Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00269 ATGGAACCTATAGGACCCATTTCAGAAAGGGAATGGATATCTCTCACTGGAGCTTACACAGCTGAGGAGTCTGATTTCATGGCTAATTTGCTCAACAACTATTGTCTTCCAAACGAGCTCAATCCCGGTTCGAGCTCGGCCGTCCCGTCTGCTTGTTTGGCCATGGCACCCATGGATGAACCTTCTTACTATAGTAATCCTTATTACACCTTGAATGAGAATGATTCTCACCCTCTTTGGTTGCCTAATAATGGTGCCTCTTTGTCCTTGGATTTCTCGATGGAGGATGTTCGGAATGGCGACCGATTGGACGATTGCGGTTCGAGTCGAAAAACAAGGCAATGCAGGCTGCAACAATTCCCTGCTGGAAGCTCACAGCCCGAAAAGAGAGCTGAGATCACGGTGGAAGTAGCTACGAAGGACGATAAAGTTGCACCGACACCAAGCTCGAAGATTGGTTCGGCTAGCTGCAATGAAGAGGAGGATCACATTGTTAGTCCAAATGGGCTGTGCACAAGCAGCTTCAGCTCAGAAGATGACTGTAATGGTGGGATCACTTCCAGCTCAACCCTGAGCTCAAGTGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGAAAAGGAGAGAAAGAATCAATGAAAGGTTGAGAATGTTACAAAGCCTCGTCCCCAACGGCACGAAGGTTGATATCAGTACAATGCTTGAAGAAGCAGTTGAGTATGTGAAGTTCTTGCAGCTTCAAATCAAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGCTCATGAAACAAGACAATAATGCATCACAATAG 879 46.42 MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSACLAMAPMDEPSYYSNPYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDCGSSRKTRQCRLQQFPAGSSQPEKRAEITVEVATKDDKVAPTPSSKIGSASCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNNASQ 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1556221 1557626 - Cp4.1LG14g04550.1 Cpe14g00269 480653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00269 292 MobiDBLite consensus disorder prediction 182 211 - -
Cpe14g00269 292 Gene3D - 203 260 IPR036638 GO:0046983
Cpe14g00269 292 SMART finulus 209 258 IPR011598 GO:0046983
Cpe14g00269 292 MobiDBLite consensus disorder prediction 182 207 - -
Cpe14g00269 292 PANTHER TRANSCRIPTION FACTOR BHLH84-LIKE 117 287 - -
Cpe14g00269 292 Pfam Helix-loop-helix DNA-binding domain 213 253 IPR011598 GO:0046983
Cpe14g00269 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 252 IPR011598 GO:0046983
Cpe14g00269 292 MobiDBLite consensus disorder prediction 139 161 - -
Cpe14g00269 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 203 269 IPR036638 GO:0046983
Cpe14g00269 292 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 117 287 - -
Cpe14g00269 292 CDD bHLH_AtIND_like 204 266 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00326 Cpe14g00269 CCT
Cpe14g00269 Cpe15g00442 CCT
Cpe04g00326 Cpe14g00269 ECH
Cpe14g00269 Cpe15g00442 ECH
Cpe01g00404 Cpe14g00269 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00195 Cpe-Chr6:1046524 Cpe14g00269 Cpe-Chr14:1556221 2.75E-52 dispersed
Cpe07g00514 Cpe-Chr7:3391186 Cpe14g00269 Cpe-Chr14:1556221 1.22E-29 dispersed
Cpe14g00269 Cpe-Chr14:1556221 Cpe15g00442 Cpe-Chr15:5543153 2.33E-42 dispersed
Cpe15g00441 Cpe-Chr15:5540508 Cpe14g00269 Cpe-Chr14:1556221 3.87E-19 dispersed
Cpe01g00404 Cpe-Chr1:2341237 Cpe14g00269 Cpe-Chr14:1556221 9.38E-120 wgd
Cpe11g00124 Cpe-Chr11:681069 Cpe14g00269 Cpe-Chr14:1556221 8.66E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50490 PF00010 HLH 2.90E-09 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00269 - - cpep:111810674 556.984