Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00320 ATGCAGATTCACCTCCTCCACCGCCCCGACACCGTCGAGAAAGACGGCGGTGAGGACAAGAAGGAGGATCGGAAGCACGGAAGCGACGACGATAACGATAGCGATAGCGATTTGCCATCGTCGTTGAGCCTTAGAGAGCTTTCAAAGGTTATACTTCCACCTTTGGGAGTATCGAGCTTTACTGACGATAATAAAGTGAAGCGCCATAAATGGATCATCTCTCCCATGAACTCAAAATACAGGTGGTGGCAGTCGTTCATGGTGGTTTTGGTTGCTTACTCGGTGTGGGTTTACCCAATGGAAGTGGCGTTTATGGACGCGATTCCCAAGCGCCGATTGTTAATTGTAGATAATGTTGTCGATCTCTTCTTCGCCATTGACATCTTCTTCACCTTCTTCGTTGCTTACATTGATCATCGGACTCAGCTTCTCGTTCGCGATTCTAAGAAGATAGCTATTAGGTACCTGTCGACATGGTTCTTGATGGATTTGGCATCAACAATCCCATTTGAATCACTGGCTTATCTGTCCACAGGCAAATATGATATTTGTCTCCCTTTTGCCCTCCTAGGATTGCTCAGGTTCTGGCGACTGCGACGTGTCAAGCAACTTTTTACAAGGCTCGAGAAGGACATTAGATTCAGCTACTTTTGGATTCGATGTGCTAGGCTTCTATTTGTTACTTTGCTCTATGTCCATTGTGCCGCATGCCTCTACTACATGTTGGCTGACCGGTATCCAAATGAAGGAAAGACGTGGATTGGAACAGCGTTTCCAAATTTCAGAGAGACTAGCTTTGGAGTGAGATATGTTTCATCCATGTATTGGTCTATCACCACTATGACCACGGTTGGTTATGGTGATCTTCATGCTGTGAACACGATGGAGATGATCTTTATAATCTTCTACATGCTCTTCAATCTCGGGTTAACCGCTTACTTGATCGCCGAGAGCCTAAACCAACAACACCTGATCGAACAGCTTCCGAAGTCGATTTGCCATAGCATCTGTCAGCAATTGTTTATGCCGACCGTGGAGAAACTCTACCTCTTCAAGGGTGTCTCAAAGGAAACACTTGTGATGCTGGTAGCCGAGATGAAAGCCGAGTATATACCGCCTAAAGAGGACGTGATAGTACATAACGAAAGCCCGGAAGAAGTTTATATCATCGTGTCCGGGGAAATCGAAATTATCGACTGTGAGACGGAGGTGGAACGGATTGTTGGGACATTACACTGTGGCAGTATGTTTGGGGAAGTAGGAGCACTTTGTTGCAAAAACCACAGCTTTACATACAGAACCAAAACTCTTTCACAGCTCTTGAAGCTCAAAACAAGTGTGCTACAAGAAGCTATGCATATCAAACAAGAAGACAGTACAGTCATCGTCAAGAACTTCCTTCAGGAAAGGGAGCTGAGCCACAAAATCACCATAGAAGGTTCGCCCGAAAAAGAGACGACGCCGACTTTGATCGAAGAAAAGGATCAAAGTTTCAACTGGAAACACTCCATTGAGTTAGATTTTAGTAGAGTTAACATATACAAAGGCCATCCAGTAGCCAGAAAACAGGCTTCTTGTGATGATCCTGGAAAGCTCATCAGATTGCCACATTCAATGGAGGAGCTCAAAAGAGTTGCAGGTGAAAAGTTTGGATTTGATGCAACAAATGCTGTTTTGACAAATGAAGAAGGCTCTGAAATTGATTCCATTGATGTGATAAGGGATAATGATAAGCTTTTTTTCTCATAG 1749 44.31 MQIHLLHRPDTVEKDGGEDKKEDRKHGSDDDNDSDSDLPSSLSLRELSKVILPPLGVSSFTDDNKVKRHKWIISPMNSKYRWWQSFMVVLVAYSVWVYPMEVAFMDAIPKRRLLIVDNVVDLFFAIDIFFTFFVAYIDHRTQLLVRDSKKIAIRYLSTWFLMDLASTIPFESLAYLSTGKYDICLPFALLGLLRFWRLRRVKQLFTRLEKDIRFSYFWIRCARLLFVTLLYVHCAACLYYMLADRYPNEGKTWIGTAFPNFRETSFGVRYVSSMYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIAESLNQQHLIEQLPKSICHSICQQLFMPTVEKLYLFKGVSKETLVMLVAEMKAEYIPPKEDVIVHNESPEEVYIIVSGEIEIIDCETEVERIVGTLHCGSMFGEVGALCCKNHSFTYRTKTLSQLLKLKTSVLQEAMHIKQEDSTVIVKNFLQERELSHKITIEGSPEKETTPTLIEEKDQSFNWKHSIELDFSRVNIYKGHPVARKQASCDDPGKLIRLPHSMEELKRVAGEKFGFDATNAVLTNEEGSEIDSIDVIRDNDKLFFS 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1896169 1902207 + Cp4.1LG14g03980.1 Cpe14g00320 480704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00320 582 MobiDBLite consensus disorder prediction 1 40 - -
Cpe14g00320 582 Pfam Ion transport protein 80 316 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe14g00320 582 PANTHER POTASSIUM CHANNEL AKT2/3 46 315 - -
Cpe14g00320 582 Gene3D Jelly Rolls 320 489 IPR014710 -
Cpe14g00320 582 MobiDBLite consensus disorder prediction 7 33 - -
Cpe14g00320 582 SMART cnmp_10 350 467 IPR000595 -
Cpe14g00320 582 CDD CAP_ED 350 453 IPR000595 -
Cpe14g00320 582 SUPERFAMILY Voltage-gated potassium channels 75 316 - -
Cpe14g00320 582 PANTHER POTASSIUM CHANNEL AKT1 505 581 IPR045319 GO:0005249|GO:0006813
Cpe14g00320 582 PANTHER POTASSIUM CHANNEL AKT1 316 477 IPR045319 GO:0005249|GO:0006813
Cpe14g00320 582 PRINTS EAG/ELK/ERG potassium channel family signature 296 307 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe14g00320 582 PRINTS EAG/ELK/ERG potassium channel family signature 270 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe14g00320 582 PRINTS EAG/ELK/ERG potassium channel family signature 117 127 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe14g00320 582 ProSiteProfiles KHA domain profile. 510 582 IPR021789 -
Cpe14g00320 582 Gene3D - 81 319 - -
Cpe14g00320 582 PANTHER POTASSIUM CHANNEL AKT1 46 315 IPR045319 GO:0005249|GO:0006813
Cpe14g00320 582 SUPERFAMILY cAMP-binding domain-like 318 466 IPR018490 -
Cpe14g00320 582 Pfam Cyclic nucleotide-binding domain 373 452 IPR000595 -
Cpe14g00320 582 Pfam KHA, dimerisation domain of potassium ion channel 510 581 IPR021789 -
Cpe14g00320 582 ProSiteProfiles cAMP/cGMP binding motif profile. 350 469 IPR000595 -
Cpe14g00320 582 PANTHER POTASSIUM CHANNEL AKT2/3 505 581 - -
Cpe14g00320 582 PANTHER POTASSIUM CHANNEL AKT2/3 316 477 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00476 Cpe14g00320 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00320 Cpe-Chr14:1896169 Cpe20g00503 Cpe-Chr20:2920730 3.84E-135 dispersed
Cpe01g00476 Cpe-Chr1:2744790 Cpe14g00320 Cpe-Chr14:1896169 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00320 K21867 - csv:101205212 959.903