Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00415 ATGGTGAGGAAACATGGATGGCAACTGCCTGCTCATACTTTTCAGGTCGTTGCAATCACAGTGTTTTGTTTACTGGTTGTGGCATTTTATGCTTTCTTTGCTCCCTTCCTCGGTGGCCATGTCTGGGAGTACATATTGGTTGGCGTTTATTCACCAGTGGCTCTCCTTGTATTCACTCTTTATGTGAGATGCACTGCAATTAATCCAGCTGACCCTGGTATTATGTCTAAATTTGATAATCGGGTAACAAACCCCAACAATAATCAAGGGTTATCACTGAAGGGTCTACCACAAAATTTAGATGAAATTGTCAATGGCAGACATTCGTCTGCATCATCACCTTCCAGAAGTTCCATATCAGGAGCTAATACGAGTAGGAAAGGTTCAGTAGGAGAAGTTGGCAGAGAAGACAAACCAGTGGAACAACCAACAGTCCGCAGTGCTGATAAAATTGGACTAATTTGTTGCGCATTATTTGTACATGAAGATTGTCGAAAAAGGGATGGAGGGGCAGACCCTCAAAGTGCTGCCGAGGATGCTTTATTTTGCACATTGTGCAATGCTGAGGTGCGGAAGTTCAGCAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGTTTTGATCACCATTGCCGGTGGCTCAATAACTGTGTGGGGCAGAAAAACTATATCACATTTATCTCTCTTATGGCAGTAAGTCTTGTTTGGCTCGTTGTTGAAGCTGGAATTGGTATTGCAGTTTTAGTGCGTTGCTTTGTTAATAAAAGAGGCATGGAAACTGAAATTATCGATCGACTTGGAAATGGCTTTTCTCGTGCCCCGTTTGCGACAGTTGTGGCGATATGTACTGCAGTTTCCATGCTGGCCTGTATCCCTTTGGGCGAACTTTTCTTTTTCCACATGATATTAATTAAAAAGGGTATTACAACCTATGAATATGTCATAGCGATGAGGGCTACAAGTGAGGCCCCTGTTGGAGCTTCTGTTGACGAGGAATTGCCAAACATTATGTACTCTCCATCGGGATCTGCTACCACTGGTTTGAGTGGTGGAAGTTCTCTTGGTTTACAATACAAGGGGGCATGGTGTACGCCTCCAAGAGTTTTTGTTGATTATCAGGATGAAGTGGTGCCTCACTTGGAGCCAGGAATGGTCCCATCTACTGTTGACCCAGATGCAGCAGGAGCTTCAGAAAGAGGGCCAAAAGCACCCAAAAGAGCCGTTCGTCTTAGTGCTTGGAAACTTGCAAAACTGGATTCTAATGAGGCCATGAAGGCAGCTGCCAAAGCTAGAGCATCATCATCTGTTCTGAGGCCTCTTGATAACCGCCGTTTCCCAGATACGGAATTGAGCTCCAGCGGAAACCTAAGTGTTAGAAGTAGTGTGAGCACTGACACTGGTGCAAACAAAGAGATTAAAAATGATCTTAAGCTCTCTCCCATAAGAAATTCCTTGGCTCCGAGTCAAGCTAGTCAGGATGATTATGAAACTGGAACACAGAGCATGAGTAGCTTCAGTAGTCCAAGCCATGTGCATGAAACAGTCACCCTCAGTCCTCTCCCACATGGTAATGGTCTGGGTCTGGGTCGTTTTAGTGCTGCTTCATCAATTCCCAGCCTATTTCCTGAACGTCCATATTCTTCCAAGCCATCCTACCCTGTTGTCACTGACCCAAGATCTCATACTTCTGGGTTTGACGATAAGGTCGCTCAGAGGGGAAACACTACTGATCCATTATTGCTTTCAGCCCCTACATCTCTTCTCAGAGATGTCAGAAAGACATCTGTTGTCTGGGACCAAGAAGCTGGGAGGTATGTCTCAGTTCCTGTATCAGCTTCAGAAACCCGTCCTCTCAGATCGTCTGTGCAGATAGGTGTGCCAAATTTAAATGGCGAAACAAGCAACAACACTAGAAAGCCAGTTAATCCATTGCAACCTACATCATCTTCCAACACAAAAGCTCCATTGCAGCAAGCAGAGAAGTTAATGTACACAGGAGATTCCATTTTCTTCGGTGGTCCTCTACTGAACATCTCTTCTCGAGATAGTCTGAGAAACGAAAGGGTCTCGACTTCGAGAGAGAGCCAAGACAGAATGACGATGACTCTATCCCGCGAGTCCAGATTCAAAAGGGACTCGGCTTCAAACCAACTCCCTGTTTTTGTCCCTGGTGGTTATGAGCAAAGCCGACCATCCGGTTCTCGTTTAAGGTAG 2214 45.03 MVRKHGWQLPAHTFQVVAITVFCLLVVAFYAFFAPFLGGHVWEYILVGVYSPVALLVFTLYVRCTAINPADPGIMSKFDNRVTNPNNNQGLSLKGLPQNLDEIVNGRHSSASSPSRSSISGANTSRKGSVGEVGREDKPVEQPTVRSADKIGLICCALFVHEDCRKRDGGADPQSAAEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGQKNYITFISLMAVSLVWLVVEAGIGIAVLVRCFVNKRGMETEIIDRLGNGFSRAPFATVVAICTAVSMLACIPLGELFFFHMILIKKGITTYEYVIAMRATSEAPVGASVDEELPNIMYSPSGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMVPSTVDPDAAGASERGPKAPKRAVRLSAWKLAKLDSNEAMKAAAKARASSSVLRPLDNRRFPDTELSSSGNLSVRSSVSTDTGANKEIKNDLKLSPIRNSLAPSQASQDDYETGTQSMSSFSSPSHVHETVTLSPLPHGNGLGLGRFSAASSIPSLFPERPYSSKPSYPVVTDPRSHTSGFDDKVAQRGNTTDPLLLSAPTSLLRDVRKTSVVWDQEAGRYVSVPVSASETRPLRSSVQIGVPNLNGETSNNTRKPVNPLQPTSSSNTKAPLQQAEKLMYTGDSIFFGGPLLNISSRDSLRNERVSTSRESQDRMTMTLSRESRFKRDSASNQLPVFVPGGYEQSRPSGSRLR 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2600375 2606524 - Cp4.1LG14g02960.1 Cpe14g00415 480799

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00415 737 MobiDBLite consensus disorder prediction 682 737 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 381 406 - -
Cpe14g00415 737 ProSiteProfiles DHHC domain profile. 181 231 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 542 578 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 481 509 - -
Cpe14g00415 737 Pfam DHHC palmitoyltransferase 180 315 IPR001594 GO:0016409
Cpe14g00415 737 PANTHER PROTEIN S-ACYLTRANSFERASE 19-RELATED 9 538 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 106 144 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 106 127 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 624 654 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 130 144 - -
Cpe14g00415 737 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 538 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 446 469 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 686 712 - -
Cpe14g00415 737 MobiDBLite consensus disorder prediction 442 509 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00415 K20027 ZDHHC1_11; palmitoyltransferase ZDHHC1/11 [EC:2.3.1.225] - csv:101211028 1325.84
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe01g00552 Cpe14g00415 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01490 Cpe-Chr1:8893237 Cpe14g00415 Cpe-Chr14:2600375 6.06E-82 dispersed
Cpe01g01658 Cpe-Chr1:10301531 Cpe14g00415 Cpe-Chr14:2600375 1.08E-71 dispersed
Cpe09g00202 Cpe-Chr9:1168738 Cpe14g00415 Cpe-Chr14:2600375 1.29E-48 dispersed
Cpe09g00620 Cpe-Chr9:4470230 Cpe14g00415 Cpe-Chr14:2600375 3.66E-39 dispersed
Cpe13g00788 Cpe-Chr13:7120150 Cpe14g00415 Cpe-Chr14:2600375 3.50E-08 dispersed
Cpe14g00415 Cpe-Chr14:2600375 Cpe03g00641 Cpe-Chr3:3814926 6.57E-12 dispersed
Cpe01g00552 Cpe-Chr1:3181789 Cpe14g00415 Cpe-Chr14:2600375 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g1058 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo04g00658 Cmo16g00535 . . . . Cpe14g00415 Cpe01g00552 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005383 1 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 2 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00415 Cpe_Chr14 FPKM 2.12378 2.893732 1.678931 1.370157 0.887516 1.391037 0.917109 0.343988 0.283125 0.379977