Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00491 ATGGAGGATTGGGATTTGCAAGCAATTGTAAAAGGATGCAATGGATCAATTACTCCTTCAAGAACAGCAACGCTCATGGAAGATCCAAATTTGGTCTCTTTTTTGATCGAAAAAGATGAAATTTTAAGTTCTTGTTCAGTGTATGATGAGTTTGAAGGGTTGTTTGGGAGCTCCGATGACTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCGCCGCCATTTCTGGTCTTCTCAGAGAGCTTAAGGAACCGGAAAAGCTTCATCGGAAGAGCCAAATCGCTGCAACTAAACAGAAACAGAGTCAGCCTCCCATGGAGGATTGGGATTTGCAAGCAATTGTAAAAGGATGCAATGGATCAATTACTCCTTCAAGAACAGCAACGCTCATGGAAGATCCAAATTTGGTCTCTTTTTTGATCGAAAAAGATGAAATTTTAAGTTCTTGTTCAGTGTATGATGAGTTTGAAGGGTTGTTTGGGAGCTCCGATGACTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCGCCGCCATTTCTGGTCTTCTCAGAGAGCTTAAGGAACCGGAAAAGCTTCATCGGAAGAGCCATATCGCTGCAACTAAACAGAAACAGAGCAAGAAAAGTCGGCAAAACAGAGTCGTGAAAGAGGTGAAAGCAGAGGGGGTGTGTTCGGATTCATGGGGATGGCGGAAATATGGACAGAAACCGATCAAAGGGTCGCCATATCCGAGAAGCTATTATCGATGTAGCTCCTCCAAAGGATGCTCTGCTAGAAAGCAAGTTGAACGGAGCCTCTCCGATCCCGGCGCCTTCGTTGTCACCTACACGGCTGAGCACAACCACGCTGAGCCTACTCGCCGTAACGCCCTTGCCGGAACCACGAGGAAGAAGTTTCCGGCGCCGGAAAACACGAGTTTGGATAGGTCTGTGGCGTCCGTTGAAGAAGAACAGCCAATGGAGGGAGTTGCAGAGGGGGGAGTTATTATGGATTTGCCATTCGAATTCTTTTCTGGTTTGGAGGATTTTCTTTTTCAATGA 1032 47.29 MEDWDLQAIVKGCNGSITPSRTATLMEDPNLVSFLIEKDEILSSCSVYDEFEGLFGSSDDSASASASASAAAISGLLRELKEPEKLHRKSQIAATKQKQSQPPMEDWDLQAIVKGCNGSITPSRTATLMEDPNLVSFLIEKDEILSSCSVYDEFEGLFGSSDDSASASASASAAAISGLLRELKEPEKLHRKSHIAATKQKQSKKSRQNRVVKEVKAEGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSLSDPGAFVVTYTAEHNHAEPTRRNALAGTTRKKFPAPENTSLDRSVASVEEEQPMEGVAEGGVIMDLPFEFFSGLEDFLFQ 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3117647 3119283 - Cp4.1LG14g02220.1 Cpe14g00491 480875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00491 343 SMART WRKY_cls 221 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe14g00491 343 MobiDBLite consensus disorder prediction 286 316 - -
Cpe14g00491 343 MobiDBLite consensus disorder prediction 84 105 - -
Cpe14g00491 343 ProSiteProfiles WRKY domain profile. 216 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe14g00491 343 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe14g00491 343 Gene3D WRKY domain 200 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe14g00491 343 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 106 310 IPR044810 GO:0003700
Cpe14g00491 343 MobiDBLite consensus disorder prediction 187 211 - -
Cpe14g00491 343 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 106 310 - -
Cpe14g00491 343 SUPERFAMILY WRKY DNA-binding domain 219 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00637 Cpe14g00491 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00491 Cpe-Chr14:3117647 Cpe19g01184 Cpe-Chr19:7950073 1.18E-35 dispersed
Cpe01g00650 Cpe-Chr1:3762476 Cpe14g00491 Cpe-Chr14:3117647 4.00E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50510 PF03106 WRKY 7.20E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00491 K13426 - cpep:111810405 621.698