Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00389 ATGGCCTTGCAATTGCAAATGAGTTGGCAACCGAGTTTACTGAGTCAGAAGCGCCGGAACGGCCCCCCACTCGGTCTTAAAAACCTAGGCAATACCTGCTACCTCAACAGCGTTCTTCAGTGTCTCACTTATACCCCTCCCCTCGCCAATTTCTGCCTCCGGAACCAACACTCCTCTCTCTGTGATTCGGCTTCCTCCGACAACGAGCGAAAGCGCGAATGTCCATTTTGCATTTTGGAGAGGCGGATAGTGAGGTCTTTGAGTTTGGATCTCACCTTAGATTCGCCTCTCAAGATCCAGAACTGTCTCAGGATCTTCGCCGAGCATTTTCGCTTGGGCCGTCAGGAGGACGCCCACGAGTTCCTTCGTTATGTCATCGACGCTTGCCACAACACCTGCCTCCGCTTGAAGAAGCTGCGTCGAAATGGAAATGGCAACTACAACGGTGGAGGTGCGAGTGGAAGCTCCACGGTGGTGAAGGAAATTTTCGGGGGTGCCTTGCAGAGCCAGGTGAAGTGTTTATCTTGTGGAAACGACTCCAATAAGATTGACGAGATAATGGATATTAGTCTTGATGTTTTGCATAGTAGTTCTCTTAAAGAGGCATTGCACAAGTTCTTTCAACTGGAAGTTTTAGATGGCAATAATAAGTACAAGTGTGACAACTGTAAGAAGTTGGTGGTGGCGAGGAAGCAGATGTCAATACTCCAACCACCTAACATTCTTGTCATCCAATTGAAGAGATTTGATGGCATATTTGGGGGTAAGATTGACAAGGCTATTGCGTGTGACGAGAGTTTGCAGCTTTCAAATTTCATGTGCAAAGGAAGTCAGGATCCACGTCCAGAGTACAAGCTCTTTGGTACCATAGTGCATTCAGGCTTCTCCGCAGAATCTGGACATTATTATGCATACATCAAGGATGCATCAGGTAGATGGTATTGCTGCAATGACTCATTTGTTACAGTTTCAACTCTGCAGGAGGTTTTGTCAGAAAAGGTTTATATTCTCTTTTTCTCTCGTACGAATCAAAGGCCAGTAACTACTAGCACAAATCTTGCTTCCAATGGTGTAAAATCTCATCAATGTAATGGCAGTGATGGATTCAAAATGTCAAAACCTTCTGTTGTAACTAAAACGGCACAGACAAGATCCCATGTTGAGCAATCTTCTCGGAAGGAACTTTCAAGTTCATTTAAGGTAGATAAACCAACTTCCAGTCCACAAGGAAAGTCGTATATGAATGGACATACTAATTCCATGCAATCTCCTTCCACCATTAATGGAAAGATTGTTCTTGAGAAGGATGAATCCATCAAGGAGAATGAGAAAGAGAATATAAACTCGTTGCCTCTGGAAAATGGTGCAAGACATATATCTTCTCTCGGGAATGGAAATATCAGGAAAAATCATGAAGTTCATTGTGATGTCCCTGAGAAGGAACATAAATCTGTGTTAATGAATGGTAATGTAAATGGTGAGAGTATGGGAATGAAAGCAGATAAACATGACCAGTTTAATGGTAAATCTATGAATATCAAGATCACTGCAGGAAGAGGGTCTGATCATGATGAAATTGATAATACAGTCAACTGCCCCTCTGAGATCAAAAGGGCCAAAAGAAGATCAGACTTATGTATCTTGTCTCAACAGGATTCTCAATCTCAGGGAAGAGTTGAAGAACTTAAACAAAATCTCAAGAATGAAACTTCCTCAGTTTTAAGATCATGCGGTTGGTCAGAGGAGGTCTTCAGTTGCATGCGAACAAGGAAGAGATTATGTTTAAGAGAAACTGGCAGGACACCAAGTAGGAATGACTTAAAGTACGTATTACTTTCTAAGTGTACAAACAACTTCATATTCTAG 1866 42.6 MALQLQMSWQPSLLSQKRRNGPPLGLKNLGNTCYLNSVLQCLTYTPPLANFCLRNQHSSLCDSASSDNERKRECPFCILERRIVRSLSLDLTLDSPLKIQNCLRIFAEHFRLGRQEDAHEFLRYVIDACHNTCLRLKKLRRNGNGNYNGGGASGSSTVVKEIFGGALQSQVKCLSCGNDSNKIDEIMDISLDVLHSSSLKEALHKFFQLEVLDGNNKYKCDNCKKLVVARKQMSILQPPNILVIQLKRFDGIFGGKIDKAIACDESLQLSNFMCKGSQDPRPEYKLFGTIVHSGFSAESGHYYAYIKDASGRWYCCNDSFVTVSTLQEVLSEKVYILFFSRTNQRPVTTSTNLASNGVKSHQCNGSDGFKMSKPSVVTKTAQTRSHVEQSSRKELSSSFKVDKPTSSPQGKSYMNGHTNSMQSPSTINGKIVLEKDESIKENEKENINSLPLENGARHISSLGNGNIRKNHEVHCDVPEKEHKSVLMNGNVNGESMGMKADKHDQFNGKSMNIKITAGRGSDHDEIDNTVNCPSEIKRAKRRSDLCILSQQDSQSQGRVEELKQNLKNETSSVLRSCGWSEEVFSCMRTRKRLCLRETGRTPSRNDLKYVLLSKCTNNFIF 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2397539 2403834 + Cp4.1LG14g03300.1 Cpe14g00389 480773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00389 621 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 284 302 IPR018200 GO:0004843|GO:0006511
Cpe14g00389 621 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 25 40 IPR018200 GO:0004843|GO:0006511
Cpe14g00389 621 MobiDBLite consensus disorder prediction 369 425 - -
Cpe14g00389 621 CDD Peptidase_C19E 23 340 - -
Cpe14g00389 621 SUPERFAMILY Cysteine proteinases 17 341 IPR038765 -
Cpe14g00389 621 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 42 15 344 - -
Cpe14g00389 621 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 344 - -
Cpe14g00389 621 Pfam Ubiquitin carboxyl-terminal hydrolase 25 339 IPR001394 GO:0004843|GO:0016579
Cpe14g00389 621 MobiDBLite consensus disorder prediction 369 385 - -
Cpe14g00389 621 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 24 342 IPR028889 -
Cpe14g00389 621 MobiDBLite consensus disorder prediction 400 425 - -
Cpe14g00389 621 Gene3D Cysteine proteinases 18 344 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00634 Cpe14g00389 CCT
Cpe01g00579 Cpe14g00389 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00484 Cpe-Chr11:2797048 Cpe14g00389 Cpe-Chr14:2397539 5.74E-62 dispersed
Cpe14g00389 Cpe-Chr14:2397539 Cpe14g00962 Cpe-Chr14:8104779 1.10E-46 dispersed
Cpe01g00579 Cpe-Chr1:3340407 Cpe14g00389 Cpe-Chr14:2397539 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00389 K11855 - csv:101218797 1019.22