Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00507 ATGGATTTTGGTTCATCTTCAAGATTTCATCATCAACATCAAGAAATAATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACTCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAAATGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTCCGTTACTCTTACTGGACTAGCAGCCAAAGCTATGTGATGACTAAAGGTTGGAGCCGCTTTGTTAAAGAGAAACGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGCGCCGCCCTCCTCACACGGCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTGTGGCGGTGGTGGTGGTGGTGGTTATGGTGGTTATGGTGGTGGTGGACAATTTCCTCCTTACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTTTTTTACCAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGTGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTTTTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCGTCTCAATTCTGTGTTTATAACGGAATGCCGATGTCGATGCCAACGAGCAATCCCGATGTACCGATCACGGACTTTTTCGAAAAAGGGAAGTCGTTAGATTTTGGCACTTGA 987 46.0 MDFGSSSRFHHQHQEIMEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWRRRPPHTAVETAFHHHGGGGCGGGGGGGYGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYQLRSPAALPGVDDGGGHGIGKAAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMPTSNPDVPITDFFEKGKSLDFGT 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3214566 3215552 - Cp4.1LG14g02110.1 Cpe14g00507 480891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00507 328 Gene3D - 26 148 IPR015300 -
Cpe14g00507 328 CDD B3_DNA 31 120 IPR003340 GO:0003677
Cpe14g00507 328 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 15 289 - -
Cpe14g00507 328 ProSiteProfiles B3 DNA-binding domain profile. 33 135 IPR003340 GO:0003677
Cpe14g00507 328 SMART B3_2 33 135 IPR003340 GO:0003677
Cpe14g00507 328 SUPERFAMILY DNA-binding pseudobarrel domain 30 126 IPR015300 -
Cpe14g00507 328 Pfam B3 DNA binding domain 33 134 IPR003340 GO:0003677
Cpe14g00507 328 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 15 289 IPR044800 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00992 Cpe14g00507 CCT
Cpe08g00992 Cpe14g00507 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00507 Cpe-Chr14:3214566 Cpe01g01350 Cpe-Chr1:8119732 3.05E-43 dispersed
Cpe05g00757 Cpe-Chr5:4687070 Cpe14g00507 Cpe-Chr14:3214566 1.81E-66 transposed
Cpe12g00470 Cpe-Chr12:4456795 Cpe14g00507 Cpe-Chr14:3214566 3.73E-69 transposed
Cpe17g00919 Cpe-Chr17:7125622 Cpe14g00507 Cpe-Chr14:3214566 3.23E-68 transposed
Cpe01g00663 Cpe-Chr1:3870288 Cpe14g00507 Cpe-Chr14:3214566 1.91E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50512 PF02362 B3 5.80E-27 CL0405 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00507 - - bhj:120090999 372.859