Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00411 ATGGAAGTCGCACCTCAGAGTTCGGAAGTCCCAATTACAAAGGTGGCTGACGATTCTGGAAATGATGCCATTGGTGATAAGGTCACGAATGGGGATGTAACTCAAGTAGGAAAAGATATTAAGAGCGAAGAGGAGGACAATGCTCTGGGCGGTGAGTTCATAAAAGTAGAAAAGGAGCCTCTGGAGGCGAAGGATACTCATCCAGCCAAAACAGTATCCGCAGAGGAGGATAAACCAACTATTGTTGAAAGAAGTTCAAGCAATTCAAGCAGAGAATTATTGGAGGCCCAAGAGAAGTCAAGAGATCTTGAGCTTGAAATTGAGAGATTAGCTGGAAGTTTGAAGCATTTAGAGTCAGAGAATTCAAGGCTACAGGATGAGGTATCACTCACGAAGGAGAAGCTTGAGGCAAGTGAAAAGAAGTTTGAAGTGCTTGAACTCGATCACAAGAAATCGAAAGAGCAGATTGTTGAATCTGAAGATAAATATAGTTCGCAGCTCAACAGTTTGCAAGAGGCACTGCAAGCTCAAGAAGCGAAGAACAAGGAGTTGATAGCGGTGAAAGAAGCATTTGATAGTTTGACAAATGATTTTGAGAATTCCCGCAAGCAGATTCAAGAGTTGGAACAAAAACTGAAGATCTCTGGTGATGAAACTTTGAAATTTGAGGAGCTTCACAAACAAAGTGGCTTGAATGCTGAATCTGAGGCTAAAAAAGCATTAGAATTTGAGAGGCTTCTTGAATCAGAAAGACTGAGTGCAAAAGAAAGAGAAGATCAAATCTCTTCCCTGCAAGAAAAAATCAAGGACTTAAATGACGAGATTGCTGAAAGCCAAAAGGTAAAAGAAGAACTTAGAACTACAGCAACTGAGCTTTTTGCTGTCCAGGGAGATCTAGAGCTTTCAAAATCTCAAGTGCTAGACTTGGAGAAGAAACTTTCTACGAAGGAAGGTTTGGTTGAAGAACTAACTCAAGAACTGGACGCACGAAGGGCTTCCGAATCTAAGATCAAGGAAGATATCTCAGCCGTTGAAAGCCAGTTTGCTTCATCTAAAGAGGATCTTCGTGTAAAGGTTTCTGAACTGGAAGAAATAAGATTGAAGCTTCAGGAAGAAAGTAACCAAAAAGAATCTGCTGAATCTGCTCTAAGAATTCTGGAAGCACAAATCTCTGATACCCAAAAGGAACTTTCAGCAGCTATCAAAGATAAAGAAGAGCTTGAAGTGACTGTAGCAGATCTCTCTAGCAATGCCAAACAAATGAAAGATTTATGCAACAGTCTAGAGGAAAAACTGAAGCTTTCTGATGAGAATTTTGGAAAAGCTGATTCTCTTTTATCTCAAGCTCTGTCCAACAATAAGGAGCTGGAACAGAAGTTGAAAAGTTTAGAGGATCTCCATAATGAAACTGGAATTGTCGCTCAATCTGCCACTCAGAAGAATCGTGAACTTGAGGAAATTGTCCGATCTTCAACTGCCTCATCGGAAGATGCAAAATCGCAATTAAGAGAACTCGAGACTCGATTTATAGCAGCCGAACAAAAGAATGTGGAGCTTGAACAACAGCTAAATTTGTTACAATTGAAAAACGATGACGTCGAGAGGGAAGCGACTGAATTATCTGAGAAAATAAAAGAACTTAGTACAAAGTTGATCGAGATTGAGCAGGAAAAGCAGCAACTGAATGAACAAAAGCAGGAATACCAGGATAAGGTACTGCAACTGGAATCTGCAATACAGCAGTCGACGTTGCAGCACGAGGAATTGGAGAAGGAGCTGAAAACCACAATTGGGAAATGTTCTGAATACGAGGAACGAGCAAACATGAATCACCACCGTAGCATTGAACTTGAAGAACTGATCCTGACATCTCATAACAAAATTGAAGTTGCAGATAAAAGGGCAAGTGAGTTGGAGTTGTTGCTTGAAACAGAAAAGTACAGAATTCAGGAGCTTGAAGAACAAATAAATACTTTAGAAAAGAAATGTGGGGAAGCTGAAGCAGAAACCAAGAAGAACTTTGACCAGGCATCTGTCTTGGCTTCTGAAATGANAAAGAAATGTGGGGAAGCTGAAGCAGAAACCAAGAAGAACTTCGACCAGGCATCTGTCTTGGCTTCTGAAATAAAGTCCTATGAAGAAAAAGTAGCAAGCCTTGAGACTAAATTGCATGTTGCCAACGTAAAGGAAAAGGAATTAAATGAATCTCTGGATATAGCGACAGAAGAGAAGAAAAAATTGGAAGATGCACTGAACTTATCTAGCAGTAGGCTAGCTGAATCAGAAAGTTTGGTCGAAGTTCTAAGGAACGATCTGAATGATACCCAAAAGAGACTCGAAAGTATAGAGAACGATCTCCAGGCTACTGGATTCAGAGAGACTGAGGTGCTGGAAAAGCTGAAATCTGCGGAGGAGAAACTCGAACACCAATTACGATCAATAGAGGAAACTACTGCAAGAAACACGGAACTTCAGTCGTTACATGACTCATTAGCCAAGGATTCAGAAACTAAAATGCTGGAAGCAGTAGCAAAGTTCACAAACAAAGAATCTGAGGCTAGCTCTCTAGTGGAGAAAATTAATGTTCTTGAAGAACAAATAAAAGCTTATGAGGATCAGATATCTGAAACCAATGAAAGATCTGCAGCTTTAAAAGAAGGATTGGAACAGACTTTGACGAAATTGAGTTCTTTGGAGAGTACAAATGGTGAACTCAAAAAGTATAGTTTGGAAGTTGAAAATAAAGTTTCTCAGATTTCGTCCGAGAACGAACTCTTAGTCGATACAAACATTCAACTCAAAACAAAGCTTAATGAACTTCAGGAGTTATTGAGCTCTGCACTTTCTGAAAAGGAAACTTCTTATCAACAGCTCGCTTCTCATAAGAGCTCTATTGCTGAATTAACCGAAAAGCACTCGAGAGCCATCGAGTTCCAGTCTGTAACCGAAGCTCGCCAAGTCGAGACAGATCAGAAATTGCAGGAAGCCATTCAAAAGTTCGATCAGAGAAATTTGGAGGCTGAGGAATTGAGTGGGAAACTAAAAATAGCAGAGAACGAGATAAAATTGTTTGAATCCAAGACTTTGGAAGCTTCTGCAGAAGCTGAAGCTCACAAGATTCAGCTAGAAGAGAGTCTTTTGAAAGTAAAACAACTAGAAAGCATGGCTGCAGAGAAGACTGTAAATGAGTTGAAATCACAGCTCTCTTCTGAAGAACAGAGGCTACAGTCTCAGATCGCTTCAATTATGGAAGACAACGACGTCCTCAATGAAACATACCAGAAGACCAAAAACGAATTCCAGTCAGAGATATTAAAGCTGGAAGGAAAATTGAAAGAACAGAGCAAAGTAGAAGAATCATTAAGATCTGAAATTGAAAATCTCAAGGCAGAGATCGCAGAGAATAATGGTTTAAAAATACGCCAAAAGGAGCTTGAAGATGAGGTTCAAAGTGTCCGATCAATCTGGGGAAAAGGTATTAAATATTCGTGGTTTTCGATTTTTCTTTTCCAATCTTTTTCTTTGAAGCCTTTAAAGTTGGTTTTTTATTATTTTTTTTTTCAAATTTCTTNGGGGAAAAGGTATTAA 3588 39.49 MEVAPQSSEVPITKVADDSGNDAIGDKVTNGDVTQVGKDIKSEEEDNALGGEFIKVEKEPLEAKDTHPAKTVSAEEDKPTIVERSSSNSSRELLEAQEKSRDLELEIERLAGSLKHLESENSRLQDEVSLTKEKLEASEKKFEVLELDHKKSKEQIVESEDKYSSQLNSLQEALQAQEAKNKELIAVKEAFDSLTNDFENSRKQIQELEQKLKISGDETLKFEELHKQSGLNAESEAKKALEFERLLESERLSAKEREDQISSLQEKIKDLNDEIAESQKVKEELRTTATELFAVQGDLELSKSQVLDLEKKLSTKEGLVEELTQELDARRASESKIKEDISAVESQFASSKEDLRVKVSELEEIRLKLQEESNQKESAESALRILEAQISDTQKELSAAIKDKEELEVTVADLSSNAKQMKDLCNSLEEKLKLSDENFGKADSLLSQALSNNKELEQKLKSLEDLHNETGIVAQSATQKNRELEEIVRSSTASSEDAKSQLRELETRFIAAEQKNVELEQQLNLLQLKNDDVEREATELSEKIKELSTKLIEIEQEKQQLNEQKQEYQDKVLQLESAIQQSTLQHEELEKELKTTIGKCSEYEERANMNHHRSIELEELILTSHNKIEVADKRASELELLLETEKYRIQELEEQINTLEKKCGEAEAETKKNFDQASVLASEMXKKCGEAEAETKKNFDQASVLASEIKSYEEKVASLETKLHVANVKEKELNESLDIATEEKKKLEDALNLSSSRLAESESLVEVLRNDLNDTQKRLESIENDLQATGFRETEVLEKLKSAEEKLEHQLRSIEETTARNTELQSLHDSLAKDSETKMLEAVAKFTNKESEASSLVEKINVLEEQIKAYEDQISETNERSAALKEGLEQTLTKLSSLESTNGELKKYSLEVENKVSQISSENELLVDTNIQLKTKLNELQELLSSALSEKETSYQQLASHKSSIAELTEKHSRAIEFQSVTEARQVETDQKLQEAIQKFDQRNLEAEELSGKLKIAENEIKLFESKTLEASAEAEAHKIQLEESLLKVKQLESMAAEKTVNELKSQLSSEEQRLQSQIASIMEDNDVLNETYQKTKNEFQSEILKLEGKLKEQSKVEESLRSEIENLKAEIAENNGLKIRQKELEDEVQSVRSIWGKGIKYSWFSIFLFQSFSLKPLKLVFYYFFFQISXGKRY 1195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2554662 2563097 - Cp4.1LG14g03080.1 Cpe14g00411 480795

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00411 1195 Coils Coil 446 473 - -
Cpe14g00411 1195 MobiDBLite consensus disorder prediction 1 101 - -
Cpe14g00411 1195 Coils Coil 797 820 - -
Cpe14g00411 1195 Coils Coil 702 785 - -
Cpe14g00411 1195 SUPERFAMILY Tropomyosin 519 785 - -
Cpe14g00411 1195 Coils Coil 306 326 - -
Cpe14g00411 1195 Coils Coil 635 669 - -
Cpe14g00411 1195 Coils Coil 1000 1148 - -
Cpe14g00411 1195 MobiDBLite consensus disorder prediction 37 82 - -
Cpe14g00411 1195 SUPERFAMILY Tropomyosin 301 560 - -
Cpe14g00411 1195 Coils Coil 846 887 - -
Cpe14g00411 1195 Coils Coil 86 155 - -
Cpe14g00411 1195 PANTHER EARLY ENDOSOME ANTIGEN 1057 1153 - -
Cpe14g00411 1195 PANTHER EARLY ENDOSOME ANTIGEN 1 1057 - -
Cpe14g00411 1195 Coils Coil 923 950 - -
Cpe14g00411 1195 Coils Coil 352 438 - -
Cpe14g00411 1195 Coils Coil 191 218 - -
Cpe14g00411 1195 Coils Coil 160 187 - -
Cpe14g00411 1195 Coils Coil 247 288 - -
Cpe14g00411 1195 Coils Coil 495 606 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00411 - - K20283 cpep:111810395 1926.37
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe01g00555 Cpe14g00411 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00555 Cpe-Chr1:3201906 Cpe14g00411 Cpe-Chr14:2554662 8.02E-37 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g1051 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo16g00528 . . . . Cpe14g00411 Cpe01g00555 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007249 2 1 1 0 1 1 2 1 1 1 1 1 2 1 1 1 1 2 2 1 1 1 1 1 1 1 1 2 3 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00411 Cpe_Chr14 FPKM 11.272204 12.821415 12.413838 14.143068 6.674629 4.86791 6.616271 30.492214 29.550879 31.91589