Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00538 ATGGCTACGTTCGTGGAGCCACCGAACGGAATCAGGTCATTGGGGAAGCATTATTACACAATGTGGCAAACTCTGTTTGAAATTGATATTAAGTATGTCCCAATCAAACCGATTGGGCGAGGAGCTTATGGTGTGGTGTGTTCTTCGATCAACCGAGAGACCAATGAAAAAGTGGCGATCAAGAAGATTCATAATGTGTTTGAGAATCGCACGGACGCCATGAGAACGCTGAGGGAGCTTAAGCTTCTGAGACATATTAGGCACGACAACGTTATTGCTTTGAAGGATGTAATGATGCCGATCCATAGAAAAAACTTTAAGGATGTGTATTTGGTTTATGAGCTCATGGATACGGATCTTCATCAGATTATCAAGTCTTCTCAGCCCCTTTCCAATGATCATTGCAAGTATTTTGCAAGTATTTTATCTATCAGAGGCAAAGATAATCAGCTGATGTTGCTTGATCTAACCAAGATGTTGCTTTGCGGGTTGCAATATCTTCATTCAGCGAATATTCTTCACCGGGATTTGAAGCCCGGGAACCTCCTCGTCAATGCTAACTGTGATCTGAAGATATGCGATTTTGGGTTGGCACGAACTAGCATGGGTCATGACCAGTTCATGACTGAGTATGTTGTCACTCGCTGGTATCGCGCACCAGAGCTTCTTCTCTGCTGTGACAACTATGGGACTTCTATTGATGTATGGTCGGTGGGCTGCATCTTTGCTGAGATTCTGGGTCGGCAGCCTATCTTCCCGGGGACGGAGTGCTTCAACCAACTCAACTTAATCATGAACATTCTCGGTTCTCCGAAGGAAGCTGATATCAAGTTCATCGACAATGCAAAAGCCAGAAAGTATATCAAGGGGATGCCGTTTTCAAGAGGAATAAACCTTTCACATCTATATCCACACGCCGAACCTTTAGCTCTAGACTTATTACAAAAGATGCTTGTGTTTGATCCAACTAAGAGAATTACAGTTGACGAAGCACTTCAACATCCATACATGTCGGGGCTATACGACCCAAAATTCAATCCTCCAGCCAATGTTCCCCTCACTCTCGACATCGAAGATTCACTCGAGGAGAACAAAATCAGGGAAATGATGTTGAACGAGATGCTCTATTACCATCCCGAAGCAGCATATTCTTGA 1155 43.81 MATFVEPPNGIRSLGKHYYTMWQTLFEIDIKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIHNVFENRTDAMRTLRELKLLRHIRHDNVIALKDVMMPIHRKNFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFASILSIRGKDNQLMLLDLTKMLLCGLQYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSMGHDQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRQPIFPGTECFNQLNLIMNILGSPKEADIKFIDNAKARKYIKGMPFSRGINLSHLYPHAEPLALDLLQKMLVFDPTKRITVDEALQHPYMSGLYDPKFNPPANVPLTLDIEDSLEENKIREMMLNEMLYYHPEAAYS 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3395247 3397761 + Cp4.1LG14g01800.1 Cpe14g00538 480922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00538 384 SMART serkin_6 32 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00538 384 Pfam Protein kinase domain 33 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00538 384 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 382 - -
Cpe14g00538 384 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Cpe14g00538 384 Gene3D Transferase(Phosphotransferase) domain 1 116 363 - -
Cpe14g00538 384 ProSiteProfiles Protein kinase domain profile. 32 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00538 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Cpe14g00538 384 Gene3D Phosphorylase Kinase; domain 1 19 371 - -
Cpe14g00538 384 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 382 - -
Cpe14g00538 384 SUPERFAMILY Protein kinase-like (PK-like) 31 344 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00638 Cpe14g00538 CCT
Cpe10g00638 Cpe14g00538 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00683 Cpe-Chr1:3979721 Cpe14g00538 Cpe-Chr14:3395247 0 dispersed
Cpe07g00399 Cpe-Chr7:2586999 Cpe14g00538 Cpe-Chr14:3395247 0 dispersed
Cpe11g00217 Cpe-Chr11:1168178 Cpe14g00538 Cpe-Chr14:3395247 0 dispersed
Cpe14g00538 Cpe-Chr14:3395247 Cpe13g00136 Cpe-Chr13:984706 1.00E-139 dispersed
Cpe01g00690 Cpe-Chr1:4004960 Cpe14g00538 Cpe-Chr14:3395247 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62834 PF00069 Pkinase 5.90E-66 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00538 K20537 - csv:101203896 676.781