Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00472 AGACAAACTGTGGTAGGAAATGAGAGTTGCATGAACGTCGTGAACCATCGAACCAGAGAGTCGCGGAGGGCAAATGAGCGAAAGAAGCGCCAAACTTTGCATCTCCCCGGAAAGACAGAATTAGATCATCTGTACAAAAATTATCAGTCTATTTATGATCAATATGGTCATCTACGTGATGAAGCGGAAAGAATTGTTAAATCTGAAAAGGAAAACGAGGAGGATAAGGAAGATGTTTGTTCTTCATCTTTAAGCTCTAGTTCCGACTCTGATTCGGAGTACTTTTCGTCGGAGGAAGTAAATATCACTAGCAGTGTTCATAATTTACAGAATGAACAGTCGAGTAACTGGTTTGTTCAAATTCAAACTGAGGAACTCGAAAAGCAAATTGTTCAGAAGAATGAAGCTTTGGCTAAGGTTGATTTTCTGCATCGGGAACTAGATAGTGTACGAACACAGAAACGGGAAATGGAAAATAGGAAGAACAAGGAGATATCTGAGAATATGGCTTTGATAGGAAATTTGAAAGAAGAATTGGTCGAAAAGATTGGAGTTGAAAAGAAGATGCTGGAAGAGAAAGAGAGAGTTCTTGCTCGGAGTAAGGATCTGGAAATGGAAATAGACACTCTGCATTACCGAAGAAGGGAAATAGAAGAACAGAATATTCGGATGAGATCAGAAAATCAGTGGCTGAACACTAAAATTTCTGAACTGGAGATGGCATTGACGAGTAAAGAGACAGAAGCTTCTTCTCAGACGGTCGCGTTAATGGAGCAAGTCAAGAATCTGAAACATACAATAAATGGATTGCAGACGGAAAAAACCAAATTAGGGCAAGAAATGGAGCAATATAAACAAGAAGTTTCTCACCGATTTTCGGAAATGGAGGAGGAAAACAAGAAATTGAGAACCAAAATTGTCGACCAGGAAACAATCCTAAAGGAAAAAGAGGAAACGATAATTAAATTCAACGAGAAATACAAGAAAGCGAAGAGTTGCTTACCTGATGTCGCCTCGAGCCTGATAAACACAGAGAGGAAGATGGAAGAATTAGCAGAGGATCTTCGTTGCGGCCTGGAAGATAAAATCCGTTTATTGTCGCAAAGGATTCTCGTTGCGGAGCAACTACACAACGAAAGCAGAGAAAATTTCAGAGTGAAAAACAAAAGACATGAGCAAGAGAAGAGACATTTCGAACAAAAAATCGAAAAACACGAAGAGGAACTGATGAAACTCAGTAATGTGAACGAATTCGGAATGGACAGAGTAGCAAGAAGATTCGAAGAAGAGAGCAAGGAAACGGAAGTTGTTGGTTTAGTTGAAGATCTGTACAAAAATTATCAGTCTATTTATGATCAATATGGTCATCTACGTGATGAAGCGGAAAGAATTGTTAAATCTGAAAAGGAAAACGAGGAGGATAAGGAAGATGTTTGTTCTTCATCTTTAAGCTCTAGTTCCGACTCTGATTCGGAGTACTTTTCGTCGGAGGAAGTAAATATCACTAGCAGTGTTCATAATTTACAGAATGAACAGTCGAGTAACTGGTTTGTTCAAATTCAAACTGAGGAACTCGAAAAGCAAATTGTTCAGAAGAATGAAGCTTTGGCTAAGGTTGATTTTCTGCATCGGGAATTAGATAGTGTACGAACCCAGAAACGGGAAATGGAAAATAGGAAGAACAAGGAGATATCTGAGAATATGGTTTTGATAGGAAATTTGAAAGAAGAATTGGTCGAAAAGATTGGAGTTGAAAAGAAGATGCTGGAAGAGAAAGAGAGAATGGAAGAAAAAGAAGAACAAGAGTTCCTGTTAAGAGAGAAACTATGGAATCTAGAGGCGAAAATAAGCAAAGAGGGAGGAGAGAAACTGAATCTGATCAGAACCCTCGGACAATTCGAGAAGAAGATGACAAAAATGGAGAACTTAGTAAAGGAGAAAGATGAAGAAGTGTTCCGACTTGCAGAAGAGAAGAGAGAAGTGATTCGACAATTATGCGTTGTGATCGATCACTATCGAAGCCAGTCTGATCATCTCAAGGACGCCATGCTCGGGAAGACGGAGATGACAAAGCACCGGTTCAGGAATTCTTTGAAGTCTCTATTTGGGAGTTACCTTGATCCAGAAACAAATGAACGGCTCAAAGGAAATAAATCAGTTATCGAGGACAAGGTGAATAAAATTAGACAACTCATAAAAGGTGAAGATCTAGGAGTAGAAGACCACGACCAATCAGAAATTCGCAAGAAACAGTCCATTGATGAATTAATTGATGATTTCCTTAACGTTTATCAGGCCCTCTATGAACAATACGACAGCCTAACCGGAGAATTGAGAAGAAAATTTCAAAAAAGAAGAGAAAAGGAAAGCTCTTCATCTAGTTCATCCGACTCGGATTCAGATGATTCTTCAAAGAAAAAGGTCAGCAAAGATGATCGAGGGTTGGAGAGAGAATTCCAAGAAGTTGGTGAAATCAAGCAGGAACTTGACGCAGCACTTTCAGAAGTAGCCGATTTGAAAAGGATATTGGCAACTACAATACGATACAAGAAGCAGATGGAATTATCANAACATGAATCCCTAAATTCAGAACATCTGACAGCTTTAAGTAAGCTACAAGAAGCAGATGGAATTATTAGAGATTTGAAGGTTGAAGCTGAGACTTGGGACTCTCAGAAGTCTAAATTTCAGCTTGAAATCGAAGAACTGAATCTGGCGTTAAGTAATGCTGCTTTAAGTAAGCTACAAGAAGCAGATGGAATTATTAGAGATTTGAAGGTTGAAGCTGAGACTTGGGACTCTCAGAAGTCTAAATTTCAGCTTGAAATCGAAGAACTGAATCTGGCGTTAAGTAATGCTGAATCTGAGTTGAATGAGAGATTAAAAGGTATGGAAACAGAGATGAATAACTACATTGAAGAAAAGGAGACTGCAAGGAGGAAGATTGANTTTATTACGAAAGAGATGACAAAGCACCGGTTCAGGAATTCTTTGAAGTCTCTATTTGGGAGTTACCTTGATCCAGAAACAAATGAACGGCTCAAAGGAAATAAATCAGTTATCGAGGACAAGGTGAATAAAATTAGACAACTCATAAAAGGTGAAGATCTAGGAGTAGAAGACCACGACCAATCAGAAATTCGCAAGAAACAGTCCATTGATGAATTAATTGATGATTTCCTTAACGTTTATCAGGCCCTCTATGAACAATACGACAGCCTAACCGGAGAATTGAGAAGAAAATTTCAAAAAAGAAGAGAAAAGGAAAGCTCTTCATCTAGTTCATCCGACTCGGATTCAGATGATTCTTCAAAGAAAAAGGTCAGCAAAGATGATCGAGGGTTGGAGAGAGAATTCCAAGAAGTTGGTGAAATCAAGCAGGAACTTGACGCAGCACTTTCAGAAGTAGCCGATTTGAAAAGGATATTGGCAACTACAAGTAAAGAACATGAATCCCTAAATTCAGAACATCTGACAGCTTTAAGTAAGCTACAAGAAGCAGATGGAATTATTAGAGATTTGAAGGTTGAAGCTGAGACTTGGGACTCTCAGAAGTCTAAATTTCAGCTTGAAATCGAAGAACTGAATCTGGCGTTAAGTAATGCTGAATCTGAGTTGAATGAGAGATTAAAAGGTATGGAAACAGAGATGAATAACTACATTGAAGAAAAGGAGACTGCAAGGAGGAAGATTGAAGAAGGGGAAAAAACTATAGATGAATTGAAGGCTTTGGCTGATCAGTTGAAGGAGAAGTTGTCAGCCACAATGGAAGAAAAGGAAGCTCTGAACTCACAGCACTTGAAAACTTTAAGTAGGGTACATGAAGCAGATATGATCACAAGATATTTGAAGGTTGAATCAGAAACCTGGGGTGTTGAAAAATCTAAATTTCTTCTCGAGATTGAAGAGCTGAATCAGAAACTGGGTGCTGCCGGAAAATTGGAAGCGCAATTGATTNGGGGTGTTGAAAAATCTAAATTTCTTCTCGAGATTGAAGAGCAGAATCAGAAACTGGGTGCTGCCGGAAAATTGGAAGCGCAATTGAATGAGAGGTTGAAAGATATTGGAATTGAAAACGAATATTTGATCAAGGAAAAGGAATCTGCGCAGAGGACGATTGAAGAGATGAGTCAGAGGCTGAGCAATGCTGTTAAGATAGAAGCAGAACTCAGTGGAAGATTGAAAGATATTGAAACTGAGAAAGATGGGTTGATCAAGGAAAAGGAGATTGCATGGAAGGAGATTGAACAAGGTAAACGAGTTAGAGAAGAATTAAACGCCATGGTTGATCAACTGAACAGTCAATTGACAATTACAGCAGAAGAAAAGAAATCTCTCAATTTACAACTTGAAAAGGAGAAAGTTGAGTTGTTGAGATCAATTGCTGATCATCAAAGAAATCTGAAGGAACACGAGGATGCATACAAGAAGCTAAATGATGAGTTTCAAGAATGTAAGCTAAAGCTTGATAATGCAGAAATGAAGATGGCAGAAATGAGTCGAGAGTTTCATAATGACATTAGATCAAAGGAGCAAGTGAAAGATGACCTGGAGCTAATGGTTGAGGATCTTAAAAGAGAGCTGGAAGTAAAAAGTGATGAGATAAATAGCCTAGTTGAAAACGCTCGCACGATCGAAGTCAAGCTTCGGTTATCAAACCAGAAGCTTCGTGTTACAGAACAATTATTAACTGAAAAGGAAGAGATTTTTCGGAAAGCTGAATTGAAATATCAAAAGGAACGGAAATTGCTTGAAGAAAGAATTCATGGACTATCTGCAACAGTTGTTGCTAACAAAGTAACGTATCAAAAGGCGATATCAACTGTTTCAGAAAACATTAACAGTAACCTCTCTCAACTGGAATGTGTCATCAGGAAATTCATATTGGAGTATGCAAAGTATGAGAAGTGTGTTATGGAGACATCCCGCGATCTACGGCTTACAAAGAGTTGGGTTTCAAATGCTATTGAAGAAACAGAAGGCCTAAAAAAAGAGGTGGCAGACCTTGGGAAACAACTTGAAGATAAGAAAGAGAGGGAATCCATATTAGTACAACAGGTTGAGAAGTTGGAGATTAAGGCCAACAAGGAAGGATCTGAGAAGGATGGATTGGTTGAAGCAATCCACGAACTTGAAAAGAGACAGAGAGAATTGGAGAAGATGATGGAAGAGAAGAATGAAGGTATGGTGGATCTGAAAGAGGAGAAGAAAGAAGCGATAAGGCAACTTTGCATGTTGATAGAGTATCATCGGGACCGCTATGATTTTCTCAAGGATGAGGTCTTGAAGTTGAATGTTAAAGGAGGCCAGAGTGTATGTTCTAAAAAAGAATGGAGATCATTCGAGAAATAA 5352 38.64 RQTVVGNESCMNVVNHRTRESRRANERKKRQTLHLPGKTELDHLYKNYQSIYDQYGHLRDEAERIVKSEKENEEDKEDVCSSSLSSSSDSDSEYFSSEEVNITSSVHNLQNEQSSNWFVQIQTEELEKQIVQKNEALAKVDFLHRELDSVRTQKREMENRKNKEISENMALIGNLKEELVEKIGVEKKMLEEKERVLARSKDLEMEIDTLHYRRREIEEQNIRMRSENQWLNTKISELEMALTSKETEASSQTVALMEQVKNLKHTINGLQTEKTKLGQEMEQYKQEVSHRFSEMEEENKKLRTKIVDQETILKEKEETIIKFNEKYKKAKSCLPDVASSLINTERKMEELAEDLRCGLEDKIRLLSQRILVAEQLHNESRENFRVKNKRHEQEKRHFEQKIEKHEEELMKLSNVNEFGMDRVARRFEEESKETEVVGLVEDLYKNYQSIYDQYGHLRDEAERIVKSEKENEEDKEDVCSSSLSSSSDSDSEYFSSEEVNITSSVHNLQNEQSSNWFVQIQTEELEKQIVQKNEALAKVDFLHRELDSVRTQKREMENRKNKEISENMVLIGNLKEELVEKIGVEKKMLEEKERMEEKEEQEFLLREKLWNLEAKISKEGGEKLNLIRTLGQFEKKMTKMENLVKEKDEEVFRLAEEKREVIRQLCVVIDHYRSQSDHLKDAMLGKTEMTKHRFRNSLKSLFGSYLDPETNERLKGNKSVIEDKVNKIRQLIKGEDLGVEDHDQSEIRKKQSIDELIDDFLNVYQALYEQYDSLTGELRRKFQKRREKESSSSSSSDSDSDDSSKKKVSKDDRGLEREFQEVGEIKQELDAALSEVADLKRILATTIRYKKQMELSXHESLNSEHLTALSKLQEADGIIRDLKVEAETWDSQKSKFQLEIEELNLALSNAALSKLQEADGIIRDLKVEAETWDSQKSKFQLEIEELNLALSNAESELNERLKGMETEMNNYIEEKETARRKIXFITKEMTKHRFRNSLKSLFGSYLDPETNERLKGNKSVIEDKVNKIRQLIKGEDLGVEDHDQSEIRKKQSIDELIDDFLNVYQALYEQYDSLTGELRRKFQKRREKESSSSSSSDSDSDDSSKKKVSKDDRGLEREFQEVGEIKQELDAALSEVADLKRILATTSKEHESLNSEHLTALSKLQEADGIIRDLKVEAETWDSQKSKFQLEIEELNLALSNAESELNERLKGMETEMNNYIEEKETARRKIEEGEKTIDELKALADQLKEKLSATMEEKEALNSQHLKTLSRVHEADMITRYLKVESETWGVEKSKFLLEIEELNQKLGAAGKLEAQLIXGVEKSKFLLEIEEQNQKLGAAGKLEAQLNERLKDIGIENEYLIKEKESAQRTIEEMSQRLSNAVKIEAELSGRLKDIETEKDGLIKEKEIAWKEIEQGKRVREELNAMVDQLNSQLTITAEEKKSLNLQLEKEKVELLRSIADHQRNLKEHEDAYKKLNDEFQECKLKLDNAEMKMAEMSREFHNDIRSKEQVKDDLELMVEDLKRELEVKSDEINSLVENARTIEVKLRLSNQKLRVTEQLLTEKEEIFRKAELKYQKERKLLEERIHGLSATVVANKVTYQKAISTVSENINSNLSQLECVIRKFILEYAKYEKCVMETSRDLRLTKSWVSNAIEETEGLKKEVADLGKQLEDKKERESILVQQVEKLEIKANKEGSEKDGLVEAIHELEKRQRELEKMMEEKNEGMVDLKEEKKEAIRQLCMLIEYHRDRYDFLKDEVLKLNVKGGQSVCSKKEWRSFEK 1783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2967919 2986102 - Cp4.1LG14g02470.1 Cpe14g00472 480856

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00472 1783 Coils Coil 936 982 - -
Cpe14g00472 1783 MobiDBLite consensus disorder prediction 465 495 - -
Cpe14g00472 1783 Coils Coil 381 415 - -
Cpe14g00472 1783 Coils Coil 1507 1541 - -
Cpe14g00472 1783 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 998 1078 IPR011684 GO:0003779
Cpe14g00472 1783 Coils Coil 1652 1693 - -
Cpe14g00472 1783 Coils Coil 58 79 - -
Cpe14g00472 1783 Coils Coil 133 167 - -
Cpe14g00472 1783 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 698 778 IPR011684 GO:0003779
Cpe14g00472 1783 Coils Coil 1359 1407 - -
Cpe14g00472 1783 MobiDBLite consensus disorder prediction 65 96 - -
Cpe14g00472 1783 Coils Coil 260 319 - -
Cpe14g00472 1783 MobiDBLite consensus disorder prediction 785 813 - -
Cpe14g00472 1783 Coils Coil 457 478 - -
Cpe14g00472 1783 Coils Coil 1415 1502 - -
Cpe14g00472 1783 Coils Coil 984 988 - -
Cpe14g00472 1783 MobiDBLite consensus disorder prediction 1085 1113 - -
Cpe14g00472 1783 MobiDBLite consensus disorder prediction 480 495 - -
Cpe14g00472 1783 Coils Coil 1701 1742 - -
Cpe14g00472 1783 MobiDBLite consensus disorder prediction 65 80 - -
Cpe14g00472 1783 Coils Coil 581 601 - -
Cpe14g00472 1783 MobiDBLite consensus disorder prediction 81 96 - -
Cpe14g00472 1783 Coils Coil 815 842 - -
Cpe14g00472 1783 Coils Coil 1115 1156 - -
Cpe14g00472 1783 MobiDBLite consensus disorder prediction 465 479 - -
Cpe14g00472 1783 Coils Coil 200 220 - -
Cpe14g00472 1783 Coils Coil 532 566 - -
Cpe14g00472 1783 Coils Coil 630 660 - -
Cpe14g00472 1783 Pfam KIP1-like protein 1003 1072 IPR011684 GO:0003779
Cpe14g00472 1783 Pfam KIP1-like protein 703 772 IPR011684 GO:0003779
Cpe14g00472 1783 Coils Coil 1185 1265 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 1434 1769 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 594 686 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 909 983 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 989 1250 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 1247 1318 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 1322 1377 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 1374 1444 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 689 910 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 495 597 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 96 432 - -
Cpe14g00472 1783 PANTHER COP1-INTERACTIVE PROTEIN 1 428 498 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00472 - - - cmax:111483401 1345.87
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00631 Cpe-Chr1:3641502 Cpe14g00472 Cpe-Chr14:2967919 6.67E-24 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g108 . . Bda06g00139 Bda08g00482 . Bpe07g00078 . . . Cmo16g00608 . . . . . Cpe14g00472 . . . . . . . . Cla07g01412 Cam07g1514 Cec07g1610 Cco07g1570 Clacu07g1502 Cmu07g1472 Cre07g1849 . . Cone6ag0838 . . . . Cme07g01580 . . . . . . Bma05g00855 Bma12g00049 . . . . Cma16g00559 . . . . . . . . . . . . . . . . . . . Csa04g00641 Chy07g01168 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001955 2 3 1 4 1 2 2 2 2 2 1 2 3 2 2 3 2 3 2 2 2 2 2 2 2 2 2 5 3 1 66
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00472 Cpe_Chr14 FPKM 20.674164 21.914843 26.915581 29.852741 19.013145 20.093275 20.696627 22.653381 22.136084 22.456505