Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00402 ATGTCTGTTCATTTGTTTCTTTCAGTAGGCTCCACAAATGATTCACACAGAAACGACGATGAATTCATCAATGGCCTTCTTCCTCCAGGCTTCGACCAAAAATCCTGTTTAAGCCGATACCAACTGAATCTCTACAGAAAACCTTCTCCCTACATACCCTCTTCCCCTCTCCTCTCTAAGCTCCGCCGCTATGAAGCCCTCCACCGCCGCTGCGGCCCCAATTCGCCATCCTTCCGCCGAGCTCTTGCCGGTCTAACTTCACCCACAAACTCCACATCCCTGCCGGAAGACTGCAAATACGCTGTGGTTTTAACCCGCGATGGCCTAGGCAACCGTATCCTCGCTATTATCTCCGCCTTCTTCTACGCTCTAATGTCCGATCGCGTCTTTCTAATCGACCGAGGCAACGCTCTGGATGATCTCTTCTGTGAGCCCTTTCTTGGATCCTCGTGGATTCTGCCGTCGGATTTCCCTCTCCGCCGGGAATTTGGGGCGTTCCGCCAATCCTTCCCAGGGTCTTTTGGCAACATTTTGAGAAATGGAATGTTGAAGAAAACAATCGAAGATTCGCCTGCGAGTTATTTGTATCTCCATCTATCTCACGACGCCAGCGATTACGACAAACTGTTTTACTGCGACCGGCAGCAGAATCTTCTGAAGAAGGTCCCATGGCTGATTATGGAGACGAACAACTACCTGGTTCCCGGAATTTTTCTTGGTTCGTTTTTCAGAGAAGAGCTCAATAAACTCTTTCCGGCGAAGGACACTGTTTTCCACCATCTCGGCCGGTACCTCTTCCACCCGACGAACGGCGTCTGGGGGCTGATTTCGAGATCTTACAAGCCGTATCTCGCCAGAGCGAAAGAAATGTTAGGGATTCAGATCCGGAATTTCGGGTCGGAATCCGGTTCGTTTCAGGACCAGATGAATCAACTTCTAGCTTGCACACAGAAGAAGAAATTACTGCCGGATGTCGAGCAATCGTCGCCGGAGAAGTCGAATTCCACAGCGTCTCAGACAGTGAAAGTTGTGCTGGTGACGTCTCTGAGCTCTGAATACTCAGAAACCCTAAAGGAAATGTACTGGGAGCATGGGGGCGTCGACGGCGAGGTGGTGGCGGTGTACCAACCGAGCCACGAGGGGATTCAAAGCTCTAACAAAAAAATGCACAACCGGAAGGCACTGGCAGAGATGTACCTTCTGAGCTTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTAGCGCAGGGACTTGCCGGAGTGAAGCCATGGATGCTTTACAAGGCAGAGGATAAGGTGTTTCCGCCGTTGAATGAATGGCTGAAGTACAGAACGAGGAATGAGACAGGCGACTGGCCATGCCGGCGGGCGGTGTCGATGGAGCCGTGCCTGCACGTGCCGCCGGTGTGCGATTGCTATGAGATGAAGAGAAGAGATGGAGGGAATGAATTGCCGTTTGTGACGCATTGTGAAGATGCGAGTTGGGGCCTTAAGTTAGTTAATGAATTCAACTGA 1527 51.28 MSVHLFLSVGSTNDSHRNDDEFINGLLPPGFDQKSCLSRYQLNLYRKPSPYIPSSPLLSKLRRYEALHRRCGPNSPSFRRALAGLTSPTNSTSLPEDCKYAVVLTRDGLGNRILAIISAFFYALMSDRVFLIDRGNALDDLFCEPFLGSSWILPSDFPLRREFGAFRQSFPGSFGNILRNGMLKKTIEDSPASYLYLHLSHDASDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPGIFLGSFFREELNKLFPAKDTVFHHLGRYLFHPTNGVWGLISRSYKPYLARAKEMLGIQIRNFGSESGSFQDQMNQLLACTQKKKLLPDVEQSSPEKSNSTASQTVKVVLVTSLSSEYSETLKEMYWEHGGVDGEVVAVYQPSHEGIQSSNKKMHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAEDKVFPPLNEWLKYRTRNETGDWPCRRAVSMEPCLHVPPVCDCYEMKRRDGGNELPFVTHCEDASWGLKLVNEFN 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2483935 2485461 - Cp4.1LG14g03150.1 Cpe14g00402 480786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00402 508 Pfam Xyloglucan fucosyltransferase 8 476 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cpe14g00402 508 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 13 506 - -
Cpe14g00402 508 Gene3D - 96 144 - -
Cpe14g00402 508 Gene3D - 277 435 - -
Cpe14g00402 508 PANTHER FUCOSYLTRANSFERASE 2-RELATED 13 506 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01051 Cpe-Chr2:9679155 Cpe14g00402 Cpe-Chr14:2483935 7.55E-173 dispersed
Cpe14g00402 Cpe-Chr14:2483935 Cpe20g00012 Cpe-Chr20:76697 8.52E-168 dispersed
Cpe14g00402 Cpe-Chr14:2483935 Cpe01g01481 Cpe-Chr1:8838019 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00402 K13681 - csv:101222105 827.394