Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00449 ATGGCTAATCGGGGAGGAGGGTCGTTTTCGTCTCAAGGTGGGGGAGGAGATGGACTGTACACCGAGCTTTGGAAGGCATCGGCTGGGCCTCTTGTGGAAGTTCCTCGAGTTAATGACAAGGTTTTCTACTTCCCTCAAGGCCACATGGAACAGTTGGAGGCATCTACAAATCATGAACTGAATCAGAAACATCCTTTGTTTAAACTTTCCTCCAAAATTCTCTGCCGTGTTGTTGATGTTCGCCTGATGGCTGAGCAGGAAACAGATGAGGTTTATGCACAGATAACTTTAATGCCTGATTCAAATCAAGAGGAACCTACTAATCCTGATCCTTCGCCACCGGAGTGTCGTAAACCGAAAGTTCATTCGTTTTGCAAGGTCTTGACTGCTTCTGATACTAGCACCCATGGAGGATTCTCCGTGCTTCGTAAACACGCCACGGAATGCCTGCCTCCATTGGATATGACCCAACAGACCCCAACTCAAGAACTTGTAGCCAAAGATCTTCATAGTTACGAGTGGCGATTCAAGCATATCTTTAGGGGTCAACCACGAAGGCATTTGCTAACGACGGGTTGGAGCACGTTTGTTACTTCGAAAAGACTAGTTGCTGGAGATTCTTTTGTGTTCTTGAGAGGGGAAAATGGGGAATTACGAGTCGGAGTGAGGCGTCTTGCTCGCCAACAAACCAGCATGCCTTCATCTGTCATTTCGAGTGACAGCATGCACTTAGGAGTGCTTGCTACTGCATCTCACGCTGTGTCAACTCTAACTCGCTTCGTTGTCTATTATAAGCCAAGGGCGAGCCAGTTTATCGTCAGCTTGAATAAGTACATCGAAGCAATGAACAGGAAGTTCTTAGTTGGGATGAGATTCAAGATGAGATTCGAGGGAGAGGAGTCTCCCGAGAGAAGGTTTTCGGGTACCATTGTCGGAGTTGACGACATATCTCCTCACTGGCCCAATTCGAAATGGCGATCGCTAAGAATTCAATGGGATGAACTTGCATCTATTCCTCGACCTGATAGAGTTTCGCCATGGGAGATTGAACCTTTTGTGGCGCCTACGTCCCCGAGCATTCCGCAATCGGTTTCGGTAAAGAATAAAAGGCTTCGGCCTCCACTTGACATTCCAGATTCTGATAATTCAACCGTAACAACTCTACGACATCCAGGATCAACTCAATCACACGACGATAGAACACAGCTTAGCGTTACTGCTGCTGAAATGAAACGATTTGAAAATCACGCAACGTGGAATTACAAGCAAACGGATGTTAGCAGCATTGGGAATTCTATATCAAGGACTCCGAAGGAGGGCTCTTGGTTAGCTTCCCCAAACGGGAGTGTTTCGCAGCATCGATTACAGAATTTGACAGATGACCGAAACAGCAATTATGTTTGGTCAACCGTCTTCTCGGGAGCGCCAGCAGCACAGTCGACATGTCCAGCTCCACACCCATCTAATCCAAAGAGCAGCGACGAAGTTAACGATCTTGGGGAAAAGGGGAGGAAAACTGAGGTGGCTCCAAGCTGTCGCTTGTTCGGGATCGATATCATCGGTCATTCCAAGAGCCCAGTTCCACCCGAAATGGCTGCTGATCAACCGATTAGCGCACCAAATGAAATCACTGATGCAGAGCAGAACTCAGACCAGCCAAAGGCTTCTAAAGAAAGAAAATTAGGACTTTTACAAGTACCTCCTAAAGAGATCCAGCACAAGCAAAGCAGCTCGACCAACAGCCGAAGTCGGACCAAGGTGAGACTATACGAGATCTATTATACAGATTACTCATGTTTAGAACTTTATGGGCATACGCTAATTTATCGACTTCTTGTTGGTTGTCAATACATGAAGGTTCAAATGCAGGGGATGGCTGTCGGACGTGCGGTGGACCTTACGATGTTGGAAGGGTATGGCCAACTCATCGACGAACTTGAAAAGATGTTCGATATCAAGGGAGAACTTCACCCACGTGATAAGTGGGAGATTGTCTTCACAGACGACGAAGGAGATACGATGCTCATGGGCGATTACCCGTGGCAGGAATTCTGTAACATGGTCAGAAGAATATATATATGGTCGAGTCAAGATGTGAAGATGATGAGTTCGGTTAGCAAACTTACAATGTCTGCAATGGAATGCGATGGAACGGTAATAACCTCAGAGTCGGCCGACAGCTGA 2184 46.84 MANRGGGSFSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASTNHELNQKHPLFKLSSKILCRVVDVRLMAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHSYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSMHLGVLATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEESPERRFSGTIVGVDDISPHWPNSKWRSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSIPQSVSVKNKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRTQLSVTAAEMKRFENHATWNYKQTDVSSIGNSISRTPKEGSWLASPNGSVSQHRLQNLTDDRNSNYVWSTVFSGAPAAQSTCPAPHPSNPKSSDEVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQPISAPNEITDAEQNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVRLYEIYYTDYSCLELYGHTLIYRLLVGCQYMKVQMQGMAVGRAVDLTMLEGYGQLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQDVKMMSSVSKLTMSAMECDGTVITSESADS 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2820937 2825099 - Cp4.1LG14g02660.1 Cpe14g00449 480833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00449 727 MobiDBLite consensus disorder prediction 358 399 - -
Cpe14g00449 727 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 618 714 IPR044835 GO:0003677|GO:0006355|GO:0009725
Cpe14g00449 727 Gene3D - 285 356 - -
Cpe14g00449 727 Pfam AUX/IAA family 613 651 IPR033389 -
Cpe14g00449 727 Pfam AUX/IAA family 662 699 IPR033389 -
Cpe14g00449 727 MobiDBLite consensus disorder prediction 476 494 - -
Cpe14g00449 727 SMART B3_2 124 226 IPR003340 GO:0003677
Cpe14g00449 727 ProSiteProfiles PB1 domain profile. 615 696 IPR000270 GO:0005515
Cpe14g00449 727 SUPERFAMILY DNA-binding pseudobarrel domain 115 253 IPR015300 -
Cpe14g00449 727 CDD B3_DNA 122 224 IPR003340 GO:0003677
Cpe14g00449 727 MobiDBLite consensus disorder prediction 99 118 - -
Cpe14g00449 727 Pfam B3 DNA binding domain 124 224 IPR003340 GO:0003677
Cpe14g00449 727 PANTHER AUXIN RESPONSE FACTOR 9 618 714 - -
Cpe14g00449 727 Pfam Auxin response factor 250 328 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Cpe14g00449 727 PANTHER AUXIN RESPONSE FACTOR 9 15 590 - -
Cpe14g00449 727 MobiDBLite consensus disorder prediction 379 399 - -
Cpe14g00449 727 ProSiteProfiles B3 DNA-binding domain profile. 124 226 IPR003340 GO:0003677
Cpe14g00449 727 SUPERFAMILY CAD & PB1 domains 616 691 - -
Cpe14g00449 727 Gene3D - 121 225 IPR015300 -
Cpe14g00449 727 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 590 IPR044835 GO:0003677|GO:0006355|GO:0009725
Cpe14g00449 727 Gene3D - 613 703 - -
Cpe14g00449 727 MobiDBLite consensus disorder prediction 476 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00788 Cpe-Chr5:4895382 Cpe14g00449 Cpe-Chr14:2820937 0 dispersed
Cpe14g00449 Cpe-Chr14:2820937 Cpe17g01020 Cpe-Chr17:7722341 0 dispersed
Cpe18g00939 Cpe-Chr18:8268551 Cpe14g00449 Cpe-Chr14:2820937 2.58E-24 transposed
Cpe01g00608 Cpe-Chr1:3504405 Cpe14g00449 Cpe-Chr14:2820937 0 wgd
Cpe13g00097 Cpe-Chr13:707914 Cpe14g00449 Cpe-Chr14:2820937 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50506 PF02309 AUX_IAA 2.20E-11 CL0072 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00449 K14486 - csv:101213942 1142.1