Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00359 ATGAAGATTCAGTGCAACGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTATCTGATTCTTCGTCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCCAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTTATGGGAAATGGAACGTTCCATACCGGAGATACTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAGCGGATCGTCCAAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACATTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATTTCCGGTTCTTCCGAAAAGGTTCAACATTGCTCACATAATGGTAGATTCTTGAAACGAAGGAGGCAGTTCTAG 891 47.36 MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCSSMPKSHSQVKPTETKVRPLSEREFSLPSPGELSRCLSVQGGSEDFMGNGTFHTGDTVSGGFSQWQMDDLINLTGFNQNYGFLDSGSSKADSGKLGDSDSSPVLRAADIELDDNDECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISGSSEKVQHCSHNGRFLKRRRQF 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2185559 2189928 - Cp4.1LG14g03500.1 Cpe14g00359 480743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00359 296 MobiDBLite consensus disorder prediction 115 129 - -
Cpe14g00359 296 SMART bboxneu5 52 99 IPR000315 GO:0008270
Cpe14g00359 296 SMART bboxneu5 4 47 IPR000315 GO:0008270
Cpe14g00359 296 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Cpe14g00359 296 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 295 - -
Cpe14g00359 296 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Cpe14g00359 296 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 295 - -
Cpe14g00359 296 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
Cpe14g00359 296 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Cpe14g00359 296 Gene3D Classic Zinc Finger 1 92 - -
Cpe14g00359 296 CDD Bbox1_BBX-like 5 47 - -
Cpe14g00359 296 MobiDBLite consensus disorder prediction 113 145 - -
Cpe14g00359 296 CDD Bbox1_BBX-like 56 99 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00595 Cpe14g00359 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00107 Cpe-Chr4:966757 Cpe14g00359 Cpe-Chr14:2185559 1.09E-34 dispersed
Cpe11g00234 Cpe-Chr11:1265779 Cpe14g00359 Cpe-Chr14:2185559 3.53E-36 dispersed
Cpe14g00359 Cpe-Chr14:2185559 Cpe17g01088 Cpe-Chr17:8252826 1.60E-08 dispersed
Cpe01g00595 Cpe-Chr1:3434320 Cpe14g00359 Cpe-Chr14:2185559 1.16E-127 wgd
Cpe01g00595 Cpe-Chr1:3434320 Cpe14g00359 Cpe-Chr14:2185559 1.16E-127 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50498 PF00643 zf-B_box 3.60E-07 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00359 - - bhj:120091143 553.132