Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00250 ATGGCGCTGCCGTCTAACAGATCGTCTTCACCGTCGATGGTGACCGGAAGAACAGGCCCTATTTCTAGAAATTCCGAAATCGGCAACCCTGTCTACCGGAGCTTCTCCAGTAATCCGTTTTCGAAGCCGTCGATCGCCACCAGTTTGAAAAGCTTGAATCCAATCACTCCGGCGAATAGTCCCTCCGATTATCCGCCACAAAGGAATTCTGTGAGCAGAGAAATTTTATTTACTTCTCGAGACAATGAGGATAAAGAAAATGGGAAAGATCAGAGTCCGAAACTCACCCGAGTCCGTTCGCCGACTGTCGGAAAATCGATGAAGAATTTCATGTCGTCTACAATTTCCGCCGCCTCCAAGATTGCCGTCTCTCCGAAGAAGAAGATTCTGGGCGATCGGAACGAGCCAGTTCGGTCGTCTCTTTCATTTTCCGGCATGAAAAGCTCTTCACTCAACTCGGTGAATCCAACTCCTGAGGCATCAATGGCATTTGAATCCGATACGAACCCTCCAATGCCTCTGATTTCATATCCTAAATCAACAAAAACAGTGAGATTCGGTGGTGTTGAGGTAATTTCTGGTTCGTACGAGGATTCAGAATCGACTTACCGATATGATTTGAACCCGGAGTTGGTGGCAGCTGTAACCGATTCGAAGTCTGGAATTGTTCCGATTACTAAATCTGCCATTGCAGAAGGATCTTCCAAATCTTCTAAAACTGTGACATTCGGTGGTTTTGAGGTTATTTCTGATTTCTGTGACGATTCGGAATCCACATACCGACATGGACACCATCCGAACCCAGAAGCTGTAACAGTGGCTGTTGAGGCCAACGCAGAGCCTGAAATCGGTCCGATTTCAGATTCCGACATTGCAGCTGTAACTCCCGAAGCTTCAAAGATTATGAGATTTTCTGATTTCGAAGCTGTCTCGAACAACGCTTTAGAGTCTTCGGTTAACAGTAATTTAACTGAAGAAGTGGATTCTGTTAATCTTGACCCAAGTTTTAACATCAGTCCAGTTTCTTCTCCAATGATAGCACCTATAATCACTCCTTATGATCCTAAAACTAATTATCTGTCGCCAAGGCCACAGTTCCTCCATTACAACCCAAACCGAAGAATCAATCGACCAGATGGTAGATTTGAGGAACTCTTTTCCTCTTCGGAGGAGACTGACTGTGAAGATCCACAGAAGGAATCTGATGAAGTTTCTTCCAATGAATCGCAGATGAAAGAAGAAGAAAAAGAAGAAGAAGAGGTTAATGTTTCTATACAAGGCCCCACGGAAGTTAAAAAGTCGTCGAAGCCTCTGTTGTCTAGGATATTCAAGATCAGTTCTCTGCTTTTGATTTTGTTTACTGCTTGCTTGTCGATTTGTGTTGTGAATGTCCATGATCCAACTATCTTCGAAAGATCAACCTTGTTAACAATGGGGGATCAGTCTGAGATTTTCGAGTCTGCTAAAACGAATTTCAATGTGTTGGTTGGGAAACTTGAGATTTGGCATGCGAATTCCATCTCTTTTATTTCTGATGTGGTTTTCAACTTCAGAGGAGGGCCGCCATTGATACATCTGAACCAAACTGAGTTTTTCTACGGGGATGTCAATAAGGATGAACAGTGTCTTGTATTATCTCATCAGAACGTGTGGGAAGAAGAAAACAATTTGATTAATGCAATGGAAGCCATGAAGGAGAGAGTAATTGTTGATACTTTTGAAGAGCCTATTGACAGAGAAGGTCAGAATAAAGAGGGACAAGAACAAGAAGAAGATGCACAAGAGGTTGAAGCCATAAAGGTGAGAGAAATTGGCATCGAAACCTTTGAAAGAGAATCTCACAATGAAGAAGTAGAAGAAGAATCGTTTCAAGAGATTGAGGCCAGAACCAATGATTCAGCAGACATTGAAGAAGAGAATAACGAGGCTTCTGAAGAATCATTACAAGAAATCATTGAACATATTGAGGGAGAAGGTCAGAATATAGAGGGACAAGAACAGCAAGAAGAAGCACAAGATACCGAAGCCATGAAGGTGAGAGAAATTGGAATCGAAACTGTTGAAAGAGAATCTCAGAACGAAGAAGTAGAAGAAGAACCGTTTCAAAAAGACAGCGAAGAAGAGAATGACGAGGCTTCTGAAGAATCATTACTAGAAATCGTTGAAGAAGAATACGTTCAAGAGAAAACCGTAGAGAATTTCAAAGCTTCTTCATCGTCTGATTTTAAATTACATGATGAAATTGAAAAAGCAGCAGCAACAGGGGAAACACAGGAAGAAACGAACACAGAATTTCAATACCAGTCACCTCCAGTCTCTTCTCCTCCATCTGAACATCAATCTGATGTTGAAGAAGAAAATGGCGGCAAAATCGTCGATCTCATCAGAACAGCCACCGGAATATCTCGTGATTTCACACAGAACACGGCTGCAATAATATCTGCAATACTGCTAGGTTTATTTCTTATTATACCTGCAGGACTGATTTATGCAAGGAAATCAAGCTCAAGACGAACAACATCCACGGCGGCCATTGCTGAAGAGCAGCAAGAGGAGCCATTGCTGAAAGATAAGAAGACGAACCAGAGTCTGGTGGAAGAGGAAGAAGAAGAAGCACTGGATGATGATGATGAAGATGATATGGCTGGAGAATTTTGCTCTTCTGAAACGAGTAGTTTTTTCCAGTACAGCAGCGTGAGAGAAGGAGAAACAGAAGCAGCGAAAAGATCGAGTGAGTTTCAAAGCCATAGCCATGTGAGGAGGGAGAATTCAAGAAGAGAATCCATCGCTGAAGCAGCGACGAGATCGAGTGAAGTTCAGAGCCATAGCCATGGGAGGAGGAAGATTAGGATGGAGAATTCACGAAGAGAATCCATGGCTTCTTCTTCTTTGGATGATTACTCAGTGTCCTCTTCGGCTTCTCCATCTTATGGGCGTTTCACAACTTATGAGAAGATCCCAATCAAGCATAAAAATGGAGACGAAGAGATTGTGACTCCCGTCAGGCGCTCTAGTAGGATTAGAAATCGACACAATAATAGTTGA 3045 42.63 MALPSNRSSSPSMVTGRTGPISRNSEIGNPVYRSFSSNPFSKPSIATSLKSLNPITPANSPSDYPPQRNSVSREILFTSRDNEDKENGKDQSPKLTRVRSPTVGKSMKNFMSSTISAASKIAVSPKKKILGDRNEPVRSSLSFSGMKSSSLNSVNPTPEASMAFESDTNPPMPLISYPKSTKTVRFGGVEVISGSYEDSESTYRYDLNPELVAAVTDSKSGIVPITKSAIAEGSSKSSKTVTFGGFEVISDFCDDSESTYRHGHHPNPEAVTVAVEANAEPEIGPISDSDIAAVTPEASKIMRFSDFEAVSNNALESSVNSNLTEEVDSVNLDPSFNISPVSSPMIAPIITPYDPKTNYLSPRPQFLHYNPNRRINRPDGRFEELFSSSEETDCEDPQKESDEVSSNESQMKEEEKEEEEVNVSIQGPTEVKKSSKPLLSRIFKISSLLLILFTACLSICVVNVHDPTIFERSTLLTMGDQSEIFESAKTNFNVLVGKLEIWHANSISFISDVVFNFRGGPPLIHLNQTEFFYGDVNKDEQCLVLSHQNVWEEENNLINAMEAMKERVIVDTFEEPIDREGQNKEGQEQEEDAQEVEAIKVREIGIETFERESHNEEVEEESFQEIEARTNDSADIEEENNEASEESLQEIIEHIEGEGQNIEGQEQQEEAQDTEAMKVREIGIETVERESQNEEVEEEPFQKDSEEENDEASEESLLEIVEEEYVQEKTVENFKASSSSDFKLHDEIEKAAATGETQEETNTEFQYQSPPVSSPPSEHQSDVEEENGGKIVDLIRTATGISRDFTQNTAAIISAILLGLFLIIPAGLIYARKSSSRRTTSTAAIAEEQQEEPLLKDKKTNQSLVEEEEEEALDDDDEDDMAGEFCSSETSSFFQYSSVREGETEAAKRSSEFQSHSHVRRENSRRESIAEAATRSSEVQSHSHGRRKIRMENSRRESMASSSLDDYSVSSSASPSYGRFTTYEKIPIKHKNGDEEIVTPVRRSSRIRNRHNNS 1014
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1449787 1453963 + Cp4.1LG14g04750.1 Cpe14g00250 480634

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 956 979 - -
Cpe14g00250 1014 PANTHER TRANSMEMBRANE PROTEIN 1 1011 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 1 101 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 137 159 - -
Cpe14g00250 1014 Coils Coil 626 646 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 850 866 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 739 754 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 835 884 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 1 76 - -
Cpe14g00250 1014 PANTHER TRANSMEMBRANE PROTEIN 1 1011 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 691 719 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 755 778 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 575 596 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 609 636 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 731 788 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 940 955 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 905 932 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 609 719 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 132 159 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 386 428 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 386 423 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 905 1014 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 984 1003 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 77 93 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 671 690 - -
Cpe14g00250 1014 MobiDBLite consensus disorder prediction 867 884 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00250 - - - cmax:111482876 1550.8
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe01g00385 Cpe14g00250 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00385 Cpe-Chr1:2220566 Cpe14g00250 Cpe-Chr14:1449787 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g776 Blo02g00915 . . . . . . Bma12g00305 . . . . . . . . . . . . . . . . Cla10g00958 Cam10g0981 Cec10g1012 . Clacu10g1003 Cmu10g1786 Cre10g1159 . . Cone3ag1049 Cone10ag1065 . . . . . . . . . . . . Sed13g0417 Cmo04g00459 Cmo16g00320 . . . . Cpe14g00250 Cpe01g00385 Bhi11g01098 Tan01g0601 Cmetu07g1160 . Hepe07g0391 Mch10g0405 . . . . . . . . Lsi03g01003 . . Cme07g02214
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005958 3 1 1 1 1 1 2 1 1 0 1 1 2 1 1 2 1 2 2 1 1 1 1 2 1 1 1 1 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00250 Cpe_Chr14 FPKM 32.736111 32.816032 24.751207 29.15616 11.697037 11.888186 11.270801 21.587378 23.214594 22.076746