Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00293 ATGTGGGCCAAAGTGTTTACAGCTCTCGGATGGAGTATTGCAGCACCAGCAGAATCCCTTGATTGGCTTCATTTGATACTGATAGATCATCCTTTCAAGTCTATAAAGAGCACCTTGTGGAATGGATATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAGTATGATATCATGGCACCAGTGCAGGCTAAGACTGAGAATGCCCTTGCAGGTGCTTTCATTTCAAATTGTGATGCTCGTAACTTCCGCTTGGAAGCTCTTGTGGCTCTTGAAAAACTGAACGTCACAATCGATTCATATGGTGCTTGCCACAGAAATCGTGATGGAAGCACAGTGGACAAACTAGAGACTCTAAAGCACTACAGGTTCAGCTTGGCTTTTGAGAATTCCAACGAGGAAGATTATGTGACTGAAAAATATTTCCAATCTCTAGTTGCTGGAGCCGTTCCAGTGGTTATTGGAGCTCCAAACATTCAAGAGTTTGCTCCTTCACCTGCTTCGCTTTTGCATATCAGGAAGCTTTCAGATGTTGAGTCAGTTGCCAACTCTATGAAATACCTTGCAGCAAATCCTGAGGCATTCAACAACTCATTGAGGTGGAAATATGAGGGTCCATCCGACTCTTTCAAGGCACTATTGGATATGGCAGCAGTTCATTCGTCATGTCGCCTTTGCATTCATTTGGCAACTAGTATTCATGAGACAGAAGAAAAGGGTCTAGCGTTTAAAAATCGACCCTGTAAATGCACCAGAGGTCCGGAGACCGTTTATCACTTATATGTGAGGGAAAGAGGAAGGTTTGATTCAGAGTCCATTTTCTTGAGGTCTAGTAATCTGACGGTTGAAGGGCTGGCGTCAGCAGTGGTTTCGAAGTTCAAATCGCTGAAGCACGAACCGATTTGGAAGCAGGAGAGGCCTAAGAGCTTAAAAGGAGGGGACGAATTAAGGTTGTATAAGATATACCCAGTTGGGTTGACACAGAGGCAAGCTTTATATACCTTCAAATTTCAGGGGGACTCTGATCTCAGAACACACGTGGAAGATAACCCGTGTGCCAAATTTGAAGCCATTTTTGTATAG 1110 44.05 MWAKVFTALGWSIAAPAESLDWLHLILIDHPFKSIKSTLWNGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVQAKTENALAGAFISNCDARNFRLEALVALEKLNVTIDSYGACHRNRDGSTVDKLETLKHYRFSLAFENSNEEDYVTEKYFQSLVAGAVPVVIGAPNIQEFAPSPASLLHIRKLSDVESVANSMKYLAANPEAFNNSLRWKYEGPSDSFKALLDMAAVHSSCRLCIHLATSIHETEEKGLAFKNRPCKCTRGPETVYHLYVRERGRFDSESIFLRSSNLTVEGLASAVVSKFKSLKHEPIWKQERPKSLKGGDELRLYKIYPVGLTQRQALYTFKFQGDSDLRTHVEDNPCAKFEAIFV 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1719598 1723955 - Cp4.1LG14g04250.1 Cpe14g00293 480677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00293 369 PANTHER GLYCOPROTEIN 3-ALPHA-L-FUCOSYLTRANSFERASE A 41 346 - -
Cpe14g00293 369 Gene3D - 37 218 IPR038577 -
Cpe14g00293 369 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 41 346 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cpe14g00293 369 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 37 242 - -
Cpe14g00293 369 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 77 243 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02150 Cpe-Chr1:18090933 Cpe14g00293 Cpe-Chr14:1719598 1.02E-14 dispersed
Cpe13g00716 Cpe-Chr13:6625699 Cpe14g00293 Cpe-Chr14:1719598 7.46E-15 dispersed
Cpe14g00293 Cpe-Chr14:1719598 Cpe15g00486 Cpe-Chr15:5844027 0 dispersed
Cpe01g00439 Cpe-Chr1:2526392 Cpe14g00293 Cpe-Chr14:1719598 1.12E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00293 K00753 - csv:101202837 595.504