAATGAGGAAAACATTAAAAGAGGGGAAGATGATAAGTTTTCATTGGCATTTGCAAGGATCGAAAACCATTACTTCGTAAATAAGGGGTTTTTCCCTTCTGATTCCTTTCTGCTAGATAATATTGACAAGATACGACATATCAATGCTGTAATTGTACAGGGAAGATATGACGTTTGCTGCCCAATGATGTCGGCTTGGGATCTTCATAAAGTGTGGCCCGAAGCTGAATTAAAGATCATTCCTGACGCAGGTCATTCTGCTAATGAGCCTGGAGTAGCTGCTGAGCTCGTGGCTGCGAACGAGAAGCTGAAGAACATCCTGCAGAAGAATGGACCATAA 1212 44.31 MTMRLLGLCPNNSFAAPLLSFVSNSHYRHCPRLFPVSRVSNHFCVSGGKGLVLAAQFGYKSDSQSEFQRKDLMAGEKEIPGINKTPYPPIEPYSTGLLKVSDLHTIYWEQSGNPAGHPVVFLHGGPGGGTAPGNRRFFDPDFYRIILFDQRGAGKSTPHACLEDNTTWDLIDDIEKLREHLKIPEWQVFGGSWGSTLALAYSQTHPEKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWETFRDLIPESERGCFVDAYCKRLNSSDMETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDKFSLAFARIENHYFVNKGFFPSDSFLLDNIDKIRHINAVIVQGRYDVCCPMMSAWDLHKVWPEAELKIIPDAGHSANEPGVAAELVAANEKLKNILQKNGP 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1402142 1409023 + Cp4.1LG14g04780.1 Cpe14g00242 480626

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00242 403 Pfam alpha/beta hydrolase fold 118 380 IPR000073 -
Cpe14g00242 403 PRINTS Alpha/beta hydrolase fold signature 142 157 IPR000073 -
Cpe14g00242 403 PRINTS Alpha/beta hydrolase fold signature 188 201 IPR000073 -
Cpe14g00242 403 PRINTS Alpha/beta hydrolase fold signature 202 215 IPR000073 -
Cpe14g00242 403 Gene3D alpha/beta hydrolase 84 395 IPR029058 -
Cpe14g00242 403 PRINTS Prolyl aminopeptidase (S33) family signature 119 127 IPR002410 GO:0006508|GO:0008233
Cpe14g00242 403 PRINTS Prolyl aminopeptidase (S33) family signature 145 156 IPR002410 GO:0006508|GO:0008233
Cpe14g00242 403 PRINTS Prolyl aminopeptidase (S33) family signature 188 202 IPR002410 GO:0006508|GO:0008233
Cpe14g00242 403 PANTHER PROLINE IMINOPEPTIDASE 68 397 IPR005944 GO:0004177|GO:0005737|GO:0006508
Cpe14g00242 403 SUPERFAMILY alpha/beta-Hydrolases 82 380 IPR029058 -
Cpe14g00242 403 TIGRFAM pro_imino_pep_1: prolyl aminopeptidase 91 394 IPR005944 GO:0004177|GO:0005737|GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00242 K01259 pip; proline iminopeptidase [EC:3.4.11.5] - csv:101217220 746.503
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g821 . Blo03g00047 Bda06g01143 . Bpe07g00301 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1060 Cone10ag1075 . . . . . . . . . . . . . . Cmo16g00310 . . . . Cpe14g00242 . Bhi11g01083 . . . . . . . . . . . . . Lsi03g00992 . . Cme07g02225
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007769 1 5 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00242 Cpe_Chr14 FPKM 2.091941 2.860167 330.37851 343.435181 205.615402 222.91362 190.51239 4008.031494 4098.111328 3504.953125