Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00487 ATGGAAAGCTTCAGCTTGCTCAAATACTGGAGAGGGGGCGGCGGTGCTACTCTTCCTCCTCCTGCTGCTGCTGTTGCTGCTGCCACCGTTGATTTTGCTTTTAATGGAAATTGCTCTGCTGCCGGCGCTGTCAGTGTTGTCACCGCCGTGCCGCAGAACCAGGCGGAAAGTGATGAGGAGAATGATGAGGATGATGGGCCGTTCTTTGATTTGGAGTTTGCTGTTCCTGATGAGGATGAGAGTCGAAAACAGGGGGGAAATGATGAGGGGAGGAGAAACTGTGCTGGTGGAAGTGAAGGAGAAGAAGAAGATGATGATGAAGAAGATGGGGATTCGGATGGTGAGAGAGAGTTCAACTTCACGCTGTCATCTGGCTCTAGCAACGAACATGCCGATGCCAATCTCGCGTTTTCTCCTTCTGATGACTTGTTTTTCAAGGGAAAGCTTGTCCCAGTTGAAGCCTCCTCCAATGGCGGTTCTGAACCAAACGCCAGGCCGCAGCTTCGTGTCACATTGTTGAAATCAGCTGCCAAGTTTAGGGTATTCATGTCGGGTCTCAAGAAGTCGAAATCGAACGGGGAAAAGAAACCAGAGACAGATGGATCTGTTGGGGAAATGACCAAAACTGAGGTGAAGGAAGAGACGACGGAAATCCCACCGGAGAAAAACGAGAACCAACCGGGAAAAGAACAGAACCAGACGAAAAGTAAGCTTTTCGCTGTGAAACTTAAGGTGGAGGAAGTTCCGATCATGTCTCTGTTTACCAGAGACAACAGTTCAAGAGGCTCCGGAGGAACTACCAGCAGCAGCAACAACAACAACAACAACAATAAACCCCAGAAACAAAGCTCCGATGAACTAACTTCGGAGGAAAATCGATTCTCCAAAGACGTAATAATGCAAAAGTACTTGAAGATGGTGAAGCCTCTGTACATTCGGGTTTCAAGGAGATACGGCGAGAAGTTCAGGCTATCCGGGCAGCTTATTTTGGGGGCAGCCGGAGCCAAGTCCGGTGCACCGCCACCCACCTCGCCGCCGTTGGAGAAACCCATGACAAAGACAGAGACAGAGACACAGACACAGACAGATGGTGTGCAAGTGCAAGCACCAACAACCACCGCCAACAGCAAGGGCAGGAACATGCCGGCTAAGCTAAGAGTAGTTTGCAAGCATTTGGGGAAAAGTCGGTCAGCTTCCTCCGCCGTAGCAGCGGCGCCACCAGGGATGGCTCCCTCGAGAAGGGACGATTCGCTTATCCAGCAACAAGACGGAATCCAGAGCGCGATTCTCCATTGCAAGAGATCCTTCAACGCATCTCGAGATTCAGAGTCTTCCTTGCTATCAAGGTCAGTAAGCGACACTCTGCGTGAGAAACCTTCAGATTTAACAGAAAAACAATGA 1401 50.25 MESFSLLKYWRGGGGATLPPPAAAVAAATVDFAFNGNCSAAGAVSVVTAVPQNQAESDEENDEDDGPFFDLEFAVPDEDESRKQGGNDEGRRNCAGGSEGEEEDDDEEDGDSDGEREFNFTLSSGSSNEHADANLAFSPSDDLFFKGKLVPVEASSNGGSEPNARPQLRVTLLKSAAKFRVFMSGLKKSKSNGEKKPETDGSVGEMTKTEVKEETTEIPPEKNENQPGKEQNQTKSKLFAVKLKVEEVPIMSLFTRDNSSRGSGGTTSSSNNNNNNNKPQKQSSDELTSEENRFSKDVIMQKYLKMVKPLYIRVSRRYGEKFRLSGQLILGAAGAKSGAPPPTSPPLEKPMTKTETETQTQTDGVQVQAPTTTANSKGRNMPAKLRVVCKHLGKSRSASSAVAAAPPGMAPSRRDDSLIQQQDGIQSAILHCKRSFNASRDSESSLLSRSVSDTLREKPSDLTEKQ 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3093115 3095845 + Cp4.1LG14g02280.1 Cpe14g00487 480871

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00487 466 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 462 IPR039619 GO:0005886
Cpe14g00487 466 MobiDBLite consensus disorder prediction 75 98 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 439 453 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 349 379 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 117 134 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 251 290 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 189 224 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 253 283 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 185 237 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 437 466 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 396 417 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 51 134 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 333 379 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 56 74 - -
Cpe14g00487 466 MobiDBLite consensus disorder prediction 99 114 - -
Cpe14g00487 466 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 462 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00487 - - - cmax:111483413 679.863
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe05g00634 Cpe14g00487 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00634 Cpe-Chr5:3882787 Cpe14g00487 Cpe-Chr14:3093115 7.49E-15 dispersed
Cpe09g00056 Cpe-Chr9:340530 Cpe14g00487 Cpe-Chr14:3093115 4.36E-19 dispersed
Cpe13g00281 Cpe-Chr13:2220087 Cpe14g00487 Cpe-Chr14:3093115 3.38E-14 dispersed
Cpe01g00644 Cpe-Chr1:3721179 Cpe14g00487 Cpe-Chr14:3093115 0 wgd
Cpe14g00073 Cpe-Chr14:404240 Cpe14g00487 Cpe-Chr14:3093115 1.60E-20 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g55 Blo02g01125 Blo03g00230 Bda06g00124 Bda08g00500 Bpe05g00664 Bpe07g00091 . . . Cmo16g00625 . . . . . Cpe14g00487 Cpe05g00634 . . . . . . . Cla07g00738 Cam07g0791 Cec07g0856 Cco07g0826 Clacu07g0772 Cmu07g0781 Cre07g1132 . . Cone14ag0046 . . . . Cme07g01608 . . Bda07g01911 . . . Bma05g00838 Bma12g00061 . Cmo02g01105 . . Cma16g00576 . . . . . . . . . . . . . . . . . . . Csa04g00618 Chy07g01194 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005486 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00487 Cpe_Chr14 FPKM 15.546053 15.238294 11.492918 13.139815 19.010445 15.586989 18.466854 16.469994 16.09679 13.153863