Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00419 ATGAATCATAATAACCTCCTCGTTAACATTGCCCTCTCGTCTCTCGTTCCTCTTTTTCTCGCTTTGCTCCTCGTCGTCATTCCTACCCCTCCTTTCCTCACTGTCCCCGACGATTCCCTCAGCTGCCACCACCACCACCGTAAACCCTCAGCTGATGAAGAAGACCGAGCGAGTATTGGTTCCATTTGTGACACCTTCCCGATTGCCCTTCTCCCACCAGAAACTGCCAACACTTCTGTCTTATGCGTTGACCAAAATGGATGCTGCAACTTCACTACTGTACAGGCAGCTGTCGATGCTGTGTTGAATATGAGCTCCAAACGAAGCTTAATATGGATCAACACTGGAATCTACTTTGAGAAGGTGATGGTTCCGAGATTGAAACCGAACGTGACATTTCAAGGACAAGGCTACACAACCACGGCTATTGTTTGGAACGACACCGCCAATTCTTCGCATGGCACATTTTACAGCGGCTCCGTCCAAAATGTGGCGCCAATTCCAGGGCCGGGCGTCATCGGAGCACAGGCGGTGGCGATTCGGATCGGCGGAGACCAGGCGGCGTTTTGGAACTGCGGATTCTTTGGCGCTCAAGACACTCTCCACGATGACCGCGGCCGCCATTACTTCAAGGATTGCTACATCCAAGGCTCCATCGATTTCATCTTCGGAAACGGAAGATCCTACTACGAGAGTTGCCAGATGATTTCGATGGCGAATCCAGTTCCGCAAGGATCAAAGTTCGTGAACGGAGCCGTGACGGCGCACGGCAGAGCCTCCGCAGACGAGAACTCTGGATTTGCTTTTGTTAATTGTAGCATCGGTGGAACCGGCCGAGTGTGGCTCGGTCGCGCGTGGCGGCCGTTCTCTCGCGTCGTCTTTGCTAACACCGTCATGACGGATATTATTGCGTCGGAGGGATGGAATGACTTTAATGACCCCGCAAGGGACCAGACGATCTTCTATGGGGAGTACAACTGCAGTGGAGCAGGAGCCAACATGAGCGCAAGGGCTCCCTATGTTCAGAGGCTCAATGATACTCAAGCTTCCCCTTTCCTCAACCTCTCCTTCATTGATGCTGACCAATGGCTTCAACCCTATTAG 1104 52.26 MNHNNLLVNIALSSLVPLFLALLLVVIPTPPFLTVPDDSLSCHHHHRKPSADEEDRASIGSICDTFPIALLPPETANTSVLCVDQNGCCNFTTVQAAVDAVLNMSSKRSLIWINTGIYFEKVMVPRLKPNVTFQGQGYTTTAIVWNDTANSSHGTFYSGSVQNVAPIPGPGVIGAQAVAIRIGGDQAAFWNCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNGRSYYESCQMISMANPVPQGSKFVNGAVTAHGRASADENSGFAFVNCSIGGTGRVWLGRAWRPFSRVVFANTVMTDIIASEGWNDFNDPARDQTIFYGEYNCSGAGANMSARAPYVQRLNDTQASPFLNLSFIDADQWLQPY 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2627811 2629761 + Cp4.1LG14g03010.1 Cpe14g00419 480803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00419 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 41 367 - -
Cpe14g00419 367 PANTHER PECTINESTERASE 8-RELATED 41 367 - -
Cpe14g00419 367 Pfam Pectinesterase 82 360 IPR000070 GO:0030599|GO:0042545
Cpe14g00419 367 ProSitePatterns Pectinesterase signature 2. 215 224 IPR033131 -
Cpe14g00419 367 SUPERFAMILY Pectin lyase-like 78 366 IPR011050 -
Cpe14g00419 367 Gene3D - 75 367 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00212 Cpe-Chr3:1059808 Cpe14g00419 Cpe-Chr14:2627811 6.51E-117 dispersed
Cpe03g01325 Cpe-Chr3:10777213 Cpe14g00419 Cpe-Chr14:2627811 4.63E-50 dispersed
Cpe11g00872 Cpe-Chr11:7067094 Cpe14g00419 Cpe-Chr14:2627811 1.80E-64 dispersed
Cpe14g00419 Cpe-Chr14:2627811 Cpe18g00290 Cpe-Chr18:4447301 7.57E-77 dispersed
Cpe14g00419 Cpe-Chr14:2627811 Cpe18g00395 Cpe-Chr18:5184289 2.60E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00419 - - bhj:120090174 640.958